RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 ELP4Q96EB1 424 aa20.6■□□□□ 0.89
TM9SF3-201ENST00000371142 TNFRSF13CQ96RJ3 184 aa20.6■□□□□ 0.89
TM9SF3-201ENST00000371142 SLC38A1Q9H2H9 487 aa20.6■□□□□ 0.89
TM9SF3-201ENST00000371142 ZNF286AQ9HBT8 521 aa20.6■□□□□ 0.89
TM9SF3-201ENST00000371142 A0A1W2PS29 197 aa20.6■□□□□ 0.89
TM9SF3-201ENST00000371142 CTDSP2O14595 271 aa20.6■□□□□ 0.89
TM9SF3-201ENST00000371142 LYPD4Q6UWN0 246 aa20.6■□□□□ 0.89
TM9SF3-201ENST00000371142 TCTEX1D2Q8WW35 142 aa20.6■□□□□ 0.89
TM9SF3-201ENST00000371142 ATOH1Q92858 354 aaPredicted RBP20.6■□□□□ 0.89
TM9SF3-201ENST00000371142 PRSS16Q9NQE7 514 aa20.6■□□□□ 0.89
TM9SF3-201ENST00000371142 GMPR2Q9P2T1 348 aaKnown RBP20.6■□□□□ 0.89
TM9SF3-201ENST00000371142 FZD7O75084 574 aa20.59■□□□□ 0.89
TM9SF3-201ENST00000371142 ITGB2P05107 769 aa20.59■□□□□ 0.89
TM9SF3-201ENST00000371142 GM2AP17900 193 aa20.59■□□□□ 0.89
TM9SF3-201ENST00000371142 GIPRP48546 466 aa20.59■□□□□ 0.89
TM9SF3-201ENST00000371142 MRPS21P82921 87 aaKnown RBP20.59■□□□□ 0.89
TM9SF3-201ENST00000371142 RELAQ04206 551 aa20.59■□□□□ 0.89
TM9SF3-201ENST00000371142 ZNF169Q14929 603 aaPredicted RBP20.59■□□□□ 0.89
TM9SF3-201ENST00000371142 EVA1AQ9H8M9 152 aa20.59■□□□□ 0.89
TM9SF3-201ENST00000371142 TMX2-CTNND1H3BSU7 103 aa20.59■□□□□ 0.89
TM9SF3-201ENST00000371142 ERVFC1P60507 584 aa20.59■□□□□ 0.89
TM9SF3-201ENST00000371142 NAA50Q9GZZ1 169 aaKnown RBP20.59■□□□□ 0.89
TM9SF3-201ENST00000371142 C14orf28Q4W4Y0 310 aa20.59■□□□□ 0.89
TM9SF3-201ENST00000371142 UTP4Q969X6 686 aaKnown RBP20.59■□□□□ 0.89
TM9SF3-201ENST00000371142 SLC39A13Q96H72 371 aa20.59■□□□□ 0.89
TM9SF3-201ENST00000371142 ADAM29Q9UKF5 820 aa20.59■□□□□ 0.89
TM9SF3-201ENST00000371142 NUPL2O15504 423 aaKnown RBP20.59■□□□□ 0.89
TM9SF3-201ENST00000371142 IL1AP01583 271 aa20.59■□□□□ 0.89
TM9SF3-201ENST00000371142 CHRNB1P11230 501 aa20.59■□□□□ 0.89
TM9SF3-201ENST00000371142 SORDQ00796 357 aa20.59■□□□□ 0.89
TM9SF3-201ENST00000371142 TMEM64Q6YI46 380 aa20.59■□□□□ 0.89
TM9SF3-201ENST00000371142 MS4A4AQ96JQ5 239 aa20.59■□□□□ 0.89
TM9SF3-201ENST00000371142 GALNT9Q9HCQ5 603 aa20.59■□□□□ 0.89
TM9SF3-201ENST00000371142 GPATCH2Q9NW75 528 aa20.59■□□□□ 0.89
TM9SF3-201ENST00000371142 HIF1ANQ9NWT6 349 aa20.59■□□□□ 0.89
TM9SF3-201ENST00000371142 NME7Q9Y5B8 376 aa20.59■□□□□ 0.89
TM9SF3-201ENST00000371142 OR7C1O76099 320 aaPredicted RBP20.59■□□□□ 0.89
TM9SF3-201ENST00000371142 DCAF12Q5T6F0 453 aa20.59■□□□□ 0.89
TM9SF3-201ENST00000371142 CITO14578 2027 aa20.59■□□□□ 0.89
TM9SF3-201ENST00000371142 MTCP1P56278 107 aa20.58■□□□□ 0.89
TM9SF3-201ENST00000371142 ADIPOR2Q86V24 386 aa20.58■□□□□ 0.89
TM9SF3-201ENST00000371142 OR7G1Q8NGA0 311 aa20.58■□□□□ 0.89
TM9SF3-201ENST00000371142 SGK3Q96BR1 496 aa20.58■□□□□ 0.89
TM9SF3-201ENST00000371142 SDHAF2Q9NX18 166 aa20.58■□□□□ 0.89
TM9SF3-201ENST00000371142 RPH3ALQ9UNE2 315 aa20.58■□□□□ 0.89
TM9SF3-201ENST00000371142 ZBTB42B2RXF5 422 aa20.58■□□□□ 0.89
TM9SF3-201ENST00000371142 P2RX6O15547 441 aa20.58■□□□□ 0.89
TM9SF3-201ENST00000371142 CACNG3O60359 315 aa20.58■□□□□ 0.89
TM9SF3-201ENST00000371142 PTHP01270 115 aa20.58■□□□□ 0.89
TM9SF3-201ENST00000371142 SNRNP70P08621 437 aaKnown RBP20.58■□□□□ 0.89
TM9SF3-201ENST00000371142 ZNF684Q5T5D7 378 aa20.58■□□□□ 0.89
TM9SF3-201ENST00000371142 HEPHL1Q6MZM0 1159 aa20.58■□□□□ 0.89
TM9SF3-201ENST00000371142 ZNF419Q96HQ0 510 aaPredicted RBP20.58■□□□□ 0.89
TM9SF3-201ENST00000371142 ALPLP05186 524 aa20.58■□□□□ 0.88
TM9SF3-201ENST00000371142 CLEC14AQ86T13 490 aa20.58■□□□□ 0.88
TM9SF3-201ENST00000371142 TRAPPC2LQ9UL33 140 aa20.58■□□□□ 0.88
TM9SF3-201ENST00000371142 C17orf113A0A1B0GUU1 675 aa20.58■□□□□ 0.88
TM9SF3-201ENST00000371142 POM121CA8CG34 1229 aa20.58■□□□□ 0.88
TM9SF3-201ENST00000371142 GLSO94925 669 aaPredicted RBP20.58■□□□□ 0.88
TM9SF3-201ENST00000371142 TK1P04183 234 aa20.58■□□□□ 0.88
TM9SF3-201ENST00000371142 IKZF1Q13422 519 aa20.58■□□□□ 0.88
TM9SF3-201ENST00000371142 TATDN3Q17R31 274 aa20.58■□□□□ 0.88
TM9SF3-201ENST00000371142 GGTA1PQ4G0N0 100 aa20.58■□□□□ 0.88
TM9SF3-201ENST00000371142 VRK3Q8IV63 474 aa20.58■□□□□ 0.88
TM9SF3-201ENST00000371142 MUCL1Q96DR8 90 aa20.58■□□□□ 0.88
TM9SF3-201ENST00000371142 TAS2R16Q9NYV7 291 aa20.58■□□□□ 0.88
TM9SF3-201ENST00000371142 WIF1Q9Y5W5 379 aa20.58■□□□□ 0.88
TM9SF3-201ENST00000371142 ALKAL1Q6UXT8 129 aa20.57■□□□□ 0.88
TM9SF3-201ENST00000371142 ALG12Q9BV10 488 aa20.57■□□□□ 0.88
TM9SF3-201ENST00000371142 C1orf198Q9H425 327 aa20.57■□□□□ 0.88
TM9SF3-201ENST00000371142 SERINC4A6NH21 518 aa20.57■□□□□ 0.88
TM9SF3-201ENST00000371142 TNFRSF10AO00220 468 aa20.57■□□□□ 0.88
TM9SF3-201ENST00000371142 PKDCCQ504Y2 493 aa20.57■□□□□ 0.88
TM9SF3-201ENST00000371142 C1GALT1Q9NS00 363 aa20.57■□□□□ 0.88
TM9SF3-201ENST00000371142 DHCR7Q9UBM7 475 aaKnown RBP20.57■□□□□ 0.88
TM9SF3-201ENST00000371142 NOSIPQ9Y314 301 aaKnown RBP20.57■□□□□ 0.88
TM9SF3-201ENST00000371142 ANKRD34BA5PLL1 514 aa20.57■□□□□ 0.88
TM9SF3-201ENST00000371142 A6NHS1 94 aa20.57■□□□□ 0.88
TM9SF3-201ENST00000371142 FBXO24O75426 580 aa20.57■□□□□ 0.88
TM9SF3-201ENST00000371142 RAB40ALP0C0E4 278 aa20.57■□□□□ 0.88
TM9SF3-201ENST00000371142 GABRB3P28472 473 aa20.57■□□□□ 0.88
TM9SF3-201ENST00000371142 AADACL3Q5VUY0 350 aa20.57■□□□□ 0.88
TM9SF3-201ENST00000371142 SLX4IPQ5VYV7 408 aa20.57■□□□□ 0.88
TM9SF3-201ENST00000371142 RTL10Q7L3V2 364 aa20.57■□□□□ 0.88
TM9SF3-201ENST00000371142 AAED1Q7RTV5 226 aa20.57■□□□□ 0.88
TM9SF3-201ENST00000371142 DMBX1Q8NFW5 382 aa20.57■□□□□ 0.88
TM9SF3-201ENST00000371142 OR5D18Q8NGL1 313 aa20.57■□□□□ 0.88
TM9SF3-201ENST00000371142 RAB40AQ8WXH6 277 aa20.57■□□□□ 0.88
TM9SF3-201ENST00000371142 SLC23A2Q9UGH3 650 aa20.57■□□□□ 0.88
TM9SF3-201ENST00000371142 SULT1C2O00338 296 aa20.57■□□□□ 0.88
TM9SF3-201ENST00000371142 TIMM8AO60220 97 aaPredicted RBP20.57■□□□□ 0.88
TM9SF3-201ENST00000371142 SSR4P51571 173 aa20.57■□□□□ 0.88
TM9SF3-201ENST00000371142 TAS2R46P59540 309 aa20.57■□□□□ 0.88
TM9SF3-201ENST00000371142 ZNF750Q32MQ0 723 aa20.57■□□□□ 0.88
TM9SF3-201ENST00000371142 OR13C9Q8NGT0 318 aa20.57■□□□□ 0.88
TM9SF3-201ENST00000371142 ZNF436Q9C0F3 470 aaPredicted RBP20.57■□□□□ 0.88
TM9SF3-201ENST00000371142 CDHR4A6H8M9 788 aa20.57■□□□□ 0.88
TM9SF3-201ENST00000371142 H0YIV9 168 aa20.57■□□□□ 0.88
TM9SF3-201ENST00000371142 MED6O75586 246 aa20.57■□□□□ 0.88
TM9SF3-201ENST00000371142 PTGER4P35408 488 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms