RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 DEFB133Q30KQ1 61 aa12.2□□□□□ -0.46
LCA5-202ENST00000392959 PRR18Q8N4B5 295 aa12.2□□□□□ -0.46
LCA5-202ENST00000392959 SUMF2Q8NBJ7 301 aa12.2□□□□□ -0.46
LCA5-202ENST00000392959 OR52N1Q8NH53 320 aa12.2□□□□□ -0.46
LCA5-202ENST00000392959 TM4SF18Q96CE8 201 aa12.2□□□□□ -0.46
LCA5-202ENST00000392959 AMDHD1Q96NU7 426 aa12.2□□□□□ -0.46
LCA5-202ENST00000392959 CA14Q9ULX7 337 aa12.2□□□□□ -0.46
LCA5-202ENST00000392959 CAMK2AQ9UQM7 478 aa12.2□□□□□ -0.46
LCA5-202ENST00000392959 TP53TG5Q9Y2B4 290 aa12.2□□□□□ -0.46
LCA5-202ENST00000392959 OR6C6A6NF89 314 aa12.2□□□□□ -0.46
LCA5-202ENST00000392959 LILRB5O75023 590 aa12.2□□□□□ -0.46
LCA5-202ENST00000392959 IGHG1P01857 330 aa12.2□□□□□ -0.46
LCA5-202ENST00000392959 FPR3P25089 353 aa12.2□□□□□ -0.46
LCA5-202ENST00000392959 DCAF7P61962 342 aa12.2□□□□□ -0.46
LCA5-202ENST00000392959 RPL23AP62750 156 aaKnown RBP12.2□□□□□ -0.46
LCA5-202ENST00000392959 FOXK1P85037 733 aa12.2□□□□□ -0.46
LCA5-202ENST00000392959 RBM39Q14498 530 aaKnown RBP12.2□□□□□ -0.46
LCA5-202ENST00000392959 MPEG1Q2M385 716 aa12.2□□□□□ -0.46
LCA5-202ENST00000392959 ABHD17BQ5VST6 288 aa12.2□□□□□ -0.46
LCA5-202ENST00000392959 OR5M10Q6IEU7 315 aa12.2□□□□□ -0.46
LCA5-202ENST00000392959 SLC35D2Q76EJ3 337 aa12.2□□□□□ -0.46
LCA5-202ENST00000392959 CHTF18Q8WVB6 975 aa12.2□□□□□ -0.46
LCA5-202ENST00000392959 MS4A4AQ96JQ5 239 aa12.2□□□□□ -0.46
LCA5-202ENST00000392959 KIF25Q9UIL4 384 aa12.2□□□□□ -0.46
LCA5-202ENST00000392959 LCMT2O60294 686 aaKnown RBP12.19□□□□□ -0.46
LCA5-202ENST00000392959 GALR3O60755 368 aaPredicted RBP12.19□□□□□ -0.46
LCA5-202ENST00000392959 TGM6O95932 706 aa12.19□□□□□ -0.46
LCA5-202ENST00000392959 MT-CO2P00403 227 aa12.19□□□□□ -0.46
LCA5-202ENST00000392959 CHRM4P08173 479 aa12.19□□□□□ -0.46
LCA5-202ENST00000392959 SERPINA2P20848 420 aa12.19□□□□□ -0.46
LCA5-202ENST00000392959 RPS19P39019 145 aaKnown RBP12.19□□□□□ -0.46
LCA5-202ENST00000392959 PFN3P60673 137 aa12.19□□□□□ -0.46
LCA5-202ENST00000392959 ERV3-1Q14264 604 aa12.19□□□□□ -0.46
LCA5-202ENST00000392959 NFATC4Q14934 902 aa12.19□□□□□ -0.46
LCA5-202ENST00000392959 EXOSC6Q5RKV6 272 aaKnown RBP12.19□□□□□ -0.46
LCA5-202ENST00000392959 GPR155Q7Z3F1 870 aa12.19□□□□□ -0.46
LCA5-202ENST00000392959 TECPR1Q7Z6L1 1165 aa12.19□□□□□ -0.46
LCA5-202ENST00000392959 SIAH3Q8IW03 269 aa12.19□□□□□ -0.46
LCA5-202ENST00000392959 ABHD5Q8WTS1 349 aa12.19□□□□□ -0.46
LCA5-202ENST00000392959 SLC7A6Q92536 515 aa12.19□□□□□ -0.46
LCA5-202ENST00000392959 SEMA4GQ9NTN9 838 aa12.19□□□□□ -0.46
LCA5-202ENST00000392959 RLIMQ9NVW2 624 aa12.19□□□□□ -0.46
LCA5-202ENST00000392959 ASCC3Q8N3C0 2202 aaKnown RBP12.19□□□□□ -0.46
LCA5-202ENST00000392959 BLACEA4D250 179 aa12.19□□□□□ -0.46
LCA5-202ENST00000392959 SLCO2B1O94956 709 aa12.19□□□□□ -0.46
LCA5-202ENST00000392959 OPN1LWP04000 364 aa12.19□□□□□ -0.46
LCA5-202ENST00000392959 ZNF28P17035 718 aa12.19□□□□□ -0.46
LCA5-202ENST00000392959 SNRPGP62308 76 aaKnown RBP12.19□□□□□ -0.46
LCA5-202ENST00000392959 ZNF169Q14929 603 aaPredicted RBP12.19□□□□□ -0.46
LCA5-202ENST00000392959 SLC22A25Q6T423 547 aa12.19□□□□□ -0.46
LCA5-202ENST00000392959 DPY19L4Q7Z388 723 aa12.19□□□□□ -0.46
LCA5-202ENST00000392959 OR13C9Q8NGT0 318 aa12.19□□□□□ -0.46
LCA5-202ENST00000392959 SEC22AQ96IW7 307 aa12.19□□□□□ -0.46
LCA5-202ENST00000392959 A0A1B0GWA3 101 aa12.19□□□□□ -0.46
LCA5-202ENST00000392959 B4DXG7 233 aa12.19□□□□□ -0.46
LCA5-202ENST00000392959 ZNF593O00488 134 aaPredicted RBP12.19□□□□□ -0.46
LCA5-202ENST00000392959 PRICKLE3O43900 615 aaPredicted RBP12.19□□□□□ -0.46
LCA5-202ENST00000392959 NPPBP16860 134 aa12.19□□□□□ -0.46
LCA5-202ENST00000392959 VEGFCP49767 419 aa12.19□□□□□ -0.46
LCA5-202ENST00000392959 EFNA3P52797 238 aa12.19□□□□□ -0.46
LCA5-202ENST00000392959 LTB4RQ15722 352 aa12.19□□□□□ -0.46
LCA5-202ENST00000392959 FAM71E1Q6IPT2 247 aa12.19□□□□□ -0.46
LCA5-202ENST00000392959 ZNF595Q8IYB9 648 aa12.19□□□□□ -0.46
LCA5-202ENST00000392959 ZNF454Q8N9F8 522 aa12.19□□□□□ -0.46
LCA5-202ENST00000392959 PPP1R35Q8TAP8 253 aa12.19□□□□□ -0.46
LCA5-202ENST00000392959 SLAMF9Q96A28 289 aa12.19□□□□□ -0.46
LCA5-202ENST00000392959 NMNAT3Q96T66 252 aa12.19□□□□□ -0.46
LCA5-202ENST00000392959 SLC38A1Q9H2H9 487 aa12.19□□□□□ -0.46
LCA5-202ENST00000392959 UBQLN3Q9H347 655 aa12.19□□□□□ -0.46
LCA5-202ENST00000392959 SPATA6Q9NWH7 488 aaPredicted RBP12.19□□□□□ -0.46
LCA5-202ENST00000392959 FBXO7Q9Y3I1 522 aa12.19□□□□□ -0.46
LCA5-202ENST00000392959 NPFFR2Q9Y5X5 522 aa12.19□□□□□ -0.46
LCA5-202ENST00000392959 KIAA0100Q14667 2235 aaKnown RBP12.19□□□□□ -0.46
LCA5-202ENST00000392959 RFXAPO00287 272 aa12.19□□□□□ -0.46
LCA5-202ENST00000392959 SURF4O15260 269 aa12.19□□□□□ -0.46
LCA5-202ENST00000392959 CPNE6O95741 557 aa12.19□□□□□ -0.46
LCA5-202ENST00000392959 TRIM23P36406 574 aa12.19□□□□□ -0.46
LCA5-202ENST00000392959 REEP5Q00765 189 aa12.19□□□□□ -0.46
LCA5-202ENST00000392959 CREB3L2Q70SY1 520 aa12.19□□□□□ -0.46
LCA5-202ENST00000392959 TRAPPC6BQ86SZ2 158 aa12.19□□□□□ -0.46
LCA5-202ENST00000392959 MKXQ8IYA7 352 aa12.19□□□□□ -0.46
LCA5-202ENST00000392959 TMEFF1Q8IYR6 380 aa12.19□□□□□ -0.46
LCA5-202ENST00000392959 OR4D6Q8NGJ1 314 aa12.19□□□□□ -0.46
LCA5-202ENST00000392959 OR14A2Q96R54 314 aa12.19□□□□□ -0.46
LCA5-202ENST00000392959 TCEAL7Q9BRU2 100 aa12.19□□□□□ -0.46
LCA5-202ENST00000392959 ANKRD19PQ9H560 264 aa12.19□□□□□ -0.46
LCA5-202ENST00000392959 CROCCQ5TZA2 2017 aa12.19□□□□□ -0.46
LCA5-202ENST00000392959 RGPD2P0DJD1 1756 aa12.18□□□□□ -0.46
LCA5-202ENST00000392959 GPR137BO60478 399 aa12.18□□□□□ -0.46
LCA5-202ENST00000392959 CD79AP11912 226 aa12.18□□□□□ -0.46
LCA5-202ENST00000392959 MMP11P24347 488 aa12.18□□□□□ -0.46
LCA5-202ENST00000392959 CHATP28329 748 aa12.18□□□□□ -0.46
LCA5-202ENST00000392959 HTR2CP28335 458 aa12.18□□□□□ -0.46
LCA5-202ENST00000392959 RAB38P57729 211 aa12.18□□□□□ -0.46
LCA5-202ENST00000392959 OXA1LQ15070 435 aa12.18□□□□□ -0.46
LCA5-202ENST00000392959 RTL10Q7L3V2 364 aa12.18□□□□□ -0.46
LCA5-202ENST00000392959 LILRA3Q8N6C8 439 aaPredicted RBP12.18□□□□□ -0.46
LCA5-202ENST00000392959 PHYHIPQ92561 330 aa12.18□□□□□ -0.46
LCA5-202ENST00000392959 SLC25A31Q9H0C2 315 aa12.18□□□□□ -0.46
LCA5-202ENST00000392959 B3GNT2Q9NY97 397 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms