RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 SEC61A1P61619 476 aaKnown RBP13.62□□□□□ -0.23
COL9A2-202ENST00000372748 TMEM69Q5SWH9 247 aa13.62□□□□□ -0.23
COL9A2-202ENST00000372748 AGBL4Q5VU57 503 aa13.62□□□□□ -0.23
COL9A2-202ENST00000372748 FBXO46Q6PJ61 603 aaPredicted RBP13.62□□□□□ -0.23
COL9A2-202ENST00000372748 BAIAP2L2Q6UXY1 529 aa13.62□□□□□ -0.23
COL9A2-202ENST00000372748 OVCH2Q7RTZ1 564 aa13.62□□□□□ -0.23
COL9A2-202ENST00000372748 OR6V1Q8N148 313 aa13.62□□□□□ -0.23
COL9A2-202ENST00000372748 RAB42Q8N4Z0 105 aa13.62□□□□□ -0.23
COL9A2-202ENST00000372748 LCORQ96JN0 433 aaPredicted RBP13.62□□□□□ -0.23
COL9A2-202ENST00000372748 SDF2Q99470 211 aa13.62□□□□□ -0.23
COL9A2-202ENST00000372748 GPR174Q9BXC1 333 aa13.62□□□□□ -0.23
COL9A2-202ENST00000372748 ZCCHC4Q9H5U6 513 aa13.62□□□□□ -0.23
COL9A2-202ENST00000372748 ADAP2Q9NPF8 381 aa13.62□□□□□ -0.23
COL9A2-202ENST00000372748 OR2M5A3KFT3 312 aa13.61□□□□□ -0.23
COL9A2-202ENST00000372748 IFITM5A6NNB3 132 aa13.61□□□□□ -0.23
COL9A2-202ENST00000372748 IMPA2O14732 288 aa13.61□□□□□ -0.23
COL9A2-202ENST00000372748 ADH7P40394 386 aa13.61□□□□□ -0.23
COL9A2-202ENST00000372748 H2BFSP57053 126 aa13.61□□□□□ -0.23
COL9A2-202ENST00000372748 RAP2BP61225 183 aa13.61□□□□□ -0.23
COL9A2-202ENST00000372748 GRM7Q14831 915 aa13.61□□□□□ -0.23
COL9A2-202ENST00000372748 TRMT12Q53H54 448 aaKnown RBP13.61□□□□□ -0.23
COL9A2-202ENST00000372748 FIGNL1Q6PIW4 674 aa13.61□□□□□ -0.23
COL9A2-202ENST00000372748 TMUB2Q71RG4 321 aa13.61□□□□□ -0.23
COL9A2-202ENST00000372748 HDDC3Q8N4P3 179 aa13.61□□□□□ -0.23
COL9A2-202ENST00000372748 SYNPRQ8TBG9 265 aa13.61□□□□□ -0.23
COL9A2-202ENST00000372748 ST8SIA2Q92186 375 aa13.61□□□□□ -0.23
COL9A2-202ENST00000372748 FGF13Q92913 245 aa13.61□□□□□ -0.23
COL9A2-202ENST00000372748 ASB16Q96NS5 453 aa13.61□□□□□ -0.23
COL9A2-202ENST00000372748 MS4A4EQ96PG1 132 aa13.61□□□□□ -0.23
COL9A2-202ENST00000372748 PITHD1Q9GZP4 211 aaPredicted RBP13.61□□□□□ -0.23
COL9A2-202ENST00000372748 CAPN10Q9HC96 672 aa13.61□□□□□ -0.23
COL9A2-202ENST00000372748 FBXO9Q9UK97 447 aaPredicted RBP13.61□□□□□ -0.23
COL9A2-202ENST00000372748 MED31Q9Y3C7 131 aa13.61□□□□□ -0.23
COL9A2-202ENST00000372748 SPTBP11277 2137 aa13.61□□□□□ -0.23
COL9A2-202ENST00000372748 TP53BP1Q12888 1972 aaPredicted RBP13.61□□□□□ -0.23
COL9A2-202ENST00000372748 OGG1O15527 345 aa13.61□□□□□ -0.23
COL9A2-202ENST00000372748 SPDEFO95238 335 aa13.61□□□□□ -0.23
COL9A2-202ENST00000372748 EN2P19622 333 aaPredicted RBP13.61□□□□□ -0.23
COL9A2-202ENST00000372748 PTH2RP49190 550 aa13.61□□□□□ -0.23
COL9A2-202ENST00000372748 ACTC1P68032 377 aa13.61□□□□□ -0.23
COL9A2-202ENST00000372748 ACTA1P68133 377 aa13.61□□□□□ -0.23
COL9A2-202ENST00000372748 DHODHQ02127 395 aa13.61□□□□□ -0.23
COL9A2-202ENST00000372748 ZNF626Q68DY1 528 aa13.61□□□□□ -0.23
COL9A2-202ENST00000372748 SPICQ8N5J4 248 aa13.61□□□□□ -0.23
COL9A2-202ENST00000372748 ZNF614Q8N883 585 aa13.61□□□□□ -0.23
COL9A2-202ENST00000372748 ZNF454Q8N9F8 522 aa13.61□□□□□ -0.23
COL9A2-202ENST00000372748 BVESQ8NE79 360 aa13.61□□□□□ -0.23
COL9A2-202ENST00000372748 ZNRF4Q8WWF5 429 aa13.61□□□□□ -0.23
COL9A2-202ENST00000372748 TAS2R5Q9NYW4 299 aa13.61□□□□□ -0.23
COL9A2-202ENST00000372748 RABL2AQ9UBK7 228 aaPredicted RBP13.61□□□□□ -0.23
COL9A2-202ENST00000372748 ACSL5Q9ULC5 683 aa13.61□□□□□ -0.23
COL9A2-202ENST00000372748 PYCARD-AS1I3L0S3 204 aa13.61□□□□□ -0.23
COL9A2-202ENST00000372748 ECDO95905 644 aaPredicted RBP13.61□□□□□ -0.23
COL9A2-202ENST00000372748 TMIGD3P0DMS9 266 aaPredicted RBP13.61□□□□□ -0.23
COL9A2-202ENST00000372748 P2RX1P51575 399 aa13.61□□□□□ -0.23
COL9A2-202ENST00000372748 ARFIP1P53367 373 aa13.61□□□□□ -0.23
COL9A2-202ENST00000372748 AP3S2P59780 193 aa13.61□□□□□ -0.23
COL9A2-202ENST00000372748 PSRC1Q6PGN9 363 aaPredicted RBP13.61□□□□□ -0.23
COL9A2-202ENST00000372748 OVCH1Q7RTY7 1134 aa13.61□□□□□ -0.23
COL9A2-202ENST00000372748 RELL2Q8NC24 303 aaPredicted RBP13.61□□□□□ -0.23
COL9A2-202ENST00000372748 TTLQ8NG68 377 aa13.61□□□□□ -0.23
COL9A2-202ENST00000372748 SCARB1Q8WTV0 552 aa13.61□□□□□ -0.23
COL9A2-202ENST00000372748 BADQ92934 168 aa13.61□□□□□ -0.23
COL9A2-202ENST00000372748 RAB7BQ96AH8 199 aa13.61□□□□□ -0.23
COL9A2-202ENST00000372748 DPYSL5Q9BPU6 564 aa13.61□□□□□ -0.23
COL9A2-202ENST00000372748 TEX101Q9BY14 249 aa13.61□□□□□ -0.23
COL9A2-202ENST00000372748 LDAHQ9H6V9 325 aa13.61□□□□□ -0.23
COL9A2-202ENST00000372748 IFT46Q9NQC8 304 aa13.61□□□□□ -0.23
COL9A2-202ENST00000372748 AKAP7Q9P0M2 348 aaPredicted RBP13.61□□□□□ -0.23
COL9A2-202ENST00000372748 H3BSH0 61 aa13.6□□□□□ -0.23
COL9A2-202ENST00000372748 DNAJB6O75190 326 aa13.6□□□□□ -0.23
COL9A2-202ENST00000372748 LYPD3O95274 346 aa13.6□□□□□ -0.23
COL9A2-202ENST00000372748 RLN1P04808 185 aa13.6□□□□□ -0.23
COL9A2-202ENST00000372748 ZNF35P13682 527 aa13.6□□□□□ -0.23
COL9A2-202ENST00000372748 CPN1P15169 458 aa13.6□□□□□ -0.23
COL9A2-202ENST00000372748 CDK2P24941 298 aa13.6□□□□□ -0.23
COL9A2-202ENST00000372748 DPP4P27487 766 aa13.6□□□□□ -0.23
COL9A2-202ENST00000372748 STX4Q12846 297 aa13.6□□□□□ -0.23
COL9A2-202ENST00000372748 IL21RQ9HBE5 538 aa13.6□□□□□ -0.23
COL9A2-202ENST00000372748 ZNF275Q9NSD4 429 aaPredicted RBP13.6□□□□□ -0.23
COL9A2-202ENST00000372748 C2orf42Q9NWW7 574 aa13.6□□□□□ -0.23
COL9A2-202ENST00000372748 TRBV23OR9-2A0A075B6M9 112 aa13.6□□□□□ -0.23
COL9A2-202ENST00000372748 TBC1D3EA0A087X179 549 aa13.6□□□□□ -0.23
COL9A2-202ENST00000372748 LINC01553A4QN01 128 aa13.6□□□□□ -0.23
COL9A2-202ENST00000372748 OR2A4O95047 310 aa13.6□□□□□ -0.23
COL9A2-202ENST00000372748 IGF2P01344 180 aa13.6□□□□□ -0.23
COL9A2-202ENST00000372748 FGF2P09038 288 aa13.6□□□□□ -0.23
COL9A2-202ENST00000372748 VSIG10L2P0DP72 767 aa13.6□□□□□ -0.23
COL9A2-202ENST00000372748 GABRA1P14867 456 aa13.6□□□□□ -0.23
COL9A2-202ENST00000372748 HIST1H1CP16403 213 aaKnown RBP13.6□□□□□ -0.23
COL9A2-202ENST00000372748 TYRP1P17643 537 aa13.6□□□□□ -0.23
COL9A2-202ENST00000372748 PEBP1P30086 187 aaKnown RBP13.6□□□□□ -0.23
COL9A2-202ENST00000372748 DUSP8Q13202 625 aa13.6□□□□□ -0.23
COL9A2-202ENST00000372748 CST6Q15828 149 aa13.6□□□□□ -0.23
COL9A2-202ENST00000372748 AMZ1Q400G9 498 aa13.6□□□□□ -0.23
COL9A2-202ENST00000372748 ELFN2Q5R3F8 820 aa13.6□□□□□ -0.23
COL9A2-202ENST00000372748 NRROSQ86YC3 692 aa13.6□□□□□ -0.23
COL9A2-202ENST00000372748 DNAAF1Q8NEP3 725 aa13.6□□□□□ -0.23
COL9A2-202ENST00000372748 OR1S1Q8NH92 325 aa13.6□□□□□ -0.23
COL9A2-202ENST00000372748 SMARCD2Q92925 531 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms