RNA–Protein interactions for RNA: ENST00000373711.3

CDKN1A-202, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDKN1A, Length 793 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-202ENST00000373711 TSSK3Q96PN8 268 aa12.95□□□□□ -0.34
CDKN1A-202ENST00000373711 JMJD8Q96S16 334 aa12.95□□□□□ -0.34
CDKN1A-202ENST00000373711 CCDC106Q9BWC9 280 aa12.95□□□□□ -0.34
CDKN1A-202ENST00000373711 RBM4Q9BWF3 364 aaKnown RBP12.95□□□□□ -0.34
CDKN1A-202ENST00000373711 METTL17Q9H7H0 456 aaPredicted RBP12.95□□□□□ -0.34
CDKN1A-202ENST00000373711 OBP2BQ9NPH6 170 aa12.95□□□□□ -0.34
CDKN1A-202ENST00000373711 CA10Q9NS85 328 aa12.95□□□□□ -0.34
CDKN1A-202ENST00000373711 ARMCX1Q9P291 453 aa12.95□□□□□ -0.34
CDKN1A-202ENST00000373711 TRIM33Q9UPN9 1127 aa12.95□□□□□ -0.34
CDKN1A-202ENST00000373711 MOKQ9UQ07 419 aa12.95□□□□□ -0.34
CDKN1A-202ENST00000373711 SLC9A8Q9Y2E8 581 aa12.95□□□□□ -0.34
CDKN1A-202ENST00000373711 TMEM89A2RUT3 159 aa12.94□□□□□ -0.34
CDKN1A-202ENST00000373711 ZNF716A6NP11 495 aa12.94□□□□□ -0.34
CDKN1A-202ENST00000373711 OIP5O43482 229 aa12.94□□□□□ -0.34
CDKN1A-202ENST00000373711 CCDC22O60826 627 aa12.94□□□□□ -0.34
CDKN1A-202ENST00000373711 PMS2P2O95744 297 aa12.94□□□□□ -0.34
CDKN1A-202ENST00000373711 CRYAAP02489 173 aa12.94□□□□□ -0.34
CDKN1A-202ENST00000373711 HMGN2P05204 90 aaKnown RBP12.94□□□□□ -0.34
CDKN1A-202ENST00000373711 TFPIP10646 304 aa12.94□□□□□ -0.34
CDKN1A-202ENST00000373711 PGCP20142 388 aa12.94□□□□□ -0.34
CDKN1A-202ENST00000373711 MAPK1P28482 360 aa12.94□□□□□ -0.34
CDKN1A-202ENST00000373711 IL12AP29459 219 aa12.94□□□□□ -0.34
CDKN1A-202ENST00000373711 MRPL19P49406 292 aaKnown RBP12.94□□□□□ -0.34
CDKN1A-202ENST00000373711 ATP4BP51164 291 aa12.94□□□□□ -0.34
CDKN1A-202ENST00000373711 MERTKQ12866 999 aa12.94□□□□□ -0.34
CDKN1A-202ENST00000373711 KLF10Q13118 480 aa12.94□□□□□ -0.34
CDKN1A-202ENST00000373711 PTGR1Q14914 329 aa12.94□□□□□ -0.34
CDKN1A-202ENST00000373711 EFNB3Q15768 340 aa12.94□□□□□ -0.34
CDKN1A-202ENST00000373711 ZSWIM7Q19AV6 140 aa12.94□□□□□ -0.34
CDKN1A-202ENST00000373711 PDCD4Q53EL6 469 aaKnown RBP12.94□□□□□ -0.34
CDKN1A-202ENST00000373711 EXOSC6Q5RKV6 272 aaKnown RBP12.94□□□□□ -0.34
CDKN1A-202ENST00000373711 ANKRD26P1Q6NSI1 321 aa12.94□□□□□ -0.34
CDKN1A-202ENST00000373711 R3HCC1LQ7Z5L2 792 aaKnown RBP12.94□□□□□ -0.34
CDKN1A-202ENST00000373711 ABHD12BQ7Z5M8 362 aaPredicted RBP12.94□□□□□ -0.34
CDKN1A-202ENST00000373711 FITM2Q8N6M3 262 aa12.94□□□□□ -0.34
CDKN1A-202ENST00000373711 WDR31Q8NA23 367 aa12.94□□□□□ -0.34
CDKN1A-202ENST00000373711 FAM216AQ8WUB2 273 aa12.94□□□□□ -0.34
CDKN1A-202ENST00000373711 SOX7Q9BT81 388 aa12.94□□□□□ -0.34
CDKN1A-202ENST00000373711 ACTRT3Q9BYD9 372 aa12.94□□□□□ -0.34
CDKN1A-202ENST00000373711 MOV10Q9HCE1 1003 aaKnown RBP12.94□□□□□ -0.34
CDKN1A-202ENST00000373711 SDR39U1Q9NRG7 319 aaPredicted RBP12.94□□□□□ -0.34
CDKN1A-202ENST00000373711 FAF1Q9UNN5 650 aaPredicted RBP12.94□□□□□ -0.34
CDKN1A-202ENST00000373711 HDGFL3Q9Y3E1 203 aa12.94□□□□□ -0.34
CDKN1A-202ENST00000373711 B4DSR2 109 aa12.93□□□□□ -0.34
CDKN1A-202ENST00000373711 DCTN3O75935 186 aa12.93□□□□□ -0.34
CDKN1A-202ENST00000373711 IDO1P14902 403 aa12.93□□□□□ -0.34
CDKN1A-202ENST00000373711 DAOP14920 347 aa12.93□□□□□ -0.34
CDKN1A-202ENST00000373711 MPGP29372 298 aa12.93□□□□□ -0.34
CDKN1A-202ENST00000373711 SLC1A3P43003 542 aa12.93□□□□□ -0.34
CDKN1A-202ENST00000373711 LIMS1P48059 325 aa12.93□□□□□ -0.34
CDKN1A-202ENST00000373711 CLDN8P56748 225 aa12.93□□□□□ -0.34
CDKN1A-202ENST00000373711 NDUFAF6Q330K2 333 aa12.93□□□□□ -0.34
CDKN1A-202ENST00000373711 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.93□□□□□ -0.34
CDKN1A-202ENST00000373711 C6orf89Q6UWU4 347 aa12.93□□□□□ -0.34
CDKN1A-202ENST00000373711 TREML1Q86YW5 311 aa12.93□□□□□ -0.34
CDKN1A-202ENST00000373711 FUNDC1Q8IVP5 155 aa12.93□□□□□ -0.34
CDKN1A-202ENST00000373711 MIER2Q8N344 545 aa12.93□□□□□ -0.34
CDKN1A-202ENST00000373711 KRTCAP2Q8N6L1 136 aa12.93□□□□□ -0.34
CDKN1A-202ENST00000373711 OR56A1Q8NGH5 318 aa12.93□□□□□ -0.34
CDKN1A-202ENST00000373711 OR52E4Q8NGH9 312 aa12.93□□□□□ -0.34
CDKN1A-202ENST00000373711 OR9I1Q8NGQ6 314 aa12.93□□□□□ -0.34
CDKN1A-202ENST00000373711 MTERF3Q96E29 417 aa12.93□□□□□ -0.34
CDKN1A-202ENST00000373711 FAM120BQ96EK7 910 aaKnown RBP12.93□□□□□ -0.34
CDKN1A-202ENST00000373711 LRRC37BQ96QE4 947 aa12.93□□□□□ -0.34
CDKN1A-202ENST00000373711 SNX18Q96RF0 628 aa12.93□□□□□ -0.34
CDKN1A-202ENST00000373711 KATNB1Q9BVA0 655 aa12.93□□□□□ -0.34
CDKN1A-202ENST00000373711 LAT2Q9GZY6 243 aa12.93□□□□□ -0.34
CDKN1A-202ENST00000373711 PLK3Q9H4B4 646 aa12.93□□□□□ -0.34
CDKN1A-202ENST00000373711 GRIP1Q9Y3R0 1128 aa12.93□□□□□ -0.34
CDKN1A-202ENST00000373711 PDLIM1O00151 329 aa12.92□□□□□ -0.34
CDKN1A-202ENST00000373711 AKAP10O43572 662 aa12.92□□□□□ -0.34
CDKN1A-202ENST00000373711 CYP7B1O75881 506 aa12.92□□□□□ -0.34
CDKN1A-202ENST00000373711 RPL3P39023 403 aaKnown RBP12.92□□□□□ -0.34
CDKN1A-202ENST00000373711 APOBEC1P41238 236 aaKnown RBP12.92□□□□□ -0.34
CDKN1A-202ENST00000373711 ASMTP46597 345 aa12.92□□□□□ -0.34
CDKN1A-202ENST00000373711 CLK1P49759 484 aaKnown RBP12.92□□□□□ -0.34
CDKN1A-202ENST00000373711 RNF144AP50876 292 aaPredicted RBP12.92□□□□□ -0.34
CDKN1A-202ENST00000373711 SESN3P58005 492 aa12.92□□□□□ -0.34
CDKN1A-202ENST00000373711 LGALS3BPQ08380 585 aa12.92□□□□□ -0.34
CDKN1A-202ENST00000373711 PDE7AQ13946 482 aa12.92□□□□□ -0.34
CDKN1A-202ENST00000373711 AGKQ53H12 422 aa12.92□□□□□ -0.34
CDKN1A-202ENST00000373711 ZNF385BQ569K4 471 aa12.92□□□□□ -0.34
CDKN1A-202ENST00000373711 C9orf135Q5VTT2 229 aa12.92□□□□□ -0.34
CDKN1A-202ENST00000373711 RIMKLAQ8IXN7 391 aa12.92□□□□□ -0.34
CDKN1A-202ENST00000373711 WDR60Q8WVS4 1066 aa12.92□□□□□ -0.34
CDKN1A-202ENST00000373711 SLC38A2Q96QD8 506 aa12.92□□□□□ -0.34
CDKN1A-202ENST00000373711 THUMPD3Q9BV44 507 aaKnown RBP12.92□□□□□ -0.34
CDKN1A-202ENST00000373711 DPY30Q9C005 99 aa12.92□□□□□ -0.34
CDKN1A-202ENST00000373711 QRSL1Q9H0R6 528 aaKnown RBP12.92□□□□□ -0.34
CDKN1A-202ENST00000373711 ZIM2Q9NZV7 527 aa12.92□□□□□ -0.34
CDKN1A-202ENST00000373711 CHRNA9Q9UGM1 479 aa12.92□□□□□ -0.34
CDKN1A-202ENST00000373711 SERINC4A6NH21 518 aa12.91□□□□□ -0.34
CDKN1A-202ENST00000373711 NPIPB9F8W1W9 429 aa12.91□□□□□ -0.34
CDKN1A-202ENST00000373711 EIF1BO60739 113 aaKnown RBP12.91□□□□□ -0.34
CDKN1A-202ENST00000373711 LILRA1O75019 489 aa12.91□□□□□ -0.34
CDKN1A-202ENST00000373711 SLC22A3O75751 556 aa12.91□□□□□ -0.34
CDKN1A-202ENST00000373711 OR4A8P0C604 315 aa12.91□□□□□ -0.34
CDKN1A-202ENST00000373711 IFNGR1P15260 489 aa12.91□□□□□ -0.34
CDKN1A-202ENST00000373711 HPCAL1P37235 193 aa12.91□□□□□ -0.34
CDKN1A-202ENST00000373711 KHKP50053 298 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms