RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 NAA11Q9BSU3 229 aaPredicted RBP8.17□□□□□ -1.1
ATG4A-203ENST00000372232 IFT27Q9BW83 186 aa8.17□□□□□ -1.1
ATG4A-203ENST00000372232 RDH14Q9HBH5 336 aa8.17□□□□□ -1.1
ATG4A-203ENST00000372232 PARPBPQ9NWS1 579 aa8.17□□□□□ -1.1
ATG4A-203ENST00000372232 C2orf42Q9NWW7 574 aa8.17□□□□□ -1.1
ATG4A-203ENST00000372232 LTBP2Q14767 1821 aa8.16□□□□□ -1.1
ATG4A-203ENST00000372232 OBSL1O75147 1896 aa8.16□□□□□ -1.1
ATG4A-203ENST00000372232 A8MXE2 369 aa8.16□□□□□ -1.1
ATG4A-203ENST00000372232 GRM6O15303 877 aa8.16□□□□□ -1.1
ATG4A-203ENST00000372232 CCL16O15467 120 aa8.16□□□□□ -1.1
ATG4A-203ENST00000372232 DLEU1O43261 78 aa8.16□□□□□ -1.1
ATG4A-203ENST00000372232 OR2T1O43869 369 aa8.16□□□□□ -1.1
ATG4A-203ENST00000372232 OR10H2O60403 315 aa8.16□□□□□ -1.1
ATG4A-203ENST00000372232 CBR3O75828 277 aa8.16□□□□□ -1.1
ATG4A-203ENST00000372232 RHOP08100 348 aa8.16□□□□□ -1.1
ATG4A-203ENST00000372232 CLUP10909 449 aa8.16□□□□□ -1.1
ATG4A-203ENST00000372232 RAP1AP62834 184 aa8.16□□□□□ -1.1
ATG4A-203ENST00000372232 PPIAP62937 165 aaKnown RBP8.16□□□□□ -1.1
ATG4A-203ENST00000372232 B4GALNT1Q00973 533 aa8.16□□□□□ -1.1
ATG4A-203ENST00000372232 TPBGQ13641 420 aa8.16□□□□□ -1.1
ATG4A-203ENST00000372232 PMS2P11Q13670 270 aa8.16□□□□□ -1.1
ATG4A-203ENST00000372232 ARHGEF7Q14155 803 aa8.16□□□□□ -1.1
ATG4A-203ENST00000372232 TOMM34Q15785 309 aaPredicted RBP8.16□□□□□ -1.1
ATG4A-203ENST00000372232 SLC22A10Q63ZE4 541 aa8.16□□□□□ -1.1
ATG4A-203ENST00000372232 ZNF613Q6PF04 617 aa8.16□□□□□ -1.1
ATG4A-203ENST00000372232 TMIGD1Q6UXZ0 262 aa8.16□□□□□ -1.1
ATG4A-203ENST00000372232 RFLNAQ6ZTI6 216 aa8.16□□□□□ -1.1
ATG4A-203ENST00000372232 CBLL1Q75N03 491 aa8.16□□□□□ -1.1
ATG4A-203ENST00000372232 TPRA1Q86W33 373 aa8.16□□□□□ -1.1
ATG4A-203ENST00000372232 BEND2Q8NDZ0 799 aa8.16□□□□□ -1.1
ATG4A-203ENST00000372232 OR10G2Q8NGC3 310 aa8.16□□□□□ -1.1
ATG4A-203ENST00000372232 OR9Q2Q8NGE9 314 aa8.16□□□□□ -1.1
ATG4A-203ENST00000372232 CHFRQ96EP1 664 aa8.16□□□□□ -1.1
ATG4A-203ENST00000372232 C14orf79Q96F83 325 aa8.16□□□□□ -1.1
ATG4A-203ENST00000372232 CAMK1GQ96NX5 476 aa8.16□□□□□ -1.1
ATG4A-203ENST00000372232 PIGQQ9BRB3 760 aa8.16□□□□□ -1.1
ATG4A-203ENST00000372232 JAM3Q9BX67 310 aa8.16□□□□□ -1.1
ATG4A-203ENST00000372232 WDR26Q9H7D7 661 aa8.16□□□□□ -1.1
ATG4A-203ENST00000372232 MIEF1Q9NQG6 463 aa8.16□□□□□ -1.1
ATG4A-203ENST00000372232 NANSQ9NR45 359 aa8.16□□□□□ -1.1
ATG4A-203ENST00000372232 HCFC1R1Q9NWW0 138 aa8.16□□□□□ -1.1
ATG4A-203ENST00000372232 YARS2Q9Y2Z4 477 aaKnown RBP8.16□□□□□ -1.1
ATG4A-203ENST00000372232 SNX11Q9Y5W9 270 aa8.16□□□□□ -1.1
ATG4A-203ENST00000372232 IGLV3-16A0A075B6K0 115 aa8.15□□□□□ -1.1
ATG4A-203ENST00000372232 A0A0A6YYC8 382 aaPredicted RBP8.15□□□□□ -1.1
ATG4A-203ENST00000372232 TRDV1A0A1B0GX56 115 aa8.15□□□□□ -1.1
ATG4A-203ENST00000372232 IFITM10A6NMD0 228 aa8.15□□□□□ -1.1
ATG4A-203ENST00000372232 NUDT19A8MXV4 375 aa8.15□□□□□ -1.1
ATG4A-203ENST00000372232 I3L1I5 382 aaPredicted RBP8.15□□□□□ -1.1
ATG4A-203ENST00000372232 LDLRAD4O15165 306 aa8.15□□□□□ -1.1
ATG4A-203ENST00000372232 RGS14O43566 566 aa8.15□□□□□ -1.1
ATG4A-203ENST00000372232 ENTPD6O75354 484 aa8.15□□□□□ -1.1
ATG4A-203ENST00000372232 ITGA10O75578 1167 aa8.15□□□□□ -1.1
ATG4A-203ENST00000372232 STK16O75716 305 aa8.15□□□□□ -1.1
ATG4A-203ENST00000372232 GATBO75879 557 aaKnown RBP8.15□□□□□ -1.1
ATG4A-203ENST00000372232 EBLN1P0CF75 366 aa8.15□□□□□ -1.1
ATG4A-203ENST00000372232 GKN3PP0CG01 181 aa8.15□□□□□ -1.1
ATG4A-203ENST00000372232 MYOGP15173 224 aa8.15□□□□□ -1.1
ATG4A-203ENST00000372232 TBXA2RP21731 343 aa8.15□□□□□ -1.1
ATG4A-203ENST00000372232 CERS1P27544 350 aa8.15□□□□□ -1.1
ATG4A-203ENST00000372232 S100A2P29034 98 aa8.15□□□□□ -1.1
ATG4A-203ENST00000372232 MAP3K8P41279 467 aa8.15□□□□□ -1.1
ATG4A-203ENST00000372232 CDX1P47902 265 aaPredicted RBP8.15□□□□□ -1.1
ATG4A-203ENST00000372232 PNLIPRP2P54317 469 aa8.15□□□□□ -1.1
ATG4A-203ENST00000372232 HSD11B2P80365 405 aa8.15□□□□□ -1.1
ATG4A-203ENST00000372232 MRPS11P82912 194 aaKnown RBP8.15□□□□□ -1.1
ATG4A-203ENST00000372232 FABP5Q01469 135 aa8.15□□□□□ -1.1
ATG4A-203ENST00000372232 SURF2Q15527 256 aaPredicted RBP8.15□□□□□ -1.1
ATG4A-203ENST00000372232 TMEM35AQ53FP2 167 aa8.15□□□□□ -1.1
ATG4A-203ENST00000372232 NCMAPQ5T1S8 102 aa8.15□□□□□ -1.1
ATG4A-203ENST00000372232 CLEC9AQ6UXN8 241 aa8.15□□□□□ -1.1
ATG4A-203ENST00000372232 RNF165Q6ZSG1 346 aa8.15□□□□□ -1.1
ATG4A-203ENST00000372232 PTCHD4Q6ZW05 846 aa8.15□□□□□ -1.1
ATG4A-203ENST00000372232 VTCN1Q7Z7D3 282 aa8.15□□□□□ -1.1
ATG4A-203ENST00000372232 OAFQ86UD1 273 aa8.15□□□□□ -1.1
ATG4A-203ENST00000372232 ANGPTL5Q86XS5 388 aa8.15□□□□□ -1.1
ATG4A-203ENST00000372232 OR1S2Q8NGQ3 325 aa8.15□□□□□ -1.1
ATG4A-203ENST00000372232 C3orf49Q96BT1 292 aa8.15□□□□□ -1.1
ATG4A-203ENST00000372232 MALSU1Q96EH3 234 aa8.15□□□□□ -1.1
ATG4A-203ENST00000372232 PHYHIPLQ96FC7 376 aa8.15□□□□□ -1.1
ATG4A-203ENST00000372232 MAPKAP1Q9BPZ7 522 aa8.15□□□□□ -1.1
ATG4A-203ENST00000372232 FOXQ1Q9C009 403 aa8.15□□□□□ -1.1
ATG4A-203ENST00000372232 ZDHHC6Q9H6R6 413 aa8.15□□□□□ -1.1
ATG4A-203ENST00000372232 BEX1Q9HBH7 125 aa8.15□□□□□ -1.1
ATG4A-203ENST00000372232 SLC25A13Q9UJS0 675 aa8.15□□□□□ -1.1
ATG4A-203ENST00000372232 KIAA1671Q9BY89 1806 aa8.15□□□□□ -1.1
ATG4A-203ENST00000372232 KIAA0100Q14667 2235 aaKnown RBP8.15□□□□□ -1.1
ATG4A-203ENST00000372232 A0A1W2PRB8 838 aa8.15□□□□□ -1.1
ATG4A-203ENST00000372232 ZAR1LA6NP61 321 aa8.15□□□□□ -1.1
ATG4A-203ENST00000372232 LOC730098B7Z3J9 87 aa8.15□□□□□ -1.1
ATG4A-203ENST00000372232 SCAMP2O15127 329 aaKnown RBP8.15□□□□□ -1.1
ATG4A-203ENST00000372232 NSA2O95478 260 aaKnown RBP8.15□□□□□ -1.1
ATG4A-203ENST00000372232 SERPINA5P05154 406 aa8.15□□□□□ -1.1
ATG4A-203ENST00000372232 IDSP22304 550 aa8.15□□□□□ -1.1
ATG4A-203ENST00000372232 BDKRB2P30411 391 aa8.15□□□□□ -1.1
ATG4A-203ENST00000372232 GABRA5P31644 462 aa8.15□□□□□ -1.1
ATG4A-203ENST00000372232 MPIP34949 423 aa8.15□□□□□ -1.1
ATG4A-203ENST00000372232 CARD18P57730 90 aa8.15□□□□□ -1.1
ATG4A-203ENST00000372232 SNRPGP62308 76 aaKnown RBP8.15□□□□□ -1.1
ATG4A-203ENST00000372232 RPL38P63173 70 aaKnown RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms