RNA–Protein interactions for RNA: ENST00000392351.7

HOMER3-202, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,557 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-202ENST00000392351 FTCDNL1E5RQL4 147 aa22.7■■□□□ 1.22
HOMER3-202ENST00000392351 SMAD9O15198 467 aaKnown RBP22.7■■□□□ 1.22
HOMER3-202ENST00000392351 IL2RAP01589 272 aa22.7■■□□□ 1.22
HOMER3-202ENST00000392351 RRM2P31350 389 aa22.7■■□□□ 1.22
HOMER3-202ENST00000392351 C10orf53Q8N6V4 93 aa22.7■■□□□ 1.22
HOMER3-202ENST00000392351 SLC7A13Q8TCU3 470 aa22.7■■□□□ 1.22
HOMER3-202ENST00000392351 CCM2LQ9NUG4 571 aaPredicted RBP22.7■■□□□ 1.22
HOMER3-202ENST00000392351 MED31Q9Y3C7 131 aa22.7■■□□□ 1.22
HOMER3-202ENST00000392351 USP9XQ93008 2570 aaPredicted RBP22.69■■□□□ 1.22
HOMER3-202ENST00000392351 EIF1BO60739 113 aaKnown RBP22.69■■□□□ 1.22
HOMER3-202ENST00000392351 GADD45GO95257 159 aa22.69■■□□□ 1.22
HOMER3-202ENST00000392351 CBLP22681 906 aa22.69■■□□□ 1.22
HOMER3-202ENST00000392351 GTF2E2P29084 291 aaKnown RBP22.69■■□□□ 1.22
HOMER3-202ENST00000392351 AGFG1P52594 562 aaKnown RBP22.69■■□□□ 1.22
HOMER3-202ENST00000392351 PER3P56645 1201 aa22.69■■□□□ 1.22
HOMER3-202ENST00000392351 SMIM11AP58511 58 aa22.69■■□□□ 1.22
HOMER3-202ENST00000392351 KPNB1Q14974 876 aaKnown RBP22.69■■□□□ 1.22
HOMER3-202ENST00000392351 MTFR2Q6P444 385 aa22.69■■□□□ 1.22
HOMER3-202ENST00000392351 ZNF730Q6ZMV8 503 aa22.69■■□□□ 1.22
HOMER3-202ENST00000392351 RNF128Q8TEB7 428 aa22.69■■□□□ 1.22
HOMER3-202ENST00000392351 ACOT11Q8WXI4 607 aaPredicted RBP22.69■■□□□ 1.22
HOMER3-202ENST00000392351 RND1Q92730 232 aa22.69■■□□□ 1.22
HOMER3-202ENST00000392351 SLCO4A1Q96BD0 722 aa22.69■■□□□ 1.22
HOMER3-202ENST00000392351 KLHL4Q9C0H6 718 aa22.69■■□□□ 1.22
HOMER3-202ENST00000392351 RNF122Q9H9V4 155 aa22.69■■□□□ 1.22
HOMER3-202ENST00000392351 A0A087WUU8 490 aa22.68■■□□□ 1.22
HOMER3-202ENST00000392351 TRBV4-1A0A0J9YWV2 114 aa22.68■■□□□ 1.22
HOMER3-202ENST00000392351 ENO4A6NNW6 628 aa22.68■■□□□ 1.22
HOMER3-202ENST00000392351 LRRN3E7EW58 273 aa22.68■■□□□ 1.22
HOMER3-202ENST00000392351 PIP5K1CO60331 668 aa22.68■■□□□ 1.22
HOMER3-202ENST00000392351 FKBP6O75344 327 aa22.68■■□□□ 1.22
HOMER3-202ENST00000392351 AKR7A3O95154 331 aa22.68■■□□□ 1.22
HOMER3-202ENST00000392351 ACTR3P61158 418 aa22.68■■□□□ 1.22
HOMER3-202ENST00000392351 LSM11P83369 360 aaKnown RBP eCLIP22.68■■□□□ 1.22
HOMER3-202ENST00000392351 PAQR6Q6TCH4 344 aa22.68■■□□□ 1.22
HOMER3-202ENST00000392351 GCNT2Q8N0V5 402 aa22.68■■□□□ 1.22
HOMER3-202ENST00000392351 OR6S1Q8NH40 331 aa22.68■■□□□ 1.22
HOMER3-202ENST00000392351 ABHD3Q8WU67 409 aa22.68■■□□□ 1.22
HOMER3-202ENST00000392351 MOGAT1Q96PD6 335 aa22.68■■□□□ 1.22
HOMER3-202ENST00000392351 C20orf141Q9NUB4 165 aa22.68■■□□□ 1.22
HOMER3-202ENST00000392351 ZNF814B7Z6K7 855 aa22.67■■□□□ 1.22
HOMER3-202ENST00000392351 BGLAPP02818 100 aa22.67■■□□□ 1.22
HOMER3-202ENST00000392351 CEACAM8P31997 349 aaPredicted RBP22.67■■□□□ 1.22
HOMER3-202ENST00000392351 H3F3AP84243 136 aa22.67■■□□□ 1.22
HOMER3-202ENST00000392351 ADORA2A-AS1P86434 159 aa22.67■■□□□ 1.22
HOMER3-202ENST00000392351 RIPPLY2Q5TAB7 128 aa22.67■■□□□ 1.22
HOMER3-202ENST00000392351 OR2T5Q6IEZ7 315 aa22.67■■□□□ 1.22
HOMER3-202ENST00000392351 PODNL1Q6PEZ8 512 aa22.67■■□□□ 1.22
HOMER3-202ENST00000392351 TBPL2Q6SJ96 375 aa22.67■■□□□ 1.22
HOMER3-202ENST00000392351 NAXEQ8NCW5 288 aa22.67■■□□□ 1.22
HOMER3-202ENST00000392351 OR2T29Q8NH02 315 aa22.67■■□□□ 1.22
HOMER3-202ENST00000392351 INTS12Q96CB8 462 aaKnown RBP22.67■■□□□ 1.22
HOMER3-202ENST00000392351 NAA11Q9BSU3 229 aaPredicted RBP22.67■■□□□ 1.22
HOMER3-202ENST00000392351 YY1AP1Q9H869 796 aa22.67■■□□□ 1.22
HOMER3-202ENST00000392351 C6orf203Q9P0P8 240 aaPredicted RBP22.67■■□□□ 1.22
HOMER3-202ENST00000392351 A0A0G2JNJ9 132 aa22.67■■□□□ 1.22
HOMER3-202ENST00000392351 ANKRD65E5RJM6 399 aa22.67■■□□□ 1.22
HOMER3-202ENST00000392351 RCBTB2O95199 551 aa22.67■■□□□ 1.22
HOMER3-202ENST00000392351 CH25HO95992 272 aa22.67■■□□□ 1.22
HOMER3-202ENST00000392351 CST1P01037 141 aa22.67■■□□□ 1.22
HOMER3-202ENST00000392351 GRPRP30550 384 aa22.67■■□□□ 1.22
HOMER3-202ENST00000392351 LTBQ06643 244 aa22.67■■□□□ 1.22
HOMER3-202ENST00000392351 ZNF74Q16587 644 aa22.67■■□□□ 1.22
HOMER3-202ENST00000392351 OTUD3Q5T2D3 398 aaPredicted RBP22.67■■□□□ 1.22
HOMER3-202ENST00000392351 OR2A2Q6IF42 318 aa22.67■■□□□ 1.22
HOMER3-202ENST00000392351 RRM2BQ7LG56 351 aa22.67■■□□□ 1.22
HOMER3-202ENST00000392351 CCDC103Q8IW40 242 aa22.67■■□□□ 1.22
HOMER3-202ENST00000392351 MCEMP1Q8IX19 187 aa22.67■■□□□ 1.22
HOMER3-202ENST00000392351 NRMQ8IXM6 262 aa22.67■■□□□ 1.22
HOMER3-202ENST00000392351 SLC43A2Q8N370 569 aa22.67■■□□□ 1.22
HOMER3-202ENST00000392351 TMEM99Q8N816 258 aa22.67■■□□□ 1.22
HOMER3-202ENST00000392351 PAPD5Q8NDF8 572 aaKnown RBP22.67■■□□□ 1.22
HOMER3-202ENST00000392351 SEC14L4Q9UDX3 406 aa22.67■■□□□ 1.22
HOMER3-202ENST00000392351 Q9UFV3 132 aa22.67■■□□□ 1.22
HOMER3-202ENST00000392351 FASNP49327 2511 aaKnown RBP22.67■■□□□ 1.22
HOMER3-202ENST00000392351 M0R082 166 aa22.66■■□□□ 1.22
HOMER3-202ENST00000392351 CYTIPO60759 359 aa22.66■■□□□ 1.22
HOMER3-202ENST00000392351 KRT36O76013 467 aa22.66■■□□□ 1.22
HOMER3-202ENST00000392351 PLGP00747 810 aaPredicted RBP22.66■■□□□ 1.22
HOMER3-202ENST00000392351 MT-ATP6P00846 226 aa22.66■■□□□ 1.22
HOMER3-202ENST00000392351 MFSD13AQ14CX5 517 aa22.66■■□□□ 1.22
HOMER3-202ENST00000392351 RNPS1Q15287 305 aaKnown RBP22.66■■□□□ 1.22
HOMER3-202ENST00000392351 ABLIM2Q6H8Q1 611 aa22.66■■□□□ 1.22
HOMER3-202ENST00000392351 MBOAT2Q6ZWT7 520 aa22.66■■□□□ 1.22
HOMER3-202ENST00000392351 RNF113BQ8IZP6 322 aaKnown RBP22.66■■□□□ 1.22
HOMER3-202ENST00000392351 ZNF417Q8TAU3 575 aa22.66■■□□□ 1.22
HOMER3-202ENST00000392351 ZFP3Q96NJ6 502 aa22.66■■□□□ 1.22
HOMER3-202ENST00000392351 ZNF587Q96SQ5 575 aaPredicted RBP22.66■■□□□ 1.22
HOMER3-202ENST00000392351 DENND2DQ9H6A0 471 aaPredicted RBP22.66■■□□□ 1.22
HOMER3-202ENST00000392351 CLEC4AQ9UMR7 237 aa22.66■■□□□ 1.22
HOMER3-202ENST00000392351 LYVE1Q9Y5Y7 322 aa22.66■■□□□ 1.22
HOMER3-202ENST00000392351 AQP7P3A6NL99 342 aa22.65■■□□□ 1.22
HOMER3-202ENST00000392351 RAMP1O60894 148 aa22.65■■□□□ 1.22
HOMER3-202ENST00000392351 FZD7O75084 574 aa22.65■■□□□ 1.22
HOMER3-202ENST00000392351 TMIGD3P0DMS9 266 aaPredicted RBP22.65■■□□□ 1.22
HOMER3-202ENST00000392351 IFI30P13284 250 aa22.65■■□□□ 1.22
HOMER3-202ENST00000392351 RASGEF1BQ0VAM2 473 aa22.65■■□□□ 1.22
HOMER3-202ENST00000392351 SEC23BQ15437 767 aa22.65■■□□□ 1.22
HOMER3-202ENST00000392351 GTF2IRD2BQ6EKJ0 949 aa22.65■■□□□ 1.22
HOMER3-202ENST00000392351 GTF2IRD2Q86UP8 949 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms