RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 CBX3Q13185 183 aa0.62□□□□□ -2.31
SNORD28B-201ENST00000390993 TAF9Q16594 264 aa0.62□□□□□ -2.31
SNORD28B-201ENST00000390993 MICBQ29980 383 aa0.62□□□□□ -2.31
SNORD28B-201ENST00000390993 MARCH8Q5T0T0 291 aa0.62□□□□□ -2.31
SNORD28B-201ENST00000390993 RAET1LQ5VY80 246 aa0.62□□□□□ -2.31
SNORD28B-201ENST00000390993 TMEM225Q6GV28 225 aa0.62□□□□□ -2.31
SNORD28B-201ENST00000390993 OR6B2Q6IFH4 312 aa0.62□□□□□ -2.31
SNORD28B-201ENST00000390993 WDR88Q6ZMY6 472 aa0.62□□□□□ -2.31
SNORD28B-201ENST00000390993 RFLNAQ6ZTI6 216 aa0.62□□□□□ -2.31
SNORD28B-201ENST00000390993 SNX32Q86XE0 403 aa0.62□□□□□ -2.31
SNORD28B-201ENST00000390993 ZDHHC21Q8IVQ6 265 aa0.62□□□□□ -2.31
SNORD28B-201ENST00000390993 RDH10Q8IZV5 341 aa0.62□□□□□ -2.31
SNORD28B-201ENST00000390993 GCNT2Q8N0V5 402 aa0.62□□□□□ -2.31
SNORD28B-201ENST00000390993 RNF148Q8N7C7 305 aa0.62□□□□□ -2.31
SNORD28B-201ENST00000390993 GATSQ8NAP1 163 aa0.62□□□□□ -2.31
SNORD28B-201ENST00000390993 OR51G2Q8NGK0 314 aa0.62□□□□□ -2.31
SNORD28B-201ENST00000390993 OR2G3Q8NGZ4 309 aa0.62□□□□□ -2.31
SNORD28B-201ENST00000390993 OR5W2Q8NH69 310 aa0.62□□□□□ -2.31
SNORD28B-201ENST00000390993 M1APQ8TC57 530 aa0.62□□□□□ -2.31
SNORD28B-201ENST00000390993 PHOSPHO2Q8TCD6 241 aa0.62□□□□□ -2.31
SNORD28B-201ENST00000390993 TM4SF19Q96DZ7 209 aa0.62□□□□□ -2.31
SNORD28B-201ENST00000390993 PAGE5Q96GU1 130 aa0.62□□□□□ -2.31
SNORD28B-201ENST00000390993 CCNL2Q96S94 520 aaPredicted RBP0.62□□□□□ -2.31
SNORD28B-201ENST00000390993 DOK1Q99704 481 aa0.62□□□□□ -2.31
SNORD28B-201ENST00000390993 NXF5Q9H1B4 397 aaKnown RBP0.62□□□□□ -2.31
SNORD28B-201ENST00000390993 LINC00597Q9H2U6 94 aa0.62□□□□□ -2.31
SNORD28B-201ENST00000390993 SUDS3Q9H7L9 328 aaPredicted RBP0.62□□□□□ -2.31
SNORD28B-201ENST00000390993 WDR76Q9H967 626 aa0.62□□□□□ -2.31
SNORD28B-201ENST00000390993 SYTL2Q9HCH5 934 aa0.62□□□□□ -2.31
SNORD28B-201ENST00000390993 HMG20AQ9NP66 347 aa0.62□□□□□ -2.31
SNORD28B-201ENST00000390993 CCL28Q9NRJ3 127 aa0.62□□□□□ -2.31
SNORD28B-201ENST00000390993 CWC25Q9NXE8 425 aaPredicted RBP0.62□□□□□ -2.31
SNORD28B-201ENST00000390993 SMPD3Q9NY59 655 aaPredicted RBP0.62□□□□□ -2.31
SNORD28B-201ENST00000390993 CYP39A1Q9NYL5 469 aa0.62□□□□□ -2.31
SNORD28B-201ENST00000390993 CHMP2BQ9UQN3 213 aa0.62□□□□□ -2.31
SNORD28B-201ENST00000390993 ABCC4O15439 1325 aa0.62□□□□□ -2.31
SNORD28B-201ENST00000390993 ADGRL1O94910 1474 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 CABIN1Q9Y6J0 2220 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 DHX29Q7Z478 1369 aaKnown RBP0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 IGHV5-51A0A0C4DH38 117 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 ZNF705GA8MUZ8 300 aaPredicted RBP0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 TRDCB7Z8K6 153 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 DDX39AO00148 427 aaKnown RBP0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 MBTPS2O43462 519 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 CHST1O43916 411 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 KERAO60938 352 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 SRP72O76094 671 aaKnown RBP0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 MPZL1O95297 269 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 TRIM16O95361 564 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 OPN1LWP04000 364 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 GLAP06280 429 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 CSF3P09919 207 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 ZCCHC18P0CG32 403 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 SMIM10L1P0DMW3 83 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 PGCP20142 388 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 CNR1P21554 472 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 AHCYP23526 432 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 AKT2P31751 481 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 CYLC1P35663 651 aaPredicted RBP0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 NAMPTP43490 491 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 CYB561P49447 251 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 SPIBQ01892 262 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 ERCC8Q13216 396 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 KIAA0087Q14695 138 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 TRIP10Q15642 601 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 SLC5A12Q1EHB4 618 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 TIGITQ495A1 244 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 CTRB2Q6GPI1 263 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 GALNT17Q6IS24 598 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 AFTPHQ6ULP2 937 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 FAM92BQ6ZTR7 304 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 PEX26Q7Z412 305 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 KRT77Q7Z794 578 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 ACOT1Q86TX2 421 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 SLC26A11Q86WA9 606 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 CBWD2Q8IUF1 395 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 CCDC50Q8IVM0 306 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 MISPQ8IVT2 679 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 CNTN4Q8IWV2 1026 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 CCDC65Q8IXS2 484 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 KDM8Q8N371 416 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 SFRP1Q8N474 314 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 KIR3DL3Q8N743 410 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 NKAIN3Q8N8D7 197 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 SYT14Q8NB59 555 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 IPMKQ8NFU5 416 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 OR56B1Q8NGI3 324 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 OR10G4Q8NGN3 311 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 OR9A2Q8NGT5 310 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 ACTRT1Q8TDG2 376 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 KRT35Q92764 455 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 DNAJC19Q96DA6 116 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 L3HYPDHQ96EM0 354 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 C14orf79Q96F83 325 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 TIMD4Q96H15 378 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 SMIM10Q96HG1 83 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 SPATA13Q96N96 652 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 OR2A5Q96R48 311 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 ZNF382Q96SR6 550 aa0.61□□□□□ -2.31
SNORD28B-201ENST00000390993 SLC6A7Q99884 636 aa0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms