RNA–Protein interactions for RNA: ENST00000396172.5

DDX39B-202, Transcript of DExD-box helicase 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39B, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-202ENST00000396172 KRTCAP3Q53RY4 240 aa8.91□□□□□ -0.98
DDX39B-202ENST00000396172 C1orf140Q5VVS0 124 aa8.91□□□□□ -0.98
DDX39B-202ENST00000396172 RPL13AP3Q6NVV1 102 aa8.91□□□□□ -0.98
DDX39B-202ENST00000396172 WDR88Q6ZMY6 472 aa8.91□□□□□ -0.98
DDX39B-202ENST00000396172 ZBTB49Q6ZSB9 765 aa8.91□□□□□ -0.98
DDX39B-202ENST00000396172 ESPNLQ6ZVH7 1005 aa8.91□□□□□ -0.98
DDX39B-202ENST00000396172 NRMQ8IXM6 262 aa8.91□□□□□ -0.98
DDX39B-202ENST00000396172 MEIOBQ8N635 442 aa8.91□□□□□ -0.98
DDX39B-202ENST00000396172 EXD3Q8N9H8 876 aa8.91□□□□□ -0.98
DDX39B-202ENST00000396172 ATG16L2Q8NAA4 619 aa8.91□□□□□ -0.98
DDX39B-202ENST00000396172 LSM14AQ8ND56 463 aaKnown RBP8.91□□□□□ -0.98
DDX39B-202ENST00000396172 GNPDA2Q8TDQ7 276 aa8.91□□□□□ -0.98
DDX39B-202ENST00000396172 ISOC1Q96CN7 298 aa8.91□□□□□ -0.98
DDX39B-202ENST00000396172 ZHX1-C8orf76Q96EF9 292 aa8.91□□□□□ -0.98
DDX39B-202ENST00000396172 SGTBQ96EQ0 304 aa8.91□□□□□ -0.98
DDX39B-202ENST00000396172 KLHL15Q96M94 604 aa8.91□□□□□ -0.98
DDX39B-202ENST00000396172 UBL7Q96S82 380 aaPredicted RBP8.91□□□□□ -0.98
DDX39B-202ENST00000396172 DGCR6LQ9BY27 220 aa8.91□□□□□ -0.98
DDX39B-202ENST00000396172 FKRPQ9H9S5 495 aa8.91□□□□□ -0.98
DDX39B-202ENST00000396172 TIGARQ9NQ88 270 aa8.91□□□□□ -0.98
DDX39B-202ENST00000396172 TBC1D23Q9NUY8 699 aa8.91□□□□□ -0.98
DDX39B-202ENST00000396172 POFUT2Q9Y2G5 429 aa8.91□□□□□ -0.98
DDX39B-202ENST00000396172 PHF3Q92576 2039 aaKnown RBP8.91□□□□□ -0.98
DDX39B-202ENST00000396172 LAMA5O15230 3695 aa8.91□□□□□ -0.98
DDX39B-202ENST00000396172 KPNA4O00629 521 aaPredicted RBP8.9□□□□□ -0.98
DDX39B-202ENST00000396172 AQP7O14520 342 aa8.9□□□□□ -0.98
DDX39B-202ENST00000396172 NPIPB7O75200 414 aa8.9□□□□□ -0.98
DDX39B-202ENST00000396172 HNRNPCP07910 306 aaKnown RBP eCLIP8.9□□□□□ -0.98
DDX39B-202ENST00000396172 MYF6P23409 242 aa8.9□□□□□ -0.98
DDX39B-202ENST00000396172 FPR3P25089 353 aa8.9□□□□□ -0.98
DDX39B-202ENST00000396172 ALDH3A2P51648 485 aa8.9□□□□□ -0.98
DDX39B-202ENST00000396172 IST1P53990 364 aa8.9□□□□□ -0.98
DDX39B-202ENST00000396172 RAD23AP54725 363 aa8.9□□□□□ -0.98
DDX39B-202ENST00000396172 RPS3AP61247 264 aaKnown RBP8.9□□□□□ -0.98
DDX39B-202ENST00000396172 COX10Q12887 443 aa8.9□□□□□ -0.98
DDX39B-202ENST00000396172 DAG1Q14118 895 aa8.9□□□□□ -0.98
DDX39B-202ENST00000396172 SEC23BQ15437 767 aa8.9□□□□□ -0.98
DDX39B-202ENST00000396172 C1orf94Q6P1W5 598 aa8.9□□□□□ -0.98
DDX39B-202ENST00000396172 PGBD2Q6P3X8 592 aa8.9□□□□□ -0.98
DDX39B-202ENST00000396172 ARHGAP11AQ6P4F7 1023 aa8.9□□□□□ -0.98
DDX39B-202ENST00000396172 TRILQ7L0X0 811 aa8.9□□□□□ -0.98
DDX39B-202ENST00000396172 GHDCQ8N2G8 530 aa8.9□□□□□ -0.98
DDX39B-202ENST00000396172 SLC43A2Q8N370 569 aa8.9□□□□□ -0.98
DDX39B-202ENST00000396172 AQP11Q8NBQ7 271 aa8.9□□□□□ -0.98
DDX39B-202ENST00000396172 MFSD8Q8NHS3 518 aa8.9□□□□□ -0.98
DDX39B-202ENST00000396172 SARAFQ96BY9 339 aa8.9□□□□□ -0.98
DDX39B-202ENST00000396172 C12orf43Q96C57 262 aaKnown RBP8.9□□□□□ -0.98
DDX39B-202ENST00000396172 BPIFA2Q96DR5 249 aa8.9□□□□□ -0.98
DDX39B-202ENST00000396172 RDH12Q96NR8 316 aa8.9□□□□□ -0.98
DDX39B-202ENST00000396172 ASPNQ9BXN1 380 aa8.9□□□□□ -0.98
DDX39B-202ENST00000396172 SLC6A15Q9H2J7 730 aa8.9□□□□□ -0.98
DDX39B-202ENST00000396172 USE1Q9NZ43 259 aa8.9□□□□□ -0.98
DDX39B-202ENST00000396172 ZNF229Q9UJW7 825 aa8.9□□□□□ -0.98
DDX39B-202ENST00000396172 CORINQ9Y5Q5 1042 aa8.9□□□□□ -0.98
DDX39B-202ENST00000396172 ATMQ13315 3056 aa8.9□□□□□ -0.98
DDX39B-202ENST00000396172 DOCK7Q96N67 2140 aa8.9□□□□□ -0.98
DDX39B-202ENST00000396172 IGKV1D-42A0A075B6H8 117 aa8.9□□□□□ -0.99
DDX39B-202ENST00000396172 A0A1B0GVC2 190 aa8.9□□□□□ -0.99
DDX39B-202ENST00000396172 OR14I1A6ND48 311 aa8.9□□□□□ -0.99
DDX39B-202ENST00000396172 SHISA8B8ZZ34 492 aa8.9□□□□□ -0.99
DDX39B-202ENST00000396172 PMS2P2O95744 297 aa8.9□□□□□ -0.99
DDX39B-202ENST00000396172 HIST1H2ABP04908 130 aa8.9□□□□□ -0.99
DDX39B-202ENST00000396172 SAGP10523 405 aaPredicted RBP8.9□□□□□ -0.99
DDX39B-202ENST00000396172 CCNA2P20248 432 aa8.9□□□□□ -0.99
DDX39B-202ENST00000396172 CBLP22681 906 aa8.9□□□□□ -0.99
DDX39B-202ENST00000396172 FOXD4Q12950 439 aaPredicted RBP8.9□□□□□ -0.99
DDX39B-202ENST00000396172 PPP1R8Q12972 351 aaKnown RBP8.9□□□□□ -0.99
DDX39B-202ENST00000396172 TSPAN31Q12999 210 aa8.9□□□□□ -0.99
DDX39B-202ENST00000396172 SF3B4Q15427 424 aaKnown RBP eCLIP8.9□□□□□ -0.991e-7■■■■□ 26
DDX39B-202ENST00000396172 RNFT1Q5M7Z0 435 aa8.9□□□□□ -0.99
DDX39B-202ENST00000396172 OTUD3Q5T2D3 398 aaPredicted RBP8.9□□□□□ -0.99
DDX39B-202ENST00000396172 FAHD1Q6P587 224 aa8.9□□□□□ -0.99
DDX39B-202ENST00000396172 TMPRSS11FQ6ZWK6 438 aa8.9□□□□□ -0.99
DDX39B-202ENST00000396172 HIST3H2AQ7L7L0 130 aa8.9□□□□□ -0.99
DDX39B-202ENST00000396172 MAMDC2Q7Z304 686 aaPredicted RBP8.9□□□□□ -0.99
DDX39B-202ENST00000396172 TMEM179BQ7Z7N9 219 aa8.9□□□□□ -0.99
DDX39B-202ENST00000396172 CLVS1Q8IUQ0 354 aaPredicted RBP8.9□□□□□ -0.99
DDX39B-202ENST00000396172 SIAH3Q8IW03 269 aa8.9□□□□□ -0.99
DDX39B-202ENST00000396172 PM20D2Q8IYS1 436 aa8.9□□□□□ -0.99
DDX39B-202ENST00000396172 CBR4Q8N4T8 237 aa8.9□□□□□ -0.99
DDX39B-202ENST00000396172 C10orf53Q8N6V4 93 aa8.9□□□□□ -0.99
DDX39B-202ENST00000396172 Q8NA96 180 aa8.9□□□□□ -0.99
DDX39B-202ENST00000396172 OR9Q2Q8NGE9 314 aa8.9□□□□□ -0.99
DDX39B-202ENST00000396172 HIST1H2ACQ93077 130 aa8.9□□□□□ -0.99
DDX39B-202ENST00000396172 ZNF524Q96C55 264 aa8.9□□□□□ -0.99
DDX39B-202ENST00000396172 FAM46AQ96IP4 442 aaKnown RBP8.9□□□□□ -0.99
DDX39B-202ENST00000396172 OR5B2Q96R09 309 aa8.9□□□□□ -0.99
DDX39B-202ENST00000396172 TAAR6Q96RI8 345 aa8.9□□□□□ -0.99
DDX39B-202ENST00000396172 TUBA1CQ9BQE3 449 aa8.9□□□□□ -0.99
DDX39B-202ENST00000396172 DEFB127Q9H1M4 99 aa8.9□□□□□ -0.99
DDX39B-202ENST00000396172 NANSQ9NR45 359 aa8.9□□□□□ -0.99
DDX39B-202ENST00000396172 PLSCR2Q9NRY7 297 aa8.9□□□□□ -0.99
DDX39B-202ENST00000396172 KRT84Q9NSB2 600 aa8.9□□□□□ -0.99
DDX39B-202ENST00000396172 ALKBH4Q9NXW9 302 aa8.9□□□□□ -0.99
DDX39B-202ENST00000396172 BLOC1S6Q9UL45 172 aa8.9□□□□□ -0.99
DDX39B-202ENST00000396172 PAIP2BQ9ULR5 123 aaKnown RBP8.9□□□□□ -0.99
DDX39B-202ENST00000396172 TRAPPC4Q9Y296 219 aa8.9□□□□□ -0.99
DDX39B-202ENST00000396172 ZNF337Q9Y3M9 751 aa8.9□□□□□ -0.99
DDX39B-202ENST00000396172 COL6A6A6NMZ7 2263 aa8.9□□□□□ -0.99
DDX39B-202ENST00000396172 ZZEF1O43149 2961 aa8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms