RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 FAM69AQ5T7M9 428 aa12.76□□□□□ -0.37
COL4A1-201ENST00000375820 ZNF691Q5VV52 312 aa12.76□□□□□ -0.37
COL4A1-201ENST00000375820 CLEC14AQ86T13 490 aa12.76□□□□□ -0.37
COL4A1-201ENST00000375820 OR7G1Q8NGA0 311 aa12.76□□□□□ -0.37
COL4A1-201ENST00000375820 METTL9Q9H1A3 318 aa12.76□□□□□ -0.37
COL4A1-201ENST00000375820 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.76□□□□□ -0.37
COL4A1-201ENST00000375820 DECR2Q9NUI1 292 aa12.76□□□□□ -0.37
COL4A1-201ENST00000375820 A6NHS1 94 aa12.76□□□□□ -0.37
COL4A1-201ENST00000375820 TACR3P29371 465 aa12.76□□□□□ -0.37
COL4A1-201ENST00000375820 UBE2KP61086 200 aa12.76□□□□□ -0.37
COL4A1-201ENST00000375820 WDR5P61964 334 aaKnown RBP12.76□□□□□ -0.37
COL4A1-201ENST00000375820 TGFBR3Q03167 851 aa12.76□□□□□ -0.37
COL4A1-201ENST00000375820 TATDN3Q17R31 274 aa12.76□□□□□ -0.37
COL4A1-201ENST00000375820 TMEM59Q9BXS4 323 aa12.76□□□□□ -0.37
COL4A1-201ENST00000375820 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.76□□□□□ -0.37
COL4A1-201ENST00000375820 M0QYG6 137 aa12.76□□□□□ -0.37
COL4A1-201ENST00000375820 M0QZQ0 153 aa12.76□□□□□ -0.37
COL4A1-201ENST00000375820 MSTNO14793 375 aa12.76□□□□□ -0.37
COL4A1-201ENST00000375820 OR2T1O43869 369 aa12.76□□□□□ -0.37
COL4A1-201ENST00000375820 ZFAND5O76080 213 aa12.76□□□□□ -0.37
COL4A1-201ENST00000375820 CLDN1O95832 211 aa12.76□□□□□ -0.37
COL4A1-201ENST00000375820 GRPP07492 148 aa12.76□□□□□ -0.37
COL4A1-201ENST00000375820 MEF2DQ14814 521 aa12.76□□□□□ -0.37
COL4A1-201ENST00000375820 KCNJ8Q15842 424 aa12.76□□□□□ -0.37
COL4A1-201ENST00000375820 ZNF684Q5T5D7 378 aa12.76□□□□□ -0.37
COL4A1-201ENST00000375820 IL34Q6ZMJ4 242 aa12.76□□□□□ -0.37
COL4A1-201ENST00000375820 ZNF767PQ75MW2 155 aa12.76□□□□□ -0.37
COL4A1-201ENST00000375820 TWSG1Q9GZX9 223 aa12.76□□□□□ -0.37
COL4A1-201ENST00000375820 SLC25A31Q9H0C2 315 aa12.76□□□□□ -0.37
COL4A1-201ENST00000375820 ZNF286AQ9HBT8 521 aa12.76□□□□□ -0.37
COL4A1-201ENST00000375820 ASB4Q9Y574 426 aa12.76□□□□□ -0.37
COL4A1-201ENST00000375820 KLHL33A6NCF5 533 aa12.75□□□□□ -0.37
COL4A1-201ENST00000375820 CACNG3O60359 315 aa12.75□□□□□ -0.37
COL4A1-201ENST00000375820 EDN1P05305 212 aa12.75□□□□□ -0.37
COL4A1-201ENST00000375820 CYBAP13498 195 aa12.75□□□□□ -0.37
COL4A1-201ENST00000375820 AGFG1P52594 562 aaKnown RBP12.75□□□□□ -0.37
COL4A1-201ENST00000375820 RPE65Q16518 533 aa12.75□□□□□ -0.37
COL4A1-201ENST00000375820 SERPINA11Q86U17 422 aa12.75□□□□□ -0.37
COL4A1-201ENST00000375820 LAX1Q8IWV1 398 aa12.75□□□□□ -0.37
COL4A1-201ENST00000375820 ZFAND1Q8TCF1 268 aa12.75□□□□□ -0.37
COL4A1-201ENST00000375820 LKAAEAR1Q8TD35 194 aa12.75□□□□□ -0.37
COL4A1-201ENST00000375820 PIGTQ969N2 578 aa12.75□□□□□ -0.37
COL4A1-201ENST00000375820 TNFRSF13CQ96RJ3 184 aa12.75□□□□□ -0.37
COL4A1-201ENST00000375820 PATZ1Q9HBE1 687 aaKnown RBP12.75□□□□□ -0.37
COL4A1-201ENST00000375820 ZFP57Q9NU63 452 aa12.75□□□□□ -0.37
COL4A1-201ENST00000375820 CNOT11Q9UKZ1 510 aaKnown RBP12.75□□□□□ -0.37
COL4A1-201ENST00000375820 NME7Q9Y5B8 376 aa12.75□□□□□ -0.37
COL4A1-201ENST00000375820 ZNF816-ZNF321PA0A0X1KG74 233 aa12.75□□□□□ -0.37
COL4A1-201ENST00000375820 BHLHE40O14503 412 aa12.75□□□□□ -0.37
COL4A1-201ENST00000375820 PRAMEF4O60810 478 aa12.75□□□□□ -0.37
COL4A1-201ENST00000375820 NSA2O95478 260 aaKnown RBP12.75□□□□□ -0.37
COL4A1-201ENST00000375820 TK1P04183 234 aa12.75□□□□□ -0.37
COL4A1-201ENST00000375820 CD38P28907 300 aa12.75□□□□□ -0.37
COL4A1-201ENST00000375820 HNRNPFP52597 415 aaKnown RBP12.75□□□□□ -0.37
COL4A1-201ENST00000375820 MLF1P58340 268 aa12.75□□□□□ -0.37
COL4A1-201ENST00000375820 ZNF321PQ8N8H1 164 aa12.75□□□□□ -0.37
COL4A1-201ENST00000375820 OR4A16Q8NH70 328 aa12.75□□□□□ -0.37
COL4A1-201ENST00000375820 ZNF566Q969W8 418 aa12.75□□□□□ -0.37
COL4A1-201ENST00000375820 CPNE4Q96A23 557 aaPredicted RBP12.75□□□□□ -0.37
COL4A1-201ENST00000375820 UBQLN4Q9NRR5 601 aa12.75□□□□□ -0.37
COL4A1-201ENST00000375820 EMC9Q9Y3B6 208 aa12.75□□□□□ -0.37
COL4A1-201ENST00000375820 SLC43A1O75387 559 aa12.75□□□□□ -0.37
COL4A1-201ENST00000375820 ALDOCP09972 364 aaKnown RBP12.75□□□□□ -0.37
COL4A1-201ENST00000375820 HNF1AP20823 631 aa12.75□□□□□ -0.37
COL4A1-201ENST00000375820 TAS2R19P59542 299 aa12.75□□□□□ -0.37
COL4A1-201ENST00000375820 KDM8Q8N371 416 aa12.75□□□□□ -0.37
COL4A1-201ENST00000375820 ACOT11Q8WXI4 607 aaPredicted RBP12.75□□□□□ -0.37
COL4A1-201ENST00000375820 NMNAT3Q96T66 252 aa12.75□□□□□ -0.37
COL4A1-201ENST00000375820 BABAM2Q9NXR7 383 aa12.75□□□□□ -0.37
COL4A1-201ENST00000375820 PCDHGA5Q9Y5G8 931 aa12.75□□□□□ -0.37
COL4A1-201ENST00000375820 ENTPD2Q9Y5L3 495 aa12.75□□□□□ -0.37
COL4A1-201ENST00000375820 MYOM1P52179 1685 aa12.75□□□□□ -0.37
COL4A1-201ENST00000375820 TGM1P22735 817 aa12.75□□□□□ -0.37
COL4A1-201ENST00000375820 GNB1P62873 340 aa12.75□□□□□ -0.37
COL4A1-201ENST00000375820 TCEAL1Q15170 157 aa12.75□□□□□ -0.37
COL4A1-201ENST00000375820 DUSP7Q16829 419 aa12.75□□□□□ -0.37
COL4A1-201ENST00000375820 ZNF468Q5VIY5 522 aaPredicted RBP12.75□□□□□ -0.37
COL4A1-201ENST00000375820 NPSR1Q6W5P4 371 aa12.75□□□□□ -0.37
COL4A1-201ENST00000375820 DRAXINQ8NBI3 349 aaPredicted RBP12.75□□□□□ -0.37
COL4A1-201ENST00000375820 AGPAT4Q9NRZ5 378 aa12.75□□□□□ -0.37
COL4A1-201ENST00000375820 MYH15Q9Y2K3 1946 aa12.75□□□□□ -0.37
COL4A1-201ENST00000375820 CD46P15529 392 aa12.75□□□□□ -0.37
COL4A1-201ENST00000375820 P2RX1P51575 399 aa12.75□□□□□ -0.37
COL4A1-201ENST00000375820 F2RL1P55085 397 aa12.75□□□□□ -0.37
COL4A1-201ENST00000375820 BIDP55957 195 aa12.75□□□□□ -0.37
COL4A1-201ENST00000375820 PDE7AQ13946 482 aa12.75□□□□□ -0.37
COL4A1-201ENST00000375820 IDO2Q6ZQW0 420 aa12.75□□□□□ -0.37
COL4A1-201ENST00000375820 ELP4Q96EB1 424 aa12.75□□□□□ -0.37
COL4A1-201ENST00000375820 EMCNQ9ULC0 261 aa12.75□□□□□ -0.37
COL4A1-201ENST00000375820 CCL26Q9Y258 94 aa12.75□□□□□ -0.37
COL4A1-201ENST00000375820 GPR45Q9Y5Y3 372 aa12.75□□□□□ -0.37
COL4A1-201ENST00000375820 IGHV3-20A0A0C4DH32 117 aa12.74□□□□□ -0.37
COL4A1-201ENST00000375820 METTL15A6NJ78 407 aa12.74□□□□□ -0.37
COL4A1-201ENST00000375820 KCNJ10P78508 379 aa12.74□□□□□ -0.37
COL4A1-201ENST00000375820 OR5AS1Q8N127 324 aa12.74□□□□□ -0.37
COL4A1-201ENST00000375820 OR4N2Q8NGD1 307 aa12.74□□□□□ -0.37
COL4A1-201ENST00000375820 WDR83Q9BRX9 315 aaKnown RBP12.74□□□□□ -0.37
COL4A1-201ENST00000375820 ZNF436Q9C0F3 470 aaPredicted RBP12.74□□□□□ -0.37
COL4A1-201ENST00000375820 RAB9BQ9NP90 201 aa12.74□□□□□ -0.37
COL4A1-201ENST00000375820 OSGIN2Q9Y236 505 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms