RNA–Protein interactions for RNA: ENST00000379013.6

UPK1A-202, Transcript of uroplakin 1A, humanhuman

TSL 1 (best) BASIC

Gene UPK1A, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-202ENST00000379013 PODNL1Q6PEZ8 512 aa12.47□□□□□ -0.41
UPK1A-202ENST00000379013 HIST3H2AQ7L7L0 130 aa12.47□□□□□ -0.41
UPK1A-202ENST00000379013 NKAIN4Q8IVV8 208 aa12.47□□□□□ -0.41
UPK1A-202ENST00000379013 C10orf53Q8N6V4 93 aa12.47□□□□□ -0.41
UPK1A-202ENST00000379013 ICA1LQ8NDH6 482 aa12.47□□□□□ -0.41
UPK1A-202ENST00000379013 MFSD8Q8NHS3 518 aa12.47□□□□□ -0.41
UPK1A-202ENST00000379013 TMEM255BQ8WV15 326 aa12.47□□□□□ -0.41
UPK1A-202ENST00000379013 SMPDL3BQ92485 455 aa12.47□□□□□ -0.41
UPK1A-202ENST00000379013 HIST1H2ACQ93077 130 aa12.47□□□□□ -0.41
UPK1A-202ENST00000379013 CPNE4Q96A23 557 aaPredicted RBP12.47□□□□□ -0.41
UPK1A-202ENST00000379013 EME1Q96AY2 570 aa12.47□□□□□ -0.41
UPK1A-202ENST00000379013 OR5B2Q96R09 309 aa12.47□□□□□ -0.41
UPK1A-202ENST00000379013 PRSS27Q9BQR3 290 aa12.47□□□□□ -0.41
UPK1A-202ENST00000379013 FKRPQ9H9S5 495 aa12.47□□□□□ -0.41
UPK1A-202ENST00000379013 NANSQ9NR45 359 aa12.47□□□□□ -0.41
UPK1A-202ENST00000379013 ZNF835Q9Y2P0 537 aa12.47□□□□□ -0.41
UPK1A-202ENST00000379013 ZNF337Q9Y3M9 751 aa12.47□□□□□ -0.41
UPK1A-202ENST00000379013 A0A087WUU8 490 aa12.46□□□□□ -0.41
UPK1A-202ENST00000379013 TRGV8A0A0C4DH27 118 aa12.46□□□□□ -0.41
UPK1A-202ENST00000379013 FIGNL2A6NMB9 653 aa12.46□□□□□ -0.41
UPK1A-202ENST00000379013 SULT2B1O00204 365 aa12.46□□□□□ -0.41
UPK1A-202ENST00000379013 EIF1AYO14602 144 aaKnown RBP12.46□□□□□ -0.41
UPK1A-202ENST00000379013 ADAP00813 363 aa12.46□□□□□ -0.41
UPK1A-202ENST00000379013 HOXD4P09016 255 aaPredicted RBP12.46□□□□□ -0.41
UPK1A-202ENST00000379013 CELA3AP09093 270 aa12.46□□□□□ -0.41
UPK1A-202ENST00000379013 SAGP10523 405 aaPredicted RBP12.46□□□□□ -0.41
UPK1A-202ENST00000379013 FCGR2AP12318 317 aa12.46□□□□□ -0.41
UPK1A-202ENST00000379013 IFI30P13284 250 aa12.46□□□□□ -0.41
UPK1A-202ENST00000379013 GABRA1P14867 456 aa12.46□□□□□ -0.41
UPK1A-202ENST00000379013 CPN1P15169 458 aa12.46□□□□□ -0.41
UPK1A-202ENST00000379013 ZNF708P17019 499 aa12.46□□□□□ -0.41
UPK1A-202ENST00000379013 BMP7P18075 431 aa12.46□□□□□ -0.41
UPK1A-202ENST00000379013 CCNA2P20248 432 aa12.46□□□□□ -0.41
UPK1A-202ENST00000379013 SFTPDP35247 375 aa12.46□□□□□ -0.41
UPK1A-202ENST00000379013 CASP6P55212 293 aa12.46□□□□□ -0.41
UPK1A-202ENST00000379013 ADORA2A-AS1P86434 159 aa12.46□□□□□ -0.41
UPK1A-202ENST00000379013 PRKCDQ05655 676 aa12.46□□□□□ -0.41
UPK1A-202ENST00000379013 SLC34A1Q06495 639 aa12.46□□□□□ -0.41
UPK1A-202ENST00000379013 COX10Q12887 443 aa12.46□□□□□ -0.41
UPK1A-202ENST00000379013 SGCBQ16585 318 aa12.46□□□□□ -0.41
UPK1A-202ENST00000379013 TMEM176BQ3YBM2 270 aaPredicted RBP12.46□□□□□ -0.41
UPK1A-202ENST00000379013 NRMQ8IXM6 262 aa12.46□□□□□ -0.41
UPK1A-202ENST00000379013 SLC43A2Q8N370 569 aa12.46□□□□□ -0.41
UPK1A-202ENST00000379013 SCAIQ8N9R8 606 aa12.46□□□□□ -0.41
UPK1A-202ENST00000379013 ATP6V1C2Q8NEY4 427 aa12.46□□□□□ -0.41
UPK1A-202ENST00000379013 OR10G2Q8NGC3 310 aa12.46□□□□□ -0.41
UPK1A-202ENST00000379013 OR4C15Q8NGM1 316 aa12.46□□□□□ -0.41
UPK1A-202ENST00000379013 GNPDA2Q8TDQ7 276 aa12.46□□□□□ -0.41
UPK1A-202ENST00000379013 ITLN2Q8WWU7 325 aaPredicted RBP12.46□□□□□ -0.41
UPK1A-202ENST00000379013 BPIFA2Q96DR5 249 aa12.46□□□□□ -0.41
UPK1A-202ENST00000379013 SGTBQ96EQ0 304 aa12.46□□□□□ -0.41
UPK1A-202ENST00000379013 CCDC120Q96HB5 630 aa12.46□□□□□ -0.41
UPK1A-202ENST00000379013 PKP2Q99959 881 aa12.46□□□□□ -0.41
UPK1A-202ENST00000379013 RBM4BQ9BQ04 359 aaKnown RBP12.46□□□□□ -0.41
UPK1A-202ENST00000379013 NAA11Q9BSU3 229 aaPredicted RBP12.46□□□□□ -0.41
UPK1A-202ENST00000379013 RBM4Q9BWF3 364 aaKnown RBP12.46□□□□□ -0.41
UPK1A-202ENST00000379013 SEMA6AQ9H2E6 1030 aa12.46□□□□□ -0.41
UPK1A-202ENST00000379013 ALKBH4Q9NXW9 302 aa12.46□□□□□ -0.41
UPK1A-202ENST00000379013 PDP1Q9P0J1 537 aaPredicted RBP12.46□□□□□ -0.41
UPK1A-202ENST00000379013 SH3BGRL2Q9UJC5 107 aa12.46□□□□□ -0.41
UPK1A-202ENST00000379013 TINAGQ9UJW2 476 aa12.46□□□□□ -0.41
UPK1A-202ENST00000379013 ZNF229Q9UJW7 825 aa12.46□□□□□ -0.41
UPK1A-202ENST00000379013 MCTS1Q9ULC4 181 aaKnown RBP12.46□□□□□ -0.41
UPK1A-202ENST00000379013 SLC6A5Q9Y345 797 aa12.46□□□□□ -0.41
UPK1A-202ENST00000379013 TRBV4-1A0A0J9YWV2 114 aa12.45□□□□□ -0.42
UPK1A-202ENST00000379013 ENO4A6NNW6 628 aa12.45□□□□□ -0.42
UPK1A-202ENST00000379013 SHISA8B8ZZ34 492 aa12.45□□□□□ -0.42
UPK1A-202ENST00000379013 KPNA4O00629 521 aaPredicted RBP12.45□□□□□ -0.42
UPK1A-202ENST00000379013 SEC14L5O43304 696 aa12.45□□□□□ -0.42
UPK1A-202ENST00000379013 WDR1O75083 606 aa12.45□□□□□ -0.42
UPK1A-202ENST00000379013 NPIPB7O75200 414 aa12.45□□□□□ -0.42
UPK1A-202ENST00000379013 LYPD3O95274 346 aa12.45□□□□□ -0.42
UPK1A-202ENST00000379013 SYNGR4O95473 234 aa12.45□□□□□ -0.42
UPK1A-202ENST00000379013 THY1P04216 161 aa12.45□□□□□ -0.42
UPK1A-202ENST00000379013 PRF1P14222 555 aa12.45□□□□□ -0.42
UPK1A-202ENST00000379013 ABOP16442 354 aa12.45□□□□□ -0.42
UPK1A-202ENST00000379013 PTGS2P35354 604 aa12.45□□□□□ -0.42
UPK1A-202ENST00000379013 CA7P43166 264 aa12.45□□□□□ -0.42
UPK1A-202ENST00000379013 RPS5P46782 204 aaKnown RBP12.45□□□□□ -0.42
UPK1A-202ENST00000379013 LHX2P50458 406 aa12.45□□□□□ -0.42
UPK1A-202ENST00000379013 RAC3P60763 192 aa12.45□□□□□ -0.42
UPK1A-202ENST00000379013 MYBPHQ13203 477 aa12.45□□□□□ -0.42
UPK1A-202ENST00000379013 RFX4Q33E94 735 aa12.45□□□□□ -0.42
UPK1A-202ENST00000379013 HBMQ6B0K9 141 aa12.45□□□□□ -0.42
UPK1A-202ENST00000379013 GTF2IRD2BQ6EKJ0 949 aa12.45□□□□□ -0.42
UPK1A-202ENST00000379013 C1orf94Q6P1W5 598 aa12.45□□□□□ -0.42
UPK1A-202ENST00000379013 TMPPEQ6ZT21 453 aa12.45□□□□□ -0.42
UPK1A-202ENST00000379013 TMPRSS11FQ6ZWK6 438 aa12.45□□□□□ -0.42
UPK1A-202ENST00000379013 AMIGO2Q86SJ2 522 aa12.45□□□□□ -0.42
UPK1A-202ENST00000379013 GTF2IRD2Q86UP8 949 aa12.45□□□□□ -0.42
UPK1A-202ENST00000379013 TSPYL5Q86VY4 417 aaPredicted RBP12.45□□□□□ -0.42
UPK1A-202ENST00000379013 UBQLNLQ8IYU4 475 aa12.45□□□□□ -0.42
UPK1A-202ENST00000379013 ATG16L2Q8NAA4 619 aa12.45□□□□□ -0.42
UPK1A-202ENST00000379013 OR5M1Q8NGP8 315 aa12.45□□□□□ -0.42
UPK1A-202ENST00000379013 OR2V1Q8NHB1 315 aa12.45□□□□□ -0.42
UPK1A-202ENST00000379013 PRDM14Q9GZV8 571 aa12.45□□□□□ -0.42
UPK1A-202ENST00000379013 GABARAPL1Q9H0R8 117 aa12.45□□□□□ -0.42
UPK1A-202ENST00000379013 TMEM185BQ9H7F4 350 aa12.45□□□□□ -0.42
UPK1A-202ENST00000379013 OAZ3Q9UMX2 235 aa12.45□□□□□ -0.42
UPK1A-202ENST00000379013 OTOGQ6ZRI0 2925 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms