RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 USP22Q9UPT9 525 aa16.73■□□□□ 0.27
TMEM88B-201ENST00000378821 TRAPPC4Q9Y296 219 aa16.73■□□□□ 0.27
TMEM88B-201ENST00000378821 HDGFL3Q9Y3E1 203 aa16.73■□□□□ 0.27
TMEM88B-201ENST00000378821 SPIN1Q9Y657 262 aaPredicted RBP16.73■□□□□ 0.27
TMEM88B-201ENST00000378821 NSD1Q96L73 2696 aaPredicted RBP16.73■□□□□ 0.27
TMEM88B-201ENST00000378821 TMED7-TICAM2A0A0A6YYA0 188 aa16.72■□□□□ 0.27
TMEM88B-201ENST00000378821 ZNF716A6NP11 495 aa16.72■□□□□ 0.27
TMEM88B-201ENST00000378821 FESP07332 822 aa16.72■□□□□ 0.27
TMEM88B-201ENST00000378821 CCNA2P20248 432 aa16.72■□□□□ 0.27
TMEM88B-201ENST00000378821 IL32P24001 234 aa16.72■□□□□ 0.27
TMEM88B-201ENST00000378821 EDNRAP25101 427 aa16.72■□□□□ 0.27
TMEM88B-201ENST00000378821 TACR3P29371 465 aa16.72■□□□□ 0.27
TMEM88B-201ENST00000378821 SLC1A3P43003 542 aa16.72■□□□□ 0.27
TMEM88B-201ENST00000378821 HTR3AP46098 478 aa16.72■□□□□ 0.27
TMEM88B-201ENST00000378821 POLR2HP52434 150 aaKnown RBP16.72■□□□□ 0.27
TMEM88B-201ENST00000378821 SLC16A1P53985 500 aa16.72■□□□□ 0.27
TMEM88B-201ENST00000378821 H3F3AP84243 136 aa16.72■□□□□ 0.27
TMEM88B-201ENST00000378821 HOXC5Q00444 222 aa16.72■□□□□ 0.27
TMEM88B-201ENST00000378821 DMTNQ08495 405 aa16.72■□□□□ 0.27
TMEM88B-201ENST00000378821 VMACQ2NL98 169 aa16.72■□□□□ 0.27
TMEM88B-201ENST00000378821 BHLHA15Q7RTS1 189 aaPredicted RBP16.72■□□□□ 0.27
TMEM88B-201ENST00000378821 SSX8Q7RTT4 187 aa16.72■□□□□ 0.27
TMEM88B-201ENST00000378821 YTHDF3Q7Z739 585 aaKnown RBP16.72■□□□□ 0.27
TMEM88B-201ENST00000378821 PIGWQ7Z7B1 504 aa16.72■□□□□ 0.27
TMEM88B-201ENST00000378821 GALNT5Q7Z7M9 940 aa16.72■□□□□ 0.27
TMEM88B-201ENST00000378821 CADM2Q8N3J6 435 aa16.72■□□□□ 0.27
TMEM88B-201ENST00000378821 ARL5BQ96KC2 179 aa16.72■□□□□ 0.27
TMEM88B-201ENST00000378821 SH3GL1Q99961 368 aa16.72■□□□□ 0.27
TMEM88B-201ENST00000378821 BDH2Q9BUT1 245 aa16.72■□□□□ 0.27
TMEM88B-201ENST00000378821 POTEKPQ9BYX7 375 aa16.72■□□□□ 0.27
TMEM88B-201ENST00000378821 OR11A1Q9GZK7 315 aa16.72■□□□□ 0.27
TMEM88B-201ENST00000378821 NGBQ9NPG2 151 aa16.72■□□□□ 0.27
TMEM88B-201ENST00000378821 PRSS50Q9UI38 385 aa16.72■□□□□ 0.27
TMEM88B-201ENST00000378821 TMED7Q9Y3B3 224 aa16.72■□□□□ 0.27
TMEM88B-201ENST00000378821 TMEM72A0PK05 275 aa16.71■□□□□ 0.27
TMEM88B-201ENST00000378821 FAM171A2A8MVW0 826 aa16.71■□□□□ 0.27
TMEM88B-201ENST00000378821 OVOL3O00110 214 aa16.71■□□□□ 0.27
TMEM88B-201ENST00000378821 AIM2O14862 343 aa16.71■□□□□ 0.27
TMEM88B-201ENST00000378821 MFN2O95140 757 aa16.71■□□□□ 0.27
TMEM88B-201ENST00000378821 OPN1SWP03999 348 aa16.71■□□□□ 0.27
TMEM88B-201ENST00000378821 MAP2K6P52564 334 aa16.71■□□□□ 0.27
TMEM88B-201ENST00000378821 WBP2NLQ6ICG8 309 aa16.71■□□□□ 0.27
TMEM88B-201ENST00000378821 P2RY8Q86VZ1 359 aa16.71■□□□□ 0.27
TMEM88B-201ENST00000378821 ARMC8Q8IUR7 673 aa16.71■□□□□ 0.27
TMEM88B-201ENST00000378821 SLC30A8Q8IWU4 369 aa16.71■□□□□ 0.27
TMEM88B-201ENST00000378821 CIARTQ8N365 385 aaPredicted RBP16.71■□□□□ 0.27
TMEM88B-201ENST00000378821 AKAP1Q92667 903 aaKnown RBP eCLIP16.71■□□□□ 0.27
TMEM88B-201ENST00000378821 SLC35B4Q969S0 331 aa16.71■□□□□ 0.27
TMEM88B-201ENST00000378821 DNAJA3Q96EY1 480 aa16.71■□□□□ 0.27
TMEM88B-201ENST00000378821 PERPQ96FX8 193 aa16.71■□□□□ 0.27
TMEM88B-201ENST00000378821 Q96MF0 132 aa16.71■□□□□ 0.27
TMEM88B-201ENST00000378821 ECSITQ9BQ95 431 aa16.71■□□□□ 0.27
TMEM88B-201ENST00000378821 ADAM19Q9H013 955 aa16.71■□□□□ 0.27
TMEM88B-201ENST00000378821 ESRP2Q9H6T0 727 aaKnown RBP16.71■□□□□ 0.27
TMEM88B-201ENST00000378821 RNF115Q9Y4L5 304 aa16.71■□□□□ 0.27
TMEM88B-201ENST00000378821 PRORSD1PA6NEY8 169 aa16.7■□□□□ 0.26
TMEM88B-201ENST00000378821 ZNF208O43345 1280 aa16.7■□□□□ 0.26
TMEM88B-201ENST00000378821 SERPINB7O75635 380 aa16.7■□□□□ 0.26
TMEM88B-201ENST00000378821 HEXAP06865 529 aa16.7■□□□□ 0.26
TMEM88B-201ENST00000378821 TFPIP10646 304 aa16.7■□□□□ 0.26
TMEM88B-201ENST00000378821 IGHV1-2P23083 117 aa16.7■□□□□ 0.26
TMEM88B-201ENST00000378821 NTF4P34130 210 aa16.7■□□□□ 0.26
TMEM88B-201ENST00000378821 COPZ1P61923 177 aa16.7■□□□□ 0.26
TMEM88B-201ENST00000378821 LTBQ06643 244 aa16.7■□□□□ 0.26
TMEM88B-201ENST00000378821 SMYD1Q8NB12 490 aa16.7■□□□□ 0.26
TMEM88B-201ENST00000378821 TMEM171Q8WVE6 324 aa16.7■□□□□ 0.26
TMEM88B-201ENST00000378821 ZNF583Q96ND8 569 aa16.7■□□□□ 0.26
TMEM88B-201ENST00000378821 WFDC6Q9BQY6 131 aa16.7■□□□□ 0.26
TMEM88B-201ENST00000378821 CXorf56Q9H5V9 222 aa16.7■□□□□ 0.26
TMEM88B-201ENST00000378821 EMC3Q9P0I2 261 aa16.7■□□□□ 0.26
TMEM88B-201ENST00000378821 ARL2BPQ9Y2Y0 163 aa16.7■□□□□ 0.26
TMEM88B-201ENST00000378821 ZANQ9Y493 2812 aa16.69■□□□□ 0.26
TMEM88B-201ENST00000378821 ZC3H12DA2A288 527 aaKnown RBP16.69■□□□□ 0.26
TMEM88B-201ENST00000378821 DPRXA6NFQ7 191 aa16.69■□□□□ 0.26
TMEM88B-201ENST00000378821 CCT8L1PA6NM43 557 aa16.69■□□□□ 0.26
TMEM88B-201ENST00000378821 FAM220BPB1ANY3 271 aa16.69■□□□□ 0.26
TMEM88B-201ENST00000378821 M0QX08 132 aa16.69■□□□□ 0.26
TMEM88B-201ENST00000378821 CD3EP07766 207 aa16.69■□□□□ 0.26
TMEM88B-201ENST00000378821 DANCRP0C864 163 aa16.69■□□□□ 0.26
TMEM88B-201ENST00000378821 HTR2AP28223 471 aa16.69■□□□□ 0.26
TMEM88B-201ENST00000378821 NUDT2P50583 147 aa16.69■□□□□ 0.26
TMEM88B-201ENST00000378821 CRYBA2P53672 197 aa16.69■□□□□ 0.26
TMEM88B-201ENST00000378821 TIMM23BQ5SRD1 257 aa16.69■□□□□ 0.26
TMEM88B-201ENST00000378821 FBXW9Q5XUX1 488 aa16.69■□□□□ 0.26
TMEM88B-201ENST00000378821 C8orf82Q6P1X6 216 aaPredicted RBP16.69■□□□□ 0.26
TMEM88B-201ENST00000378821 CLEC9AQ6UXN8 241 aa16.69■□□□□ 0.26
TMEM88B-201ENST00000378821 PATL1Q86TB9 770 aaKnown RBP16.69■□□□□ 0.26
TMEM88B-201ENST00000378821 ZNF433Q8N7K0 673 aaPredicted RBP16.69■□□□□ 0.26
TMEM88B-201ENST00000378821 BHLHE22Q8NFJ8 381 aaPredicted RBP16.69■□□□□ 0.26
TMEM88B-201ENST00000378821 GPR32P1Q8NGA4 272 aa16.69■□□□□ 0.26
TMEM88B-201ENST00000378821 PIGXQ8TBF5 258 aa16.69■□□□□ 0.26
TMEM88B-201ENST00000378821 C3orf49Q96BT1 292 aa16.69■□□□□ 0.26
TMEM88B-201ENST00000378821 ZNF775Q96BV0 537 aaPredicted RBP16.69■□□□□ 0.26
TMEM88B-201ENST00000378821 TAMM41Q96BW9 452 aa16.69■□□□□ 0.26
TMEM88B-201ENST00000378821 ZHX1-C8orf76Q96EF9 292 aa16.69■□□□□ 0.26
TMEM88B-201ENST00000378821 CMTM6Q9NX76 183 aa16.69■□□□□ 0.26
TMEM88B-201ENST00000378821 TMEM181Q9P2C4 612 aa16.69■□□□□ 0.26
TMEM88B-201ENST00000378821 GMPR2Q9P2T1 348 aaKnown RBP16.69■□□□□ 0.26
TMEM88B-201ENST00000378821 H7C1Q1 480 aa16.68■□□□□ 0.26
TMEM88B-201ENST00000378821 GPR171O14626 319 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms