RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 PCDHGA6Q9Y5G7 932 aa17.48■□□□□ 0.39
CCDC50-202ENST00000392456 PCDHGA5Q9Y5G8 931 aa17.48■□□□□ 0.39
CCDC50-202ENST00000392456 PCDHGA1Q9Y5H4 931 aa17.48■□□□□ 0.39
CCDC50-202ENST00000392456 CLDN4O14493 209 aa17.48■□□□□ 0.39
CCDC50-202ENST00000392456 LGI1O95970 557 aa17.48■□□□□ 0.39
CCDC50-202ENST00000392456 RD3LP0DJH9 198 aa17.48■□□□□ 0.39
CCDC50-202ENST00000392456 AVPR2P30518 371 aa17.48■□□□□ 0.39
CCDC50-202ENST00000392456 CALCRP30988 508 aa17.48■□□□□ 0.39
CCDC50-202ENST00000392456 AVPI1Q5T686 147 aa17.48■□□□□ 0.39
CCDC50-202ENST00000392456 PRAMEF17Q5VTA0 474 aa17.48■□□□□ 0.39
CCDC50-202ENST00000392456 TCEAL6Q6IPX3 200 aa17.48■□□□□ 0.39
CCDC50-202ENST00000392456 TMEM88Q6PEY1 159 aa17.48■□□□□ 0.39
CCDC50-202ENST00000392456 C6orf120Q7Z4R8 191 aa17.48■□□□□ 0.39
CCDC50-202ENST00000392456 EID2Q8N6I1 236 aa17.48■□□□□ 0.39
CCDC50-202ENST00000392456 OR4C6Q8NH72 309 aa17.48■□□□□ 0.39
CCDC50-202ENST00000392456 OR1S1Q8NH92 325 aa17.48■□□□□ 0.39
CCDC50-202ENST00000392456 CA5BP1Q8WTZ4 195 aa17.48■□□□□ 0.39
CCDC50-202ENST00000392456 MGLLQ99685 303 aa17.48■□□□□ 0.39
CCDC50-202ENST00000392456 NLNQ9BYT8 704 aa17.48■□□□□ 0.39
CCDC50-202ENST00000392456 ZSCAN32Q9NX65 697 aa17.48■□□□□ 0.39
CCDC50-202ENST00000392456 SCP2D1Q9UJQ7 156 aa17.48■□□□□ 0.39
CCDC50-202ENST00000392456 ASCC3Q8N3C0 2202 aaKnown RBP17.48■□□□□ 0.39
CCDC50-202ENST00000392456 MEIKINA0A087WXM9 373 aa17.47■□□□□ 0.39
CCDC50-202ENST00000392456 C9orf170A2RU37 121 aa17.47■□□□□ 0.39
CCDC50-202ENST00000392456 FOXS1O43638 330 aa17.47■□□□□ 0.39
CCDC50-202ENST00000392456 LDB3O75112 727 aa17.47■□□□□ 0.39
CCDC50-202ENST00000392456 CRYBA1P05813 215 aa17.47■□□□□ 0.39
CCDC50-202ENST00000392456 RAB4BP61018 213 aa17.47■□□□□ 0.39
CCDC50-202ENST00000392456 SHC2P98077 582 aa17.47■□□□□ 0.39
CCDC50-202ENST00000392456 MC2RQ01718 297 aa17.47■□□□□ 0.39
CCDC50-202ENST00000392456 LAPTM4AQ15012 233 aa17.47■□□□□ 0.39
CCDC50-202ENST00000392456 MANEAQ5SRI9 462 aa17.47■□□□□ 0.39
CCDC50-202ENST00000392456 SZRD1Q7Z422 152 aa17.47■□□□□ 0.39
CCDC50-202ENST00000392456 METTL27Q8N6F8 245 aaPredicted RBP17.47■□□□□ 0.39
CCDC50-202ENST00000392456 HORMAD2Q8N7B1 307 aa17.47■□□□□ 0.39
CCDC50-202ENST00000392456 OR9A2Q8NGT5 310 aa17.47■□□□□ 0.39
CCDC50-202ENST00000392456 RAB8BQ92930 207 aa17.47■□□□□ 0.39
CCDC50-202ENST00000392456 AMBNQ9NP70 447 aa17.47■□□□□ 0.39
CCDC50-202ENST00000392456 TMEM184BQ9Y519 407 aaPredicted RBP17.47■□□□□ 0.39
CCDC50-202ENST00000392456 OR2W5A6NFC9 320 aa17.47■□□□□ 0.39
CCDC50-202ENST00000392456 CYR61O00622 381 aa17.47■□□□□ 0.39
CCDC50-202ENST00000392456 C4BPBP20851 252 aa17.47■□□□□ 0.39
CCDC50-202ENST00000392456 KDELR2P33947 212 aa17.47■□□□□ 0.39
CCDC50-202ENST00000392456 GABREP78334 506 aa17.47■□□□□ 0.39
CCDC50-202ENST00000392456 FAM198BQ6UWH4 519 aa17.47■□□□□ 0.39
CCDC50-202ENST00000392456 CA13Q8N1Q1 262 aa17.47■□□□□ 0.39
CCDC50-202ENST00000392456 NEURL3Q96EH8 262 aa17.47■□□□□ 0.39
CCDC50-202ENST00000392456 DMRTA2Q96SC8 542 aa17.47■□□□□ 0.39
CCDC50-202ENST00000392456 SSX3Q99909 188 aa17.47■□□□□ 0.39
CCDC50-202ENST00000392456 SOSTQ9BQB4 213 aa17.47■□□□□ 0.39
CCDC50-202ENST00000392456 RNF32Q9H0A6 362 aa17.47■□□□□ 0.39
CCDC50-202ENST00000392456 NEUROD4Q9HD90 331 aa17.47■□□□□ 0.39
CCDC50-202ENST00000392456 PDE7BQ9NP56 450 aa17.47■□□□□ 0.39
CCDC50-202ENST00000392456 C5orf52A6NGY3 159 aa17.46■□□□□ 0.39
CCDC50-202ENST00000392456 ZNF670-ZNF695F2Z2N8 137 aa17.46■□□□□ 0.39
CCDC50-202ENST00000392456 SRPX2O60687 465 aaPredicted RBP17.46■□□□□ 0.39
CCDC50-202ENST00000392456 HOXB6P17509 224 aaKnown RBP17.46■□□□□ 0.39
CCDC50-202ENST00000392456 PPIBP23284 216 aaKnown RBP17.46■□□□□ 0.39
CCDC50-202ENST00000392456 SOX18P35713 384 aa17.46■□□□□ 0.39
CCDC50-202ENST00000392456 CD79BP40259 229 aa17.46■□□□□ 0.39
CCDC50-202ENST00000392456 BUD31P41223 144 aaPredicted RBP17.46■□□□□ 0.39
CCDC50-202ENST00000392456 GPR3P46089 330 aa17.46■□□□□ 0.39
CCDC50-202ENST00000392456 PRKAG1P54619 331 aa17.46■□□□□ 0.39
CCDC50-202ENST00000392456 MAT1AQ00266 395 aaKnown RBP17.46■□□□□ 0.39
CCDC50-202ENST00000392456 DDI2Q5TDH0 399 aa17.46■□□□□ 0.39
CCDC50-202ENST00000392456 VTCN1Q7Z7D3 282 aa17.46■□□□□ 0.39
CCDC50-202ENST00000392456 MOSPD2Q8NHP6 518 aa17.46■□□□□ 0.39
CCDC50-202ENST00000392456 SCARB1Q8WTV0 552 aa17.46■□□□□ 0.39
CCDC50-202ENST00000392456 KAT2AQ92830 837 aa17.46■□□□□ 0.39
CCDC50-202ENST00000392456 COL26A1Q96A83 441 aa17.46■□□□□ 0.39
CCDC50-202ENST00000392456 TMEM229AB2RXF0 380 aa17.46■□□□□ 0.39
CCDC50-202ENST00000392456 DUX1O43812 170 aa17.46■□□□□ 0.39
CCDC50-202ENST00000392456 CBR1P16152 277 aa17.46■□□□□ 0.39
CCDC50-202ENST00000392456 NTSP30990 170 aa17.46■□□□□ 0.39
CCDC50-202ENST00000392456 MAGEA2P43356 314 aa17.46■□□□□ 0.39
CCDC50-202ENST00000392456 MLC1Q15049 377 aa17.46■□□□□ 0.39
CCDC50-202ENST00000392456 HSDL2Q6YN16 418 aa17.46■□□□□ 0.39
CCDC50-202ENST00000392456 ZNF574Q6ZN55 896 aaPredicted RBP17.46■□□□□ 0.39
CCDC50-202ENST00000392456 NFKBIDQ8NI38 313 aa17.46■□□□□ 0.39
CCDC50-202ENST00000392456 SLC25A46Q96AG3 418 aa17.46■□□□□ 0.39
CCDC50-202ENST00000392456 OTULINQ96BN8 352 aa17.46■□□□□ 0.39
CCDC50-202ENST00000392456 YIPF4Q9BSR8 244 aa17.46■□□□□ 0.39
CCDC50-202ENST00000392456 OR51J1Q9H342 316 aa17.46■□□□□ 0.39
CCDC50-202ENST00000392456 GPR83Q9NYM4 423 aa17.46■□□□□ 0.39
CCDC50-202ENST00000392456 ANXA2P2A6NMY6 339 aa17.45■□□□□ 0.38
CCDC50-202ENST00000392456 ZNF682O95780 498 aa17.45■□□□□ 0.38
CCDC50-202ENST00000392456 CSNK2A2P19784 350 aaPredicted RBP17.45■□□□□ 0.38
CCDC50-202ENST00000392456 SLC6A1P30531 599 aa17.45■□□□□ 0.38
CCDC50-202ENST00000392456 DOC2BQ14184 412 aa17.45■□□□□ 0.38
CCDC50-202ENST00000392456 CEBPEQ15744 281 aa17.45■□□□□ 0.38
CCDC50-202ENST00000392456 AARDQ4LEZ3 155 aa17.45■□□□□ 0.38
CCDC50-202ENST00000392456 ZNF628Q5EBL2 1059 aa17.45■□□□□ 0.38
CCDC50-202ENST00000392456 CEACAM20Q6UY09 585 aa17.45■□□□□ 0.38
CCDC50-202ENST00000392456 GDPGP1Q6ZNW5 385 aa17.45■□□□□ 0.38
CCDC50-202ENST00000392456 OR5D16Q8NGK9 328 aa17.45■□□□□ 0.38
CCDC50-202ENST00000392456 PYURFQ96I23 114 aa17.45■□□□□ 0.38
CCDC50-202ENST00000392456 PLEKHB1Q9UF11 243 aaPredicted RBP17.45■□□□□ 0.38
CCDC50-202ENST00000392456 STUB1Q9UNE7 303 aa17.45■□□□□ 0.38
CCDC50-202ENST00000392456 FAM86C2PA6NEL3 165 aa17.45■□□□□ 0.38
CCDC50-202ENST00000392456 CHST10O43529 356 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms