RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 RAD1O60671 282 aa12.86□□□□□ -0.35
LDB3-204ENST00000372066 NDUFB2O95178 105 aa12.86□□□□□ -0.35
LDB3-204ENST00000372066 IL33O95760 270 aa12.86□□□□□ -0.35
LDB3-204ENST00000372066 TSPAN7P41732 249 aa12.86□□□□□ -0.35
LDB3-204ENST00000372066 RNF144AP50876 292 aaPredicted RBP12.86□□□□□ -0.35
LDB3-204ENST00000372066 DEFA1P59665 94 aa12.86□□□□□ -0.35
LDB3-204ENST00000372066 DEFA3P59666 94 aa12.86□□□□□ -0.35
LDB3-204ENST00000372066 ERV3-1Q14264 604 aa12.86□□□□□ -0.35
LDB3-204ENST00000372066 TRAM1Q15629 374 aa12.86□□□□□ -0.35
LDB3-204ENST00000372066 ELAVL1Q15717 326 aaKnown RBP12.86□□□□□ -0.35
LDB3-204ENST00000372066 KLHL26Q53HC5 615 aa12.86□□□□□ -0.35
LDB3-204ENST00000372066 PLBD1Q6P4A8 553 aa12.86□□□□□ -0.35
LDB3-204ENST00000372066 WDR74Q6RFH5 385 aaPredicted RBP12.86□□□□□ -0.35
LDB3-204ENST00000372066 ZNF322Q6U7Q0 402 aaPredicted RBP12.86□□□□□ -0.35
LDB3-204ENST00000372066 GPALPP1Q8IXQ4 340 aa12.86□□□□□ -0.35
LDB3-204ENST00000372066 OR4F15Q8NGB8 312 aa12.86□□□□□ -0.35
LDB3-204ENST00000372066 GATAD2BQ8WXI9 593 aa12.86□□□□□ -0.35
LDB3-204ENST00000372066 SENP5Q96HI0 755 aaPredicted RBP12.86□□□□□ -0.35
LDB3-204ENST00000372066 ZNF649Q9BS31 505 aa12.86□□□□□ -0.35
LDB3-204ENST00000372066 NDC1Q9BTX1 674 aa12.86□□□□□ -0.35
LDB3-204ENST00000372066 UBQLN4Q9NRR5 601 aa12.86□□□□□ -0.35
LDB3-204ENST00000372066 RHBDL2Q9NX52 303 aa12.86□□□□□ -0.35
LDB3-204ENST00000372066 SERTAD3Q9UJW9 196 aa12.86□□□□□ -0.35
LDB3-204ENST00000372066 TMEM184BQ9Y519 407 aaPredicted RBP12.86□□□□□ -0.35
LDB3-204ENST00000372066 SPTBP11277 2137 aa12.86□□□□□ -0.35
LDB3-204ENST00000372066 TOX3O15405 576 aaPredicted RBP12.86□□□□□ -0.35
LDB3-204ENST00000372066 CDRT1O95170 752 aa12.86□□□□□ -0.35
LDB3-204ENST00000372066 APOL3O95236 402 aa12.86□□□□□ -0.35
LDB3-204ENST00000372066 SLC2A10O95528 541 aa12.86□□□□□ -0.35
LDB3-204ENST00000372066 HNRNPCP07910 306 aaKnown RBP eCLIP12.86□□□□□ -0.35
LDB3-204ENST00000372066 PNMTP11086 282 aa12.86□□□□□ -0.35
LDB3-204ENST00000372066 CFL1P23528 166 aaKnown RBP12.86□□□□□ -0.35
LDB3-204ENST00000372066 RANBP1P43487 201 aa12.86□□□□□ -0.35
LDB3-204ENST00000372066 SLC37A1P57057 533 aa12.86□□□□□ -0.35
LDB3-204ENST00000372066 TAS2R43P59537 309 aa12.86□□□□□ -0.35
LDB3-204ENST00000372066 RPS25P62851 125 aaKnown RBP12.86□□□□□ -0.35
LDB3-204ENST00000372066 TLE1Q04724 770 aa12.86□□□□□ -0.35
LDB3-204ENST00000372066 CRYZQ08257 329 aaKnown RBP12.86□□□□□ -0.35
LDB3-204ENST00000372066 CRTC2Q53ET0 693 aaPredicted RBP12.86□□□□□ -0.35
LDB3-204ENST00000372066 FNDC7Q5VTL7 733 aa12.86□□□□□ -0.35
LDB3-204ENST00000372066 KIRREL2Q6UWL6 708 aa12.86□□□□□ -0.35
LDB3-204ENST00000372066 THSD4Q6ZMP0 1018 aa12.86□□□□□ -0.35
LDB3-204ENST00000372066 LHFPL3Q86UP9 236 aa12.86□□□□□ -0.35
LDB3-204ENST00000372066 TMEM151BQ8IW70 566 aa12.86□□□□□ -0.35
LDB3-204ENST00000372066 CADM2Q8N3J6 435 aa12.86□□□□□ -0.35
LDB3-204ENST00000372066 BBS1Q8NFJ9 593 aa12.86□□□□□ -0.35
LDB3-204ENST00000372066 OR14A16Q8NHC5 309 aa12.86□□□□□ -0.35
LDB3-204ENST00000372066 C1GALT1C1Q96EU7 318 aa12.86□□□□□ -0.35
LDB3-204ENST00000372066 TRMT61AQ96FX7 289 aaKnown RBP12.86□□□□□ -0.35
LDB3-204ENST00000372066 CTRCQ99895 268 aa12.86□□□□□ -0.35
LDB3-204ENST00000372066 C12orf10Q9HB07 376 aa12.86□□□□□ -0.35
LDB3-204ENST00000372066 SNTG1Q9NSN8 517 aa12.86□□□□□ -0.35
LDB3-204ENST00000372066 IL20RAQ9UHF4 553 aa12.86□□□□□ -0.35
LDB3-204ENST00000372066 CMAHPQ9Y471 501 aa12.86□□□□□ -0.35
LDB3-204ENST00000372066 PCDHGB6Q9Y5F9 930 aa12.86□□□□□ -0.35
LDB3-204ENST00000372066 HECTD1Q9ULT8 2610 aa12.85□□□□□ -0.35
LDB3-204ENST00000372066 ZNF891A8MT65 544 aaPredicted RBP12.85□□□□□ -0.35
LDB3-204ENST00000372066 WWP2O00308 870 aa12.85□□□□□ -0.35
LDB3-204ENST00000372066 NKX2-8O15522 239 aa12.85□□□□□ -0.35
LDB3-204ENST00000372066 IDH3BO43837 385 aa12.85□□□□□ -0.35
LDB3-204ENST00000372066 HPGDP15428 266 aa12.85□□□□□ -0.35
LDB3-204ENST00000372066 FBLP22087 321 aaKnown RBP12.85□□□□□ -0.35
LDB3-204ENST00000372066 SLC2A5P22732 501 aa12.85□□□□□ -0.35
LDB3-204ENST00000372066 GALEQ14376 348 aa12.85□□□□□ -0.35
LDB3-204ENST00000372066 LCN1P1Q5VSP4 162 aa12.85□□□□□ -0.35
LDB3-204ENST00000372066 AGAP7PQ5VUJ5 663 aa12.85□□□□□ -0.35
LDB3-204ENST00000372066 C22orf42Q6IC83 251 aa12.85□□□□□ -0.35
LDB3-204ENST00000372066 WBP2NLQ6ICG8 309 aa12.85□□□□□ -0.35
LDB3-204ENST00000372066 TTLL10Q6ZVT0 673 aa12.85□□□□□ -0.35
LDB3-204ENST00000372066 SHFQ7M4L6 423 aa12.85□□□□□ -0.35
LDB3-204ENST00000372066 NUP54Q7Z3B4 507 aa12.85□□□□□ -0.35
LDB3-204ENST00000372066 METTL27Q8N6F8 245 aaPredicted RBP12.85□□□□□ -0.35
LDB3-204ENST00000372066 SIRT6Q8N6T7 355 aa12.85□□□□□ -0.35
LDB3-204ENST00000372066 SLC37A3Q8NCC5 494 aa12.85□□□□□ -0.35
LDB3-204ENST00000372066 ATP6V1C2Q8NEY4 427 aa12.85□□□□□ -0.35
LDB3-204ENST00000372066 OR51G2Q8NGK0 314 aa12.85□□□□□ -0.35
LDB3-204ENST00000372066 SETD6Q8TBK2 473 aa12.85□□□□□ -0.35
LDB3-204ENST00000372066 PTPMT1Q8WUK0 201 aaPredicted RBP12.85□□□□□ -0.35
LDB3-204ENST00000372066 KISS1RQ969F8 398 aaPredicted RBP12.85□□□□□ -0.35
LDB3-204ENST00000372066 LCORQ96JN0 433 aaPredicted RBP12.85□□□□□ -0.35
LDB3-204ENST00000372066 KCNS3Q9BQ31 491 aa12.85□□□□□ -0.35
LDB3-204ENST00000372066 TMEM43Q9BTV4 400 aa12.85□□□□□ -0.35
LDB3-204ENST00000372066 BARHL1Q9BZE3 327 aa12.85□□□□□ -0.35
LDB3-204ENST00000372066 NDEL1Q9GZM8 345 aa12.85□□□□□ -0.35
LDB3-204ENST00000372066 MCCC2Q9HCC0 563 aa12.85□□□□□ -0.35
LDB3-204ENST00000372066 ABCB10Q9NRK6 738 aa12.85□□□□□ -0.35
LDB3-204ENST00000372066 ZNF337Q9Y3M9 751 aa12.85□□□□□ -0.35
LDB3-204ENST00000372066 HEATR5AQ86XA9 2040 aa12.84□□□□□ -0.35
LDB3-204ENST00000372066 TRAV27A0A087WT01 109 aa12.84□□□□□ -0.35
LDB3-204ENST00000372066 A0A1B0GX78 115 aa12.84□□□□□ -0.35
LDB3-204ENST00000372066 TCRBV16S1A1N1A0A5B0 115 aa12.84□□□□□ -0.35
LDB3-204ENST00000372066 DAPL1A0PJW8 107 aa12.84□□□□□ -0.35
LDB3-204ENST00000372066 CCDC182A6NF36 153 aa12.84□□□□□ -0.35
LDB3-204ENST00000372066 FAM183AA6NL82 134 aa12.84□□□□□ -0.35
LDB3-204ENST00000372066 C12orf71A8MTZ7 269 aa12.84□□□□□ -0.35
LDB3-204ENST00000372066 SCDO00767 359 aa12.84□□□□□ -0.35
LDB3-204ENST00000372066 TBX1O43435 398 aa12.84□□□□□ -0.35
LDB3-204ENST00000372066 ADAM11O75078 769 aa12.84□□□□□ -0.35
LDB3-204ENST00000372066 PPP1R3DO95685 299 aa12.84□□□□□ -0.35
LDB3-204ENST00000372066 IGKV3-11P04433 115 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms