RNA–Protein interactions for RNA: ENST00000372407.4

PTPRF-203, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,600 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-203ENST00000372407 GIMAP1Q8WWP7 306 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 PPA2Q9H2U2 334 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 GLIPR2Q9H4G4 154 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 ACKR4Q9NPB9 350 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 UGT2A1Q9Y4X1 527 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 MICAL3Q7RTP6 2002 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 LOC102725191A0A1B0GVB3 256 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 GFRA2O00451 464 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 IRF2P14316 349 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 CTGFP29279 349 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 YPEL5P62699 121 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 ZNF169Q14929 603 aaPredicted RBP10.62□□□□□ -0.71
PTPRF-203ENST00000372407 CNN3Q15417 329 aaKnown RBP10.62□□□□□ -0.71
PTPRF-203ENST00000372407 MPEG1Q2M385 716 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 OR51Q1Q8NH59 317 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 ABHD4Q8TB40 342 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 ABHD5Q8WTS1 349 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 RADILQ96JH8 1075 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 SORCS2Q96PQ0 1159 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 RPS10P5Q9NQ39 176 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 ATG4BQ9Y4P1 393 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 A0A1W2PS29 197 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 TMEM212A6NML5 194 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 FAM227AF5H4B4 570 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 TAPBPO15533 448 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 LIPAP38571 399 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 RAB38P57729 211 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 COX20Q5RI15 118 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 CLVS2Q5SYC1 327 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 SFXN4Q6P4A7 337 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 TMEM207Q6UWW9 146 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 GAREM2Q75VX8 874 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 VRK3Q8IV63 474 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 ZNF679Q8IYX0 411 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 FAM109AQ8N4B1 249 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 PHYHIPQ92561 330 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 AMDHD1Q96NU7 426 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 ATPIF1Q9UII2 106 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 TBX21Q9UL17 535 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 ARID1AO14497 2285 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 TMEM82A0PJX8 343 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 CD300LBA8K4G0 201 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 SLC43A1O75387 559 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 NCR1O76036 304 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 MT-CO2P00403 227 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 HOXB5P09067 269 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 NPPBP16860 134 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 MSX1P28360 303 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 ZNF136P52737 540 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 ISL1P61371 349 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 TUBB3Q13509 450 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 GALEQ14376 348 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 ADPRMQ3LIE5 342 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 TMEM240Q5SV17 173 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 LYPD4Q6UWN0 246 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 DLEU7Q6UYE1 221 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 TECPR1Q7Z6L1 1165 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 MMP21Q8N119 569 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 ZFAND1Q8TCF1 268 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 CHTF18Q8WVB6 975 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 TM4SF18Q96CE8 201 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 SENP5Q96HI0 755 aaPredicted RBP10.62□□□□□ -0.71
PTPRF-203ENST00000372407 SSX3Q99909 188 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 ANKRD19PQ9H560 264 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 A4GALTQ9NPC4 353 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 NRIP3Q9NQ35 241 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 KIF25Q9UIL4 384 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 FBXO7Q9Y3I1 522 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 TIMM8BQ9Y5J9 83 aaPredicted RBP10.62□□□□□ -0.71
PTPRF-203ENST00000372407 SNX11Q9Y5W9 270 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 A0A1B0GUL6 1792 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 SCN4AP35499 1836 aa10.62□□□□□ -0.71
PTPRF-203ENST00000372407 RP1P56715 2156 aa10.61□□□□□ -0.71
PTPRF-203ENST00000372407 B4DXG7 233 aa10.61□□□□□ -0.71
PTPRF-203ENST00000372407 CPNE6O95741 557 aa10.61□□□□□ -0.71
PTPRF-203ENST00000372407 DBHP09172 617 aa10.61□□□□□ -0.71
PTPRF-203ENST00000372407 CD79AP11912 226 aa10.61□□□□□ -0.71
PTPRF-203ENST00000372407 MAKP20794 623 aa10.61□□□□□ -0.71
PTPRF-203ENST00000372407 HTR1FP30939 366 aa10.61□□□□□ -0.71
PTPRF-203ENST00000372407 ETV5P41161 510 aa10.61□□□□□ -0.71
PTPRF-203ENST00000372407 EFNA3P52797 238 aa10.61□□□□□ -0.71
PTPRF-203ENST00000372407 CLDN6P56747 220 aa10.61□□□□□ -0.71
PTPRF-203ENST00000372407 TGFBR3Q03167 851 aa10.61□□□□□ -0.71
PTPRF-203ENST00000372407 SLC14A1Q13336 389 aa10.61□□□□□ -0.71
PTPRF-203ENST00000372407 UBE2NLQ5JXB2 153 aa10.61□□□□□ -0.71
PTPRF-203ENST00000372407 OR5M10Q6IEU7 315 aa10.61□□□□□ -0.71
PTPRF-203ENST00000372407 OPN5Q6U736 354 aa10.61□□□□□ -0.71
PTPRF-203ENST00000372407 ARRDC3Q96B67 414 aa10.61□□□□□ -0.71
PTPRF-203ENST00000372407 ULBP2Q9BZM5 246 aa10.61□□□□□ -0.71
PTPRF-203ENST00000372407 TAAR2Q9P1P5 351 aa10.61□□□□□ -0.71
PTPRF-203ENST00000372407 MCTS1Q9ULC4 181 aaKnown RBP10.61□□□□□ -0.71
PTPRF-203ENST00000372407 A0A0D9SG52 128 aa10.61□□□□□ -0.71
PTPRF-203ENST00000372407 TRDV1A0A1B0GX56 115 aa10.61□□□□□ -0.71
PTPRF-203ENST00000372407 CDC14CA4D256 554 aa10.61□□□□□ -0.71
PTPRF-203ENST00000372407 EPHA1P21709 976 aa10.61□□□□□ -0.71
PTPRF-203ENST00000372407 PRKACBP22694 351 aa10.61□□□□□ -0.71
PTPRF-203ENST00000372407 GABRR1P24046 479 aa10.61□□□□□ -0.71
PTPRF-203ENST00000372407 FPR3P25089 353 aa10.61□□□□□ -0.71
PTPRF-203ENST00000372407 CD38P28907 300 aa10.61□□□□□ -0.71
PTPRF-203ENST00000372407 CLDN12P56749 244 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms