RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 OR6M1Q8NGM8 313 aa9.73□□□□□ -0.85
CALD1-203ENST00000393118 NANPQ8TBE9 248 aa9.73□□□□□ -0.85
CALD1-203ENST00000393118 DIO2Q92813 273 aa9.73□□□□□ -0.85
CALD1-203ENST00000393118 S100PBPQ96BU1 408 aa9.73□□□□□ -0.85
CALD1-203ENST00000393118 SLC6A18Q96N87 628 aa9.73□□□□□ -0.85
CALD1-203ENST00000393118 TAPBPLQ9BX59 468 aa9.73□□□□□ -0.85
CALD1-203ENST00000393118 MS4A7Q9GZW8 240 aaPredicted RBP9.73□□□□□ -0.85
CALD1-203ENST00000393118 NIT2Q9NQR4 276 aa9.73□□□□□ -0.85
CALD1-203ENST00000393118 C20orf141Q9NUB4 165 aa9.73□□□□□ -0.85
CALD1-203ENST00000393118 LAMP5Q9UJQ1 280 aa9.73□□□□□ -0.85
CALD1-203ENST00000393118 HEATR5BQ9P2D3 2071 aa9.73□□□□□ -0.85
CALD1-203ENST00000393118 ANAPC1Q9H1A4 1944 aa9.73□□□□□ -0.85
CALD1-203ENST00000393118 CDC42EP2O14613 210 aa9.73□□□□□ -0.85
CALD1-203ENST00000393118 SURF4O15260 269 aa9.73□□□□□ -0.85
CALD1-203ENST00000393118 RNF13O43567 381 aa9.73□□□□□ -0.85
CALD1-203ENST00000393118 TBX6O95947 436 aaPredicted RBP9.73□□□□□ -0.85
CALD1-203ENST00000393118 CPEP16870 476 aa9.73□□□□□ -0.85
CALD1-203ENST00000393118 BTG2P78543 158 aa9.73□□□□□ -0.85
CALD1-203ENST00000393118 EXOSC2Q13868 293 aaKnown RBP9.73□□□□□ -0.85
CALD1-203ENST00000393118 GAS6Q14393 721 aa9.73□□□□□ -0.85
CALD1-203ENST00000393118 C21orf62-AS1Q17RA5 79 aa9.73□□□□□ -0.85
CALD1-203ENST00000393118 SSX6Q7RTT6 188 aa9.73□□□□□ -0.85
CALD1-203ENST00000393118 COMTD1Q86VU5 262 aa9.73□□□□□ -0.85
CALD1-203ENST00000393118 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.73□□□□□ -0.85
CALD1-203ENST00000393118 ZFP82Q8N141 532 aa9.73□□□□□ -0.85
CALD1-203ENST00000393118 NSMAFQ92636 917 aa9.73□□□□□ -0.85
CALD1-203ENST00000393118 NKD1Q969G9 470 aa9.73□□□□□ -0.85
CALD1-203ENST00000393118 DCLRE1CQ96SD1 692 aaKnown RBP9.73□□□□□ -0.85
CALD1-203ENST00000393118 NMNAT3Q96T66 252 aa9.73□□□□□ -0.85
CALD1-203ENST00000393118 MCOLN1Q9GZU1 580 aa9.73□□□□□ -0.85
CALD1-203ENST00000393118 COMMD4Q9H0A8 199 aa9.73□□□□□ -0.85
CALD1-203ENST00000393118 LMAN1LQ9HAT1 526 aa9.73□□□□□ -0.85
CALD1-203ENST00000393118 SLC2A4RGQ9NR83 387 aa9.73□□□□□ -0.85
CALD1-203ENST00000393118 TESQ9UGI8 421 aaKnown RBP9.73□□□□□ -0.85
CALD1-203ENST00000393118 CDHR4A6H8M9 788 aa9.72□□□□□ -0.85
CALD1-203ENST00000393118 C5orf67F2Z3F1 127 aa9.72□□□□□ -0.85
CALD1-203ENST00000393118 CDC40O60508 579 aaKnown RBP eCLIP9.72□□□□□ -0.85
CALD1-203ENST00000393118 GATBO75879 557 aaKnown RBP9.72□□□□□ -0.85
CALD1-203ENST00000393118 TRAPPC2P0DI81 140 aa9.72□□□□□ -0.85
CALD1-203ENST00000393118 TRAPPC2BP0DI82 140 aa9.72□□□□□ -0.85
CALD1-203ENST00000393118 GABRB1P18505 474 aa9.72□□□□□ -0.85
CALD1-203ENST00000393118 TOMM20Q15388 145 aa9.72□□□□□ -0.85
CALD1-203ENST00000393118 ZIC1Q15915 447 aa9.72□□□□□ -0.85
CALD1-203ENST00000393118 ZNF770Q6IQ21 691 aaPredicted RBP9.72□□□□□ -0.85
CALD1-203ENST00000393118 TMEM81Q6P7N7 255 aa9.72□□□□□ -0.85
CALD1-203ENST00000393118 ULK3Q6PHR2 472 aa9.72□□□□□ -0.85
CALD1-203ENST00000393118 TMEM92Q6UXU6 159 aa9.72□□□□□ -0.85
CALD1-203ENST00000393118 Q6ZS52 159 aa9.72□□□□□ -0.85
CALD1-203ENST00000393118 C19orf47Q8N9M1 422 aaKnown RBP9.72□□□□□ -0.85
CALD1-203ENST00000393118 TNFAIP8L1Q8WVP5 186 aa9.72□□□□□ -0.85
CALD1-203ENST00000393118 THAP4Q8WY91 577 aa9.72□□□□□ -0.85
CALD1-203ENST00000393118 GHSRQ92847 366 aa9.72□□□□□ -0.85
CALD1-203ENST00000393118 OR2A5Q96R48 311 aa9.72□□□□□ -0.85
CALD1-203ENST00000393118 ADAM18Q9Y3Q7 739 aa9.72□□□□□ -0.85
CALD1-203ENST00000393118 CENPVL1A0A0U1RR11 272 aa9.72□□□□□ -0.85
CALD1-203ENST00000393118 IQCMA0A1B0GVH7 501 aa9.72□□□□□ -0.85
CALD1-203ENST00000393118 H7C1C5 153 aa9.72□□□□□ -0.85
CALD1-203ENST00000393118 TO15178 435 aa9.72□□□□□ -0.85
CALD1-203ENST00000393118 ITGA10O75578 1167 aa9.72□□□□□ -0.85
CALD1-203ENST00000393118 RP2O75695 350 aa9.72□□□□□ -0.85
CALD1-203ENST00000393118 TACSTD2P09758 323 aa9.72□□□□□ -0.85
CALD1-203ENST00000393118 KIR2DL1P43626 348 aaPredicted RBP9.72□□□□□ -0.85
CALD1-203ENST00000393118 RAB38P57729 211 aa9.72□□□□□ -0.85
CALD1-203ENST00000393118 LCN6P62502 163 aa9.72□□□□□ -0.85
CALD1-203ENST00000393118 CDK5Q00535 292 aa9.72□□□□□ -0.85
CALD1-203ENST00000393118 PRAMEF8Q5VWM4 474 aa9.72□□□□□ -0.85
CALD1-203ENST00000393118 PRAMEF7Q5VXH5 474 aa9.72□□□□□ -0.85
CALD1-203ENST00000393118 NKAIN2Q5VXU1 208 aa9.72□□□□□ -0.85
CALD1-203ENST00000393118 ZNF425Q6IV72 752 aa9.72□□□□□ -0.85
CALD1-203ENST00000393118 TRMT61AQ96FX7 289 aaKnown RBP9.72□□□□□ -0.85
CALD1-203ENST00000393118 B3GNT4Q9C0J1 378 aa9.72□□□□□ -0.85
CALD1-203ENST00000393118 NRSN2Q9GZP1 204 aa9.72□□□□□ -0.85
CALD1-203ENST00000393118 LIN7BQ9HAP6 207 aa9.72□□□□□ -0.85
CALD1-203ENST00000393118 DUSP22Q9NRW4 184 aa9.72□□□□□ -0.85
CALD1-203ENST00000393118 CENPMQ9NSP4 180 aa9.72□□□□□ -0.85
CALD1-203ENST00000393118 SDHAF2Q9NX18 166 aa9.72□□□□□ -0.85
CALD1-203ENST00000393118 DHCR7Q9UBM7 475 aaKnown RBP9.72□□□□□ -0.85
CALD1-203ENST00000393118 SIX6O95475 246 aa9.72□□□□□ -0.85
CALD1-203ENST00000393118 LIMS3P0CW19 117 aa9.72□□□□□ -0.85
CALD1-203ENST00000393118 LIMS4P0CW20 117 aa9.72□□□□□ -0.85
CALD1-203ENST00000393118 MAKP20794 623 aa9.72□□□□□ -0.85
CALD1-203ENST00000393118 NR0B1P51843 470 aaKnown RBP9.72□□□□□ -0.85
CALD1-203ENST00000393118 GAB4Q2WGN9 574 aa9.72□□□□□ -0.85
CALD1-203ENST00000393118 SLC25A25Q6KCM7 469 aa9.72□□□□□ -0.85
CALD1-203ENST00000393118 C3P1Q6ZMU1 363 aa9.72□□□□□ -0.85
CALD1-203ENST00000393118 SLC29A4Q7RTT9 530 aa9.72□□□□□ -0.85
CALD1-203ENST00000393118 CCDC190Q86UF4 302 aa9.72□□□□□ -0.85
CALD1-203ENST00000393118 TMEM151BQ8IW70 566 aa9.72□□□□□ -0.85
CALD1-203ENST00000393118 PDZD9Q8IXQ8 264 aa9.72□□□□□ -0.85
CALD1-203ENST00000393118 MS4A15Q8N5U1 240 aa9.72□□□□□ -0.85
CALD1-203ENST00000393118 SIRT6Q8N6T7 355 aa9.72□□□□□ -0.85
CALD1-203ENST00000393118 LINC00469Q8N7U9 141 aa9.72□□□□□ -0.85
CALD1-203ENST00000393118 MORN4Q8NDC4 146 aa9.72□□□□□ -0.85
CALD1-203ENST00000393118 BAHD1Q8TBE0 780 aaPredicted RBP9.72□□□□□ -0.85
CALD1-203ENST00000393118 MSLNLQ96KJ4 702 aa9.72□□□□□ -0.85
CALD1-203ENST00000393118 TEAD3Q99594 435 aa9.72□□□□□ -0.85
CALD1-203ENST00000393118 TREM1Q9NP99 234 aa9.72□□□□□ -0.85
CALD1-203ENST00000393118 CBLCQ9ULV8 474 aa9.72□□□□□ -0.85
CALD1-203ENST00000393118 TMEM229AB2RXF0 380 aa9.71□□□□□ -0.85
CALD1-203ENST00000393118 SOX1O00570 391 aaPredicted RBP9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms