RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 CLUP10909 449 aa21.07■□□□□ 0.96
VPS16-201ENST00000380443 ZNF117Q03924 483 aa21.07■□□□□ 0.96
VPS16-201ENST00000380443 EFR3AQ14156 821 aa21.07■□□□□ 0.96
VPS16-201ENST00000380443 PAMR1Q6UXH9 720 aa21.07■□□□□ 0.96
VPS16-201ENST00000380443 TMEM91Q6ZNR0 172 aa21.07■□□□□ 0.96
VPS16-201ENST00000380443 BPHLQ86WA6 291 aaPredicted RBP21.07■□□□□ 0.96
VPS16-201ENST00000380443 LAX1Q8IWV1 398 aa21.07■□□□□ 0.96
VPS16-201ENST00000380443 GDPD1Q8N9F7 314 aa21.07■□□□□ 0.96
VPS16-201ENST00000380443 STT3BQ8TCJ2 826 aa21.07■□□□□ 0.96
VPS16-201ENST00000380443 ITPKCQ96DU7 683 aa21.07■□□□□ 0.96
VPS16-201ENST00000380443 TBX5Q99593 518 aa21.07■□□□□ 0.96
VPS16-201ENST00000380443 SEMA4CQ9C0C4 833 aa21.07■□□□□ 0.96
VPS16-201ENST00000380443 FKRPQ9H9S5 495 aa21.07■□□□□ 0.96
VPS16-201ENST00000380443 ABCB9Q9NP78 766 aa21.07■□□□□ 0.96
VPS16-201ENST00000380443 MOKQ9UQ07 419 aa21.07■□□□□ 0.96
VPS16-201ENST00000380443 UNC13CQ8NB66 2214 aa21.07■□□□□ 0.96
VPS16-201ENST00000380443 HEATR5AQ86XA9 2040 aa21.07■□□□□ 0.96
VPS16-201ENST00000380443 CPED1A4D0V7 1026 aa21.06■□□□□ 0.96
VPS16-201ENST00000380443 OR6C70A6NIJ9 312 aa21.06■□□□□ 0.96
VPS16-201ENST00000380443 SERPINA3P01011 423 aa21.06■□□□□ 0.96
VPS16-201ENST00000380443 TACR3P29371 465 aa21.06■□□□□ 0.96
VPS16-201ENST00000380443 NRG3P56975 720 aa21.06■□□□□ 0.96
VPS16-201ENST00000380443 CBFBQ13951 182 aa21.06■□□□□ 0.96
VPS16-201ENST00000380443 TPRA1Q86W33 373 aa21.06■□□□□ 0.96
VPS16-201ENST00000380443 C10orf53Q8N6V4 93 aa21.06■□□□□ 0.96
VPS16-201ENST00000380443 TEX19Q8NA77 164 aa21.06■□□□□ 0.96
VPS16-201ENST00000380443 LRRC75AQ8NAA5 344 aa21.06■□□□□ 0.96
VPS16-201ENST00000380443 SYT14Q8NB59 555 aa21.06■□□□□ 0.96
VPS16-201ENST00000380443 ADAM30Q9UKF2 790 aa21.06■□□□□ 0.96
VPS16-201ENST00000380443 RARRES3Q9UL19 164 aa21.06■□□□□ 0.96
VPS16-201ENST00000380443 PPIEQ9UNP9 301 aaKnown RBP21.06■□□□□ 0.96
VPS16-201ENST00000380443 LY6G6EA0A0G2JKS1 128 aa21.06■□□□□ 0.96
VPS16-201ENST00000380443 HCRTR2O43614 444 aa21.06■□□□□ 0.96
VPS16-201ENST00000380443 PRKNO60260 465 aaPredicted RBP21.06■□□□□ 0.96
VPS16-201ENST00000380443 HIST1H2ABP04908 130 aa21.06■□□□□ 0.96
VPS16-201ENST00000380443 MRPL3P09001 348 aaKnown RBP21.06■□□□□ 0.96
VPS16-201ENST00000380443 ABCD3P28288 659 aa21.06■□□□□ 0.96
VPS16-201ENST00000380443 GLYR1Q49A26 553 aaPredicted RBP21.06■□□□□ 0.96
VPS16-201ENST00000380443 NKAIN1Q4KMZ8 207 aa21.06■□□□□ 0.96
VPS16-201ENST00000380443 GUSBP11Q6P575 273 aa21.06■□□□□ 0.96
VPS16-201ENST00000380443 HIST3H2AQ7L7L0 130 aa21.06■□□□□ 0.96
VPS16-201ENST00000380443 SLC35F2Q8IXU6 374 aa21.06■□□□□ 0.96
VPS16-201ENST00000380443 HIST1H2ACQ93077 130 aa21.06■□□□□ 0.96
VPS16-201ENST00000380443 C4orf36Q96KX1 117 aa21.06■□□□□ 0.96
VPS16-201ENST00000380443 SRRQ9GZT4 340 aa21.06■□□□□ 0.96
VPS16-201ENST00000380443 MIXL1Q9H2W2 232 aa21.06■□□□□ 0.96
VPS16-201ENST00000380443 LRRN3Q9H3W5 708 aa21.06■□□□□ 0.96
VPS16-201ENST00000380443 SLC22A11Q9NSA0 550 aa21.06■□□□□ 0.96
VPS16-201ENST00000380443 CTSFQ9UBX1 484 aa21.06■□□□□ 0.96
VPS16-201ENST00000380443 FBXL4Q9UKA2 621 aa21.06■□□□□ 0.96
VPS16-201ENST00000380443 U3KQA8 63 aa21.06■□□□□ 0.96
VPS16-201ENST00000380443 LRRN3E7EW58 273 aa21.05■□□□□ 0.96
VPS16-201ENST00000380443 J3QLW9 94 aa21.05■□□□□ 0.96
VPS16-201ENST00000380443 SIGLEC6O43699 453 aa21.05■□□□□ 0.96
VPS16-201ENST00000380443 GLCEO94923 617 aa21.05■□□□□ 0.96
VPS16-201ENST00000380443 ATXN8OSP0DMR3 200 aa21.05■□□□□ 0.96
VPS16-201ENST00000380443 GP1BBP13224 206 aa21.05■□□□□ 0.96
VPS16-201ENST00000380443 ZNF19P17023 458 aa21.05■□□□□ 0.96
VPS16-201ENST00000380443 SPI1P17947 270 aa21.05■□□□□ 0.96
VPS16-201ENST00000380443 CXCR1P25024 350 aa21.05■□□□□ 0.96
VPS16-201ENST00000380443 MST1P26927 711 aa21.05■□□□□ 0.96
VPS16-201ENST00000380443 UQCRC1P31930 480 aa21.05■□□□□ 0.96
VPS16-201ENST00000380443 GBX2P52951 348 aaPredicted RBP21.05■□□□□ 0.96
VPS16-201ENST00000380443 CCL7P80098 99 aa21.05■□□□□ 0.96
VPS16-201ENST00000380443 HLA-BQ31612 363 aa21.05■□□□□ 0.96
VPS16-201ENST00000380443 ALG10Q5BKT4 473 aa21.05■□□□□ 0.96
VPS16-201ENST00000380443 PEAR1Q5VY43 1037 aaPredicted RBP21.05■□□□□ 0.96
VPS16-201ENST00000380443 GPR139Q6DWJ6 353 aa21.05■□□□□ 0.96
VPS16-201ENST00000380443 DMKNQ6E0U4 476 aaPredicted RBP21.05■□□□□ 0.96
VPS16-201ENST00000380443 PRR22Q8IZ63 422 aa21.05■□□□□ 0.96
VPS16-201ENST00000380443 KCTD12Q96CX2 325 aaKnown RBP21.05■□□□□ 0.96
VPS16-201ENST00000380443 NEURL2Q9BR09 285 aa21.05■□□□□ 0.96
VPS16-201ENST00000380443 ZMIZ1Q9ULJ6 1067 aa21.05■□□□□ 0.96
VPS16-201ENST00000380443 ADAM18Q9Y3Q7 739 aa21.05■□□□□ 0.96
VPS16-201ENST00000380443 FABP12A6NFH5 140 aa21.04■□□□□ 0.96
VPS16-201ENST00000380443 OGG1O15527 345 aa21.04■□□□□ 0.96
VPS16-201ENST00000380443 FADS1O60427 444 aa21.04■□□□□ 0.96
VPS16-201ENST00000380443 MT-ATP6P00846 226 aa21.04■□□□□ 0.96
VPS16-201ENST00000380443 HEXBP07686 556 aa21.04■□□□□ 0.96
VPS16-201ENST00000380443 SDHAP31040 664 aa21.04■□□□□ 0.96
VPS16-201ENST00000380443 P2RX1P51575 399 aa21.04■□□□□ 0.96
VPS16-201ENST00000380443 ERVK-25P63136 954 aa21.04■□□□□ 0.96
VPS16-201ENST00000380443 DCDP81605 110 aaKnown RBP21.04■□□□□ 0.96
VPS16-201ENST00000380443 EGR4Q05215 589 aa21.04■□□□□ 0.96
VPS16-201ENST00000380443 CDONQ4KMG0 1287 aa21.04■□□□□ 0.96
VPS16-201ENST00000380443 CCDC58Q4VC31 144 aa21.04■□□□□ 0.96
VPS16-201ENST00000380443 C5orf46Q6UWT4 87 aa21.04■□□□□ 0.96
VPS16-201ENST00000380443 JAZF1Q86VZ6 243 aa21.04■□□□□ 0.96
VPS16-201ENST00000380443 PRSS58Q8IYP2 241 aa21.04■□□□□ 0.96
VPS16-201ENST00000380443 OR8H2Q8N162 312 aa21.04■□□□□ 0.96
VPS16-201ENST00000380443 ZBTB44Q8NCP5 570 aa21.04■□□□□ 0.96
VPS16-201ENST00000380443 HAVCR2Q8TDQ0 301 aa21.04■□□□□ 0.96
VPS16-201ENST00000380443 ZMYND19Q96E35 227 aaPredicted RBP21.04■□□□□ 0.96
VPS16-201ENST00000380443 DIRAS2Q96HU8 199 aa21.04■□□□□ 0.96
VPS16-201ENST00000380443 ATXN7L1Q9ULK2 861 aaPredicted RBP21.04■□□□□ 0.96
VPS16-201ENST00000380443 SIRT4Q9Y6E7 314 aaPredicted RBP21.04■□□□□ 0.96
VPS16-201ENST00000380443 ARID1BQ8NFD5 2236 aaPredicted RBP21.04■□□□□ 0.96
VPS16-201ENST00000380443 CACNA1EQ15878 2313 aa21.04■□□□□ 0.96
VPS16-201ENST00000380443 CD8B2A6NJW9 211 aa21.04■□□□□ 0.96
VPS16-201ENST00000380443 BLOC1S5-TXNDC5H3BN57 136 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms