RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 GPM6AP51674 278 aa5.33□□□□□ -1.56
RFC1-202ENST00000381897 ERVK-25P63136 954 aa5.33□□□□□ -1.56
RFC1-202ENST00000381897 ILKQ13418 452 aa5.33□□□□□ -1.56
RFC1-202ENST00000381897 IRF3Q14653 427 aa5.33□□□□□ -1.56
RFC1-202ENST00000381897 SOWAHCQ53LP3 525 aaPredicted RBP5.33□□□□□ -1.56
RFC1-202ENST00000381897 ANKRD34AQ69YU3 496 aa5.33□□□□□ -1.56
RFC1-202ENST00000381897 LRFN4Q6PJG9 635 aa5.33□□□□□ -1.56
RFC1-202ENST00000381897 GSG1LQ6UXU4 331 aa5.33□□□□□ -1.56
RFC1-202ENST00000381897 QSOX2Q6ZRP7 698 aa5.33□□□□□ -1.56
RFC1-202ENST00000381897 HIST3H2AQ7L7L0 130 aa5.33□□□□□ -1.56
RFC1-202ENST00000381897 WDR53Q7Z5U6 358 aaPredicted RBP5.33□□□□□ -1.56
RFC1-202ENST00000381897 RABEPKQ7Z6M1 372 aa5.33□□□□□ -1.56
RFC1-202ENST00000381897 CACUL1Q86Y37 369 aa5.33□□□□□ -1.56
RFC1-202ENST00000381897 SMAP2Q8WU79 429 aaPredicted RBP5.33□□□□□ -1.56
RFC1-202ENST00000381897 CYB5D2Q8WUJ1 264 aa5.33□□□□□ -1.56
RFC1-202ENST00000381897 APH1BQ8WW43 257 aa5.33□□□□□ -1.56
RFC1-202ENST00000381897 ASB13Q8WXK3 278 aa5.33□□□□□ -1.56
RFC1-202ENST00000381897 CLSTN3Q9BQT9 956 aa5.33□□□□□ -1.56
RFC1-202ENST00000381897 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.33□□□□□ -1.56
RFC1-202ENST00000381897 ASB6Q9NWX5 421 aa5.33□□□□□ -1.56
RFC1-202ENST00000381897 KCNK6Q9Y257 313 aa5.33□□□□□ -1.56
RFC1-202ENST00000381897 OR2AT4A6NND4 320 aa5.33□□□□□ -1.56
RFC1-202ENST00000381897 RNASET2O00584 256 aaKnown RBP5.33□□□□□ -1.56
RFC1-202ENST00000381897 IGSF6O95976 241 aa5.33□□□□□ -1.56
RFC1-202ENST00000381897 HRGP04196 525 aa5.33□□□□□ -1.56
RFC1-202ENST00000381897 DRD2P14416 443 aa5.33□□□□□ -1.56
RFC1-202ENST00000381897 HPGDP15428 266 aa5.33□□□□□ -1.56
RFC1-202ENST00000381897 RAB5AP20339 215 aa5.33□□□□□ -1.56
RFC1-202ENST00000381897 ITGB7P26010 798 aa5.33□□□□□ -1.56
RFC1-202ENST00000381897 ACTR1BP42025 376 aa5.33□□□□□ -1.56
RFC1-202ENST00000381897 OR1E2P47887 323 aa5.33□□□□□ -1.56
RFC1-202ENST00000381897 EVX1P49640 407 aa5.33□□□□□ -1.56
RFC1-202ENST00000381897 VGLL4Q14135 290 aa5.33□□□□□ -1.56
RFC1-202ENST00000381897 ADIPOQQ15848 244 aa5.33□□□□□ -1.56
RFC1-202ENST00000381897 HIKESHIQ53FT3 197 aa5.33□□□□□ -1.56
RFC1-202ENST00000381897 MS4A13Q5J8X5 152 aa5.33□□□□□ -1.56
RFC1-202ENST00000381897 NKAPLQ5M9Q1 402 aa5.33□□□□□ -1.56
RFC1-202ENST00000381897 EIF5AL1Q6IS14 154 aaKnown RBP5.33□□□□□ -1.56
RFC1-202ENST00000381897 CNKSR3Q6P9H4 555 aa5.33□□□□□ -1.56
RFC1-202ENST00000381897 ZCCHC12Q6PEW1 402 aa5.33□□□□□ -1.56
RFC1-202ENST00000381897 HAPLN4Q86UW8 402 aa5.33□□□□□ -1.56
RFC1-202ENST00000381897 KLHDC8BQ8IXV7 354 aa5.33□□□□□ -1.56
RFC1-202ENST00000381897 LINC00518Q8N0U6 118 aa5.33□□□□□ -1.56
RFC1-202ENST00000381897 SEMA6DQ8NFY4 1073 aa5.33□□□□□ -1.56
RFC1-202ENST00000381897 OR8J2Q8NGG1 315 aa5.33□□□□□ -1.56
RFC1-202ENST00000381897 OR56A1Q8NGH5 318 aa5.33□□□□□ -1.56
RFC1-202ENST00000381897 THAP4Q8WY91 577 aa5.33□□□□□ -1.56
RFC1-202ENST00000381897 PTP4A1Q93096 173 aa5.33□□□□□ -1.56
RFC1-202ENST00000381897 LRFN3Q9BTN0 628 aa5.33□□□□□ -1.56
RFC1-202ENST00000381897 MRI1Q9BV20 369 aa5.33□□□□□ -1.56
RFC1-202ENST00000381897 POLDIP3Q9BY77 421 aaKnown RBP5.33□□□□□ -1.56
RFC1-202ENST00000381897 FOXQ1Q9C009 403 aa5.33□□□□□ -1.56
RFC1-202ENST00000381897 NKX6-2Q9C056 277 aaPredicted RBP5.33□□□□□ -1.56
RFC1-202ENST00000381897 RHBGQ9H310 441 aa5.33□□□□□ -1.56
RFC1-202ENST00000381897 SMOC1Q9H4F8 434 aa5.33□□□□□ -1.56
RFC1-202ENST00000381897 SLC25A37Q9NYZ2 338 aa5.33□□□□□ -1.56
RFC1-202ENST00000381897 CALML5Q9NZT1 146 aa5.33□□□□□ -1.56
RFC1-202ENST00000381897 GREB1LQ9C091 1923 aaPredicted RBP5.33□□□□□ -1.56
RFC1-202ENST00000381897 A0A1W2PRB8 838 aa5.32□□□□□ -1.56
RFC1-202ENST00000381897 MYBPHLA2RUH7 354 aa5.32□□□□□ -1.56
RFC1-202ENST00000381897 ZAR1LA6NP61 321 aa5.32□□□□□ -1.56
RFC1-202ENST00000381897 D6RAR5 112 aa5.32□□□□□ -1.56
RFC1-202ENST00000381897 PRAMEF26H0Y7S4 382 aa5.32□□□□□ -1.56
RFC1-202ENST00000381897 OR7A17O14581 309 aa5.32□□□□□ -1.56
RFC1-202ENST00000381897 KNG1P01042 644 aa5.32□□□□□ -1.56
RFC1-202ENST00000381897 UGT2B7P16662 529 aa5.32□□□□□ -1.56
RFC1-202ENST00000381897 SDC1P18827 310 aa5.32□□□□□ -1.56
RFC1-202ENST00000381897 TACR2P21452 398 aa5.32□□□□□ -1.56
RFC1-202ENST00000381897 UQCRC2P22695 453 aa5.32□□□□□ -1.56
RFC1-202ENST00000381897 ITPKAP23677 461 aa5.32□□□□□ -1.56
RFC1-202ENST00000381897 AOAHP28039 575 aa5.32□□□□□ -1.56
RFC1-202ENST00000381897 S100A11P31949 105 aa5.32□□□□□ -1.56
RFC1-202ENST00000381897 ID1P41134 155 aa5.32□□□□□ -1.56
RFC1-202ENST00000381897 WASP42768 502 aa5.32□□□□□ -1.56
RFC1-202ENST00000381897 GUCA1AP43080 201 aaPredicted RBP5.32□□□□□ -1.56
RFC1-202ENST00000381897 ZNF140P52738 457 aaPredicted RBP5.32□□□□□ -1.56
RFC1-202ENST00000381897 DLX5P56178 289 aa5.32□□□□□ -1.56
RFC1-202ENST00000381897 TCTN1Q2MV58 587 aa5.32□□□□□ -1.56
RFC1-202ENST00000381897 GLYR1Q49A26 553 aaPredicted RBP5.32□□□□□ -1.56
RFC1-202ENST00000381897 TMEM196Q5HYL7 178 aa5.32□□□□□ -1.56
RFC1-202ENST00000381897 AVPI1Q5T686 147 aa5.32□□□□□ -1.56
RFC1-202ENST00000381897 CEACAM20Q6UY09 585 aa5.32□□□□□ -1.56
RFC1-202ENST00000381897 CHRDL2Q6WN34 429 aa5.32□□□□□ -1.56
RFC1-202ENST00000381897 Q6ZPB1 254 aaPredicted RBP5.32□□□□□ -1.56
RFC1-202ENST00000381897 TAS1R1Q7RTX1 841 aa5.32□□□□□ -1.56
RFC1-202ENST00000381897 S100A7AQ86SG5 101 aa5.32□□□□□ -1.56
RFC1-202ENST00000381897 TBC1D26Q86UD7 250 aa5.32□□□□□ -1.56
RFC1-202ENST00000381897 FAM181AQ8N9Y4 354 aa5.32□□□□□ -1.56
RFC1-202ENST00000381897 Q8NFD4 153 aa5.32□□□□□ -1.56
RFC1-202ENST00000381897 BEST4Q8NFU0 473 aa5.32□□□□□ -1.56
RFC1-202ENST00000381897 OR51E1Q8TCB6 317 aa5.32□□□□□ -1.56
RFC1-202ENST00000381897 PKMYT1Q99640 499 aa5.32□□□□□ -1.56
RFC1-202ENST00000381897 RHNO1Q9BSD3 238 aa5.32□□□□□ -1.56
RFC1-202ENST00000381897 SEMA6CQ9H3T2 930 aa5.32□□□□□ -1.56
RFC1-202ENST00000381897 REEP4Q9H6H4 257 aa5.32□□□□□ -1.56
RFC1-202ENST00000381897 METTL17Q9H7H0 456 aaPredicted RBP5.32□□□□□ -1.56
RFC1-202ENST00000381897 MKKSQ9NPJ1 570 aaPredicted RBP5.32□□□□□ -1.56
RFC1-202ENST00000381897 CYB5R1Q9UHQ9 305 aa5.32□□□□□ -1.56
RFC1-202ENST00000381897 UTS2RQ9UKP6 389 aa5.32□□□□□ -1.56
RFC1-202ENST00000381897 MEMO1Q9Y316 297 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms