RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 CRNNQ9UBG3 495 aaPredicted RBP17.82■□□□□ 0.44
HDAC1-201ENST00000373548 SIRT4Q9Y6E7 314 aaPredicted RBP17.82■□□□□ 0.44
HDAC1-201ENST00000373548 TRBV11-1A0A0K0K1C0 115 aa17.81■□□□□ 0.44
HDAC1-201ENST00000373548 OR6C68A6NDL8 312 aa17.81■□□□□ 0.44
HDAC1-201ENST00000373548 TMEM200CA6NKL6 621 aa17.81■□□□□ 0.44
HDAC1-201ENST00000373548 CXCR1P25024 350 aa17.81■□□□□ 0.44
HDAC1-201ENST00000373548 SDC2P34741 201 aa17.81■□□□□ 0.44
HDAC1-201ENST00000373548 P2RX1P51575 399 aa17.81■□□□□ 0.44
HDAC1-201ENST00000373548 CBFBQ13951 182 aa17.81■□□□□ 0.44
HDAC1-201ENST00000373548 POMZP3Q6PJE2 187 aa17.81■□□□□ 0.44
HDAC1-201ENST00000373548 GHDCQ8N2G8 530 aa17.81■□□□□ 0.44
HDAC1-201ENST00000373548 BMPERQ8N8U9 685 aa17.81■□□□□ 0.44
HDAC1-201ENST00000373548 OR51L1Q8NGJ5 315 aa17.81■□□□□ 0.44
HDAC1-201ENST00000373548 ZNRF4Q8WWF5 429 aa17.81■□□□□ 0.44
HDAC1-201ENST00000373548 Q96M85 177 aa17.81■□□□□ 0.44
HDAC1-201ENST00000373548 MED18Q9BUE0 208 aa17.81■□□□□ 0.44
HDAC1-201ENST00000373548 NMNAT2Q9BZQ4 307 aa17.81■□□□□ 0.44
HDAC1-201ENST00000373548 ZMIZ1Q9ULJ6 1067 aa17.81■□□□□ 0.44
HDAC1-201ENST00000373548 CPNE3O75131 537 aaKnown RBP17.81■□□□□ 0.44
HDAC1-201ENST00000373548 CD14P08571 375 aa17.81■□□□□ 0.44
HDAC1-201ENST00000373548 GP1BBP13224 206 aa17.81■□□□□ 0.44
HDAC1-201ENST00000373548 ZNF28P17035 718 aa17.81■□□□□ 0.44
HDAC1-201ENST00000373548 RPS5P46782 204 aaKnown RBP17.81■□□□□ 0.44
HDAC1-201ENST00000373548 FBXW4P57775 412 aa17.81■□□□□ 0.44
HDAC1-201ENST00000373548 ZNF45Q02386 682 aa17.81■□□□□ 0.44
HDAC1-201ENST00000373548 ZFP36L1Q07352 338 aaKnown RBP17.81■□□□□ 0.44
HDAC1-201ENST00000373548 MRPL14Q6P1L8 145 aaKnown RBP17.81■□□□□ 0.44
HDAC1-201ENST00000373548 TMEM205Q6UW68 189 aa17.81■□□□□ 0.44
HDAC1-201ENST00000373548 FAM122BQ7Z309 247 aa17.81■□□□□ 0.44
HDAC1-201ENST00000373548 PARP16Q8N5Y8 322 aa17.81■□□□□ 0.44
HDAC1-201ENST00000373548 DUSP19Q8WTR2 217 aa17.81■□□□□ 0.44
HDAC1-201ENST00000373548 ATOH1Q92858 354 aaPredicted RBP17.81■□□□□ 0.44
HDAC1-201ENST00000373548 C8orf44Q96CB5 159 aa17.81■□□□□ 0.44
HDAC1-201ENST00000373548 HDHD5Q9BXW7 423 aa17.81■□□□□ 0.44
HDAC1-201ENST00000373548 ASB6Q9NWX5 421 aa17.81■□□□□ 0.44
HDAC1-201ENST00000373548 GALNT8Q9NY28 637 aa17.81■□□□□ 0.44
HDAC1-201ENST00000373548 GSTK1Q9Y2Q3 226 aa17.81■□□□□ 0.44
HDAC1-201ENST00000373548 WDR87Q6ZQQ6 2873 aa17.8■□□□□ 0.44
HDAC1-201ENST00000373548 TEX13CA0A0J9YWL9 993 aa17.8■□□□□ 0.44
HDAC1-201ENST00000373548 A0A1W2PQL4 384 aaPredicted RBP17.8■□□□□ 0.44
HDAC1-201ENST00000373548 TMEM221A6NGB7 291 aa17.8■□□□□ 0.44
HDAC1-201ENST00000373548 M0R296 226 aa17.8■□□□□ 0.44
HDAC1-201ENST00000373548 TFP02787 698 aa17.8■□□□□ 0.44
HDAC1-201ENST00000373548 HLA-DPB1P04440 258 aa17.8■□□□□ 0.44
HDAC1-201ENST00000373548 ETV6P41212 452 aa17.8■□□□□ 0.44
HDAC1-201ENST00000373548 RAB15P59190 212 aa17.8■□□□□ 0.44
HDAC1-201ENST00000373548 ACTC1P68032 377 aa17.8■□□□□ 0.44
HDAC1-201ENST00000373548 ACTA1P68133 377 aa17.8■□□□□ 0.44
HDAC1-201ENST00000373548 TRA2AQ13595 282 aaKnown RBP eCLIP17.8■□□□□ 0.447e-6■■■■□ 25.8
HDAC1-201ENST00000373548 EFR3AQ14156 821 aa17.8■□□□□ 0.44
HDAC1-201ENST00000373548 GGTLC2Q14390 218 aa17.8■□□□□ 0.44
HDAC1-201ENST00000373548 QPRTQ15274 297 aa17.8■□□□□ 0.44
HDAC1-201ENST00000373548 ALG10Q5BKT4 473 aa17.8■□□□□ 0.44
HDAC1-201ENST00000373548 SSX6Q7RTT6 188 aa17.8■□□□□ 0.44
HDAC1-201ENST00000373548 CCDC190Q86UF4 302 aa17.8■□□□□ 0.44
HDAC1-201ENST00000373548 GPR119Q8TDV5 335 aa17.8■□□□□ 0.44
HDAC1-201ENST00000373548 COX4I2Q96KJ9 171 aa17.8■□□□□ 0.44
HDAC1-201ENST00000373548 COQ7Q99807 217 aa17.8■□□□□ 0.44
HDAC1-201ENST00000373548 FAIMQ9NVQ4 179 aa17.8■□□□□ 0.44
HDAC1-201ENST00000373548 C4orf47A7E2U8 309 aa17.8■□□□□ 0.44
HDAC1-201ENST00000373548 GABRPO00591 440 aa17.8■□□□□ 0.44
HDAC1-201ENST00000373548 MT-ND5P03915 603 aa17.8■□□□□ 0.44
HDAC1-201ENST00000373548 APEHP13798 732 aaKnown RBP17.8■□□□□ 0.44
HDAC1-201ENST00000373548 SLC26A5P58743 744 aa17.8■□□□□ 0.44
HDAC1-201ENST00000373548 CTXN1P60606 82 aa17.8■□□□□ 0.44
HDAC1-201ENST00000373548 RPL18Q07020 188 aaKnown RBP17.8■□□□□ 0.44
HDAC1-201ENST00000373548 GPR50Q13585 617 aa17.8■□□□□ 0.44
HDAC1-201ENST00000373548 INSL4Q14641 139 aa17.8■□□□□ 0.44
HDAC1-201ENST00000373548 C1QL3Q5VWW1 255 aa17.8■□□□□ 0.44
HDAC1-201ENST00000373548 RFLNBQ8N5W9 214 aa17.8■□□□□ 0.44
HDAC1-201ENST00000373548 AGBL5Q8NDL9 886 aa17.8■□□□□ 0.44
HDAC1-201ENST00000373548 B4GALNT2Q8NHY0 566 aa17.8■□□□□ 0.44
HDAC1-201ENST00000373548 ABTB1Q969K4 478 aaPredicted RBP17.8■□□□□ 0.44
HDAC1-201ENST00000373548 C4orf36Q96KX1 117 aa17.8■□□□□ 0.44
HDAC1-201ENST00000373548 MROQ9BYG7 248 aa17.8■□□□□ 0.44
HDAC1-201ENST00000373548 FKRPQ9H9S5 495 aa17.8■□□□□ 0.44
HDAC1-201ENST00000373548 TRIM36Q9NQ86 728 aa17.8■□□□□ 0.44
HDAC1-201ENST00000373548 ZNF229Q9UJW7 825 aa17.8■□□□□ 0.44
HDAC1-201ENST00000373548 IQCMA0A1B0GVH7 501 aa17.79■□□□□ 0.44
HDAC1-201ENST00000373548 E9PI62 339 aa17.79■□□□□ 0.44
HDAC1-201ENST00000373548 RNF13O43567 381 aa17.79■□□□□ 0.44
HDAC1-201ENST00000373548 BGLAPP02818 100 aa17.79■□□□□ 0.44
HDAC1-201ENST00000373548 F13BP05160 661 aa17.79■□□□□ 0.44
HDAC1-201ENST00000373548 OCM2P0CE71 109 aa17.79■□□□□ 0.44
HDAC1-201ENST00000373548 OCMP0CE72 109 aaPredicted RBP17.79■□□□□ 0.44
HDAC1-201ENST00000373548 SPI1P17947 270 aa17.79■□□□□ 0.44
HDAC1-201ENST00000373548 CDKN2AP42771 156 aaKnown RBP17.79■□□□□ 0.44
HDAC1-201ENST00000373548 DIO1P49895 249 aa17.79■□□□□ 0.44
HDAC1-201ENST00000373548 HCCSP53701 268 aa17.79■□□□□ 0.44
HDAC1-201ENST00000373548 LGALS3BPQ08380 585 aa17.79■□□□□ 0.44
HDAC1-201ENST00000373548 HNRNPA0Q13151 305 aaKnown RBP17.79■□□□□ 0.44
HDAC1-201ENST00000373548 PON3Q15166 354 aa17.79■□□□□ 0.44
HDAC1-201ENST00000373548 LCN1P1Q5VSP4 162 aa17.79■□□□□ 0.44
HDAC1-201ENST00000373548 FAM69BQ5VUD6 431 aa17.79■□□□□ 0.44
HDAC1-201ENST00000373548 NANOGNBQ7Z5D8 188 aa17.79■□□□□ 0.44
HDAC1-201ENST00000373548 MARCH9Q86YJ5 346 aa17.79■□□□□ 0.44
HDAC1-201ENST00000373548 POMGNT2Q8NAT1 580 aa17.79■□□□□ 0.44
HDAC1-201ENST00000373548 CNN2Q99439 309 aaKnown RBP17.79■□□□□ 0.44
HDAC1-201ENST00000373548 RXFP3Q9NSD7 469 aa17.79■□□□□ 0.44
HDAC1-201ENST00000373548 PLEKHB1Q9UF11 243 aaPredicted RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms