RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 SLC25A35Q3KQZ1 300 aa17.1■□□□□ 0.33
USP49-202ENST00000373010 SFXN4Q6P4A7 337 aa17.1■□□□□ 0.33
USP49-202ENST00000373010 RDH10Q8IZV5 341 aa17.1■□□□□ 0.33
USP49-202ENST00000373010 OR6F1Q8NGZ6 308 aa17.1■□□□□ 0.33
USP49-202ENST00000373010 ADIPOR1Q96A54 375 aa17.1■□□□□ 0.33
USP49-202ENST00000373010 LCORQ96JN0 433 aaPredicted RBP17.1■□□□□ 0.33
USP49-202ENST00000373010 SLC19A3Q9BZV2 496 aa17.1■□□□□ 0.33
USP49-202ENST00000373010 GNG8Q9UK08 70 aa17.1■□□□□ 0.33
USP49-202ENST00000373010 MRPS17Q9Y2R5 130 aaKnown RBP17.1■□□□□ 0.33
USP49-202ENST00000373010 RP1P56715 2156 aa17.1■□□□□ 0.33
USP49-202ENST00000373010 SPEGQ15772 3267 aa17.1■□□□□ 0.33
USP49-202ENST00000373010 MYO15AQ9UKN7 3530 aa17.1■□□□□ 0.33
USP49-202ENST00000373010 A0A0G2JMP0 313 aa17.1■□□□□ 0.33
USP49-202ENST00000373010 A0A0X1KG70 313 aa17.1■□□□□ 0.33
USP49-202ENST00000373010 ARPC3O15145 178 aa17.1■□□□□ 0.33
USP49-202ENST00000373010 ICOSLGO75144 302 aa17.1■□□□□ 0.33
USP49-202ENST00000373010 IGKV3-11P04433 115 aa17.1■□□□□ 0.33
USP49-202ENST00000373010 EIF4EP06730 217 aaKnown RBP17.1■□□□□ 0.33
USP49-202ENST00000373010 GRK6P43250 576 aa17.1■□□□□ 0.33
USP49-202ENST00000373010 ZP2Q05996 745 aa17.1■□□□□ 0.33
USP49-202ENST00000373010 LGALS3BPQ08380 585 aa17.1■□□□□ 0.33
USP49-202ENST00000373010 BIKQ13323 160 aa17.1■□□□□ 0.33
USP49-202ENST00000373010 SMAD2Q15796 467 aaKnown RBP17.1■□□□□ 0.33
USP49-202ENST00000373010 ZNF74Q16587 644 aa17.1■□□□□ 0.33
USP49-202ENST00000373010 C1orf189Q5VU69 101 aa17.1■□□□□ 0.33
USP49-202ENST00000373010 NCCRP1Q6ZVX7 275 aaPredicted RBP17.1■□□□□ 0.33
USP49-202ENST00000373010 OR4M2Q8NGB6 313 aa17.1■□□□□ 0.33
USP49-202ENST00000373010 OR14A16Q8NHC5 309 aa17.1■□□□□ 0.33
USP49-202ENST00000373010 ENKURQ8TC29 256 aa17.1■□□□□ 0.33
USP49-202ENST00000373010 OR1F2PQ96R84 312 aa17.1■□□□□ 0.33
USP49-202ENST00000373010 NMNAT2Q9BZQ4 307 aa17.1■□□□□ 0.33
USP49-202ENST00000373010 PCED1AQ9H1Q7 454 aa17.1■□□□□ 0.33
USP49-202ENST00000373010 ZNF346Q9UL40 294 aaKnown RBP17.1■□□□□ 0.33
USP49-202ENST00000373010 RBMX2Q9Y388 322 aaKnown RBP17.1■□□□□ 0.33
USP49-202ENST00000373010 FRG2CA6NGY1 282 aa17.09■□□□□ 0.33
USP49-202ENST00000373010 PAHP00439 452 aa17.09■□□□□ 0.33
USP49-202ENST00000373010 PNMTP11086 282 aa17.09■□□□□ 0.33
USP49-202ENST00000373010 GRPRP30550 384 aa17.09■□□□□ 0.33
USP49-202ENST00000373010 CSF2RBP32927 897 aa17.09■□□□□ 0.33
USP49-202ENST00000373010 PSMB10P40306 273 aa17.09■□□□□ 0.33
USP49-202ENST00000373010 CDKN2AP42771 156 aaKnown RBP17.09■□□□□ 0.33
USP49-202ENST00000373010 EGR4Q05215 589 aa17.09■□□□□ 0.33
USP49-202ENST00000373010 LTBQ06643 244 aa17.09■□□□□ 0.33
USP49-202ENST00000373010 LEG1Q6P5S2 330 aa17.09■□□□□ 0.33
USP49-202ENST00000373010 SYT9Q86SS6 491 aa17.09■□□□□ 0.33
USP49-202ENST00000373010 SLITRK4Q8IW52 837 aa17.09■□□□□ 0.33
USP49-202ENST00000373010 SAMD12Q8N8I0 201 aa17.09■□□□□ 0.33
USP49-202ENST00000373010 SNX33Q8WV41 574 aa17.09■□□□□ 0.33
USP49-202ENST00000373010 TMEM43Q9BTV4 400 aa17.09■□□□□ 0.33
USP49-202ENST00000373010 NCDNQ9UBB6 729 aa17.09■□□□□ 0.33
USP49-202ENST00000373010 PCDHGB7Q9Y5F8 929 aa17.09■□□□□ 0.33
USP49-202ENST00000373010 OGG1O15527 345 aa17.09■□□□□ 0.33
USP49-202ENST00000373010 MAP2K3P46734 347 aa17.09■□□□□ 0.33
USP49-202ENST00000373010 GDI2P50395 445 aaKnown RBP17.09■□□□□ 0.33
USP49-202ENST00000373010 GBX2P52951 348 aaPredicted RBP17.09■□□□□ 0.33
USP49-202ENST00000373010 PRPS1P60891 318 aa17.09■□□□□ 0.33
USP49-202ENST00000373010 RIN1Q13671 783 aa17.09■□□□□ 0.33
USP49-202ENST00000373010 CDK5R1Q15078 307 aa17.09■□□□□ 0.33
USP49-202ENST00000373010 CDONQ4KMG0 1287 aa17.09■□□□□ 0.33
USP49-202ENST00000373010 ATAD3CQ5T2N8 411 aa17.09■□□□□ 0.33
USP49-202ENST00000373010 SLC35F3Q8IY50 421 aa17.09■□□□□ 0.33
USP49-202ENST00000373010 OR4M1Q8NGD0 313 aa17.09■□□□□ 0.33
USP49-202ENST00000373010 THAP4Q8WY91 577 aa17.09■□□□□ 0.33
USP49-202ENST00000373010 NANSQ9NR45 359 aa17.09■□□□□ 0.33
USP49-202ENST00000373010 ACOXLQ9NUZ1 547 aa17.09■□□□□ 0.33
USP49-202ENST00000373010 ZNF221Q9UK13 617 aa17.09■□□□□ 0.33
USP49-202ENST00000373010 A0A0B4J293 547 aa17.08■□□□□ 0.33
USP49-202ENST00000373010 PTBP1P26599 531 aaKnown RBP eCLIP17.08■□□□□ 0.33
USP49-202ENST00000373010 ACTA2P62736 377 aa17.08■□□□□ 0.33
USP49-202ENST00000373010 ACTG2P63267 376 aa17.08■□□□□ 0.33
USP49-202ENST00000373010 SIRPAP78324 504 aa17.08■□□□□ 0.33
USP49-202ENST00000373010 TPRA1Q86W33 373 aa17.08■□□□□ 0.33
USP49-202ENST00000373010 SYS1Q8N2H4 156 aa17.08■□□□□ 0.33
USP49-202ENST00000373010 ZNF563Q8TA94 476 aa17.08■□□□□ 0.33
USP49-202ENST00000373010 DNAJA3Q96EY1 480 aa17.08■□□□□ 0.33
USP49-202ENST00000373010 FAM210AQ96ND0 272 aa17.08■□□□□ 0.33
USP49-202ENST00000373010 TSSK2Q96PF2 358 aa17.08■□□□□ 0.33
USP49-202ENST00000373010 RNF121Q9H920 327 aa17.08■□□□□ 0.33
USP49-202ENST00000373010 MMP25Q9NPA2 562 aa17.08■□□□□ 0.33
USP49-202ENST00000373010 RPRD1BQ9NQG5 326 aaKnown RBP17.08■□□□□ 0.33
USP49-202ENST00000373010 FER1L5A0AVI2 2057 aa17.08■□□□□ 0.32
USP49-202ENST00000373010 A0A1B0GVT2 93 aa17.08■□□□□ 0.32
USP49-202ENST00000373010 PSMD9O00233 223 aa17.08■□□□□ 0.32
USP49-202ENST00000373010 F13BP05160 661 aa17.08■□□□□ 0.32
USP49-202ENST00000373010 KRT8P05787 483 aa17.08■□□□□ 0.32
USP49-202ENST00000373010 FBLP22087 321 aaKnown RBP17.08■□□□□ 0.32
USP49-202ENST00000373010 CHRDL2Q6WN34 429 aa17.08■□□□□ 0.32
USP49-202ENST00000373010 C9orf40Q8IXQ3 194 aa17.08■□□□□ 0.32
USP49-202ENST00000373010 SLC25A45Q8N413 288 aa17.08■□□□□ 0.32
USP49-202ENST00000373010 MS4A15Q8N5U1 240 aa17.08■□□□□ 0.32
USP49-202ENST00000373010 SMIM19Q96E16 107 aa17.08■□□□□ 0.32
USP49-202ENST00000373010 KTI12Q96EK9 354 aaPredicted RBP17.08■□□□□ 0.32
USP49-202ENST00000373010 GPX7Q96SL4 187 aaPredicted RBP17.08■□□□□ 0.32
USP49-202ENST00000373010 EXOSC3Q9NQT5 275 aaKnown RBP17.08■□□□□ 0.32
USP49-202ENST00000373010 CYSLTR2Q9NS75 346 aa17.08■□□□□ 0.32
USP49-202ENST00000373010 CABIN1Q9Y6J0 2220 aa17.08■□□□□ 0.32
USP49-202ENST00000373010 A0A0C4DFX4 3053 aa17.07■□□□□ 0.32
USP49-202ENST00000373010 IDSB3KWA1 339 aa17.07■□□□□ 0.32
USP49-202ENST00000373010 EDNRAP25101 427 aa17.07■□□□□ 0.32
USP49-202ENST00000373010 TACR3P29371 465 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms