RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 CBLN3Q6UW01 205 aa0.12□□□□□ -2.39
RNU6-238P-201ENST00000363313 NAA40Q86UY6 237 aa0.12□□□□□ -2.39
RNU6-238P-201ENST00000363313 ANKRD20A12PQ8NF67 263 aa0.12□□□□□ -2.39
RNU6-238P-201ENST00000363313 FAM110BQ8TC76 370 aa0.12□□□□□ -2.39
RNU6-238P-201ENST00000363313 C17orf50Q8WW18 174 aa0.12□□□□□ -2.39
RNU6-238P-201ENST00000363313 ST8SIA1Q92185 356 aa0.12□□□□□ -2.39
RNU6-238P-201ENST00000363313 ZNF560Q96MR9 790 aa0.12□□□□□ -2.39
RNU6-238P-201ENST00000363313 ZNF649Q9BS31 505 aa0.12□□□□□ -2.39
RNU6-238P-201ENST00000363313 SHANK2-AS3Q9BTD1 123 aa0.12□□□□□ -2.39
RNU6-238P-201ENST00000363313 FTHL17Q9BXU8 183 aa0.12□□□□□ -2.39
RNU6-238P-201ENST00000363313 MRPL9Q9BYD2 267 aaKnown RBP0.12□□□□□ -2.39
RNU6-238P-201ENST00000363313 ABCG4Q9H172 646 aa0.12□□□□□ -2.39
RNU6-238P-201ENST00000363313 VCPKMTQ9H867 229 aa0.12□□□□□ -2.39
RNU6-238P-201ENST00000363313 FOLH1BQ9HBA9 442 aa0.12□□□□□ -2.39
RNU6-238P-201ENST00000363313 PARP11Q9NR21 331 aa0.12□□□□□ -2.39
RNU6-238P-201ENST00000363313 NUDT15Q9NV35 164 aa0.12□□□□□ -2.39
RNU6-238P-201ENST00000363313 MRPL39Q9NYK5 338 aaKnown RBP0.12□□□□□ -2.39
RNU6-238P-201ENST00000363313 UVRAGQ9P2Y5 699 aa0.12□□□□□ -2.39
RNU6-238P-201ENST00000363313 TNS2Q63HR2 1409 aa0.12□□□□□ -2.39
RNU6-238P-201ENST00000363313 NFASCO94856 1347 aa0.12□□□□□ -2.39
RNU6-238P-201ENST00000363313 ZNF98A6NK75 572 aa0.11□□□□□ -2.39
RNU6-238P-201ENST00000363313 SLC25A14O95258 325 aaPredicted RBP0.11□□□□□ -2.39
RNU6-238P-201ENST00000363313 ATP6V1B2P21281 511 aa0.11□□□□□ -2.39
RNU6-238P-201ENST00000363313 KRT20P35900 424 aa0.11□□□□□ -2.39
RNU6-238P-201ENST00000363313 CNN1P51911 297 aaKnown RBP0.11□□□□□ -2.39
RNU6-238P-201ENST00000363313 RAB40BQ12829 278 aa0.11□□□□□ -2.39
RNU6-238P-201ENST00000363313 ADPRMQ3LIE5 342 aa0.11□□□□□ -2.39
RNU6-238P-201ENST00000363313 IFI44LQ53G44 452 aa0.11□□□□□ -2.39
RNU6-238P-201ENST00000363313 TTC19Q6DKK2 380 aaPredicted RBP0.11□□□□□ -2.39
RNU6-238P-201ENST00000363313 C16orf62Q7Z3J2 963 aa0.11□□□□□ -2.39
RNU6-238P-201ENST00000363313 ZNF571Q7Z3V5 609 aaPredicted RBP0.11□□□□□ -2.39
RNU6-238P-201ENST00000363313 TRIM69Q86WT6 500 aa0.11□□□□□ -2.39
RNU6-238P-201ENST00000363313 TMEM159Q96B96 161 aa0.11□□□□□ -2.39
RNU6-238P-201ENST00000363313 UPRTQ96BW1 309 aa0.11□□□□□ -2.39
RNU6-238P-201ENST00000363313 ZNF317Q96PQ6 595 aaPredicted RBP0.11□□□□□ -2.39
RNU6-238P-201ENST00000363313 DUSP16Q9BY84 665 aa0.11□□□□□ -2.39
RNU6-238P-201ENST00000363313 SRMSQ9H3Y6 488 aa0.11□□□□□ -2.39
RNU6-238P-201ENST00000363313 RANBP3Q9H6Z4 567 aaPredicted RBP0.11□□□□□ -2.39
RNU6-238P-201ENST00000363313 SUDS3Q9H7L9 328 aaPredicted RBP0.11□□□□□ -2.39
RNU6-238P-201ENST00000363313 YY1AP1Q9H869 796 aa0.11□□□□□ -2.39
RNU6-238P-201ENST00000363313 IL26Q9NPH9 171 aa0.11□□□□□ -2.39
RNU6-238P-201ENST00000363313 NFKBIL1Q9UBC1 381 aaPredicted RBP0.11□□□□□ -2.39
RNU6-238P-201ENST00000363313 FAM153AQ9UHL3 310 aa0.11□□□□□ -2.39
RNU6-238P-201ENST00000363313 XPO7Q9UIA9 1087 aaKnown RBP0.11□□□□□ -2.39
RNU6-238P-201ENST00000363313 RNF6Q9Y252 685 aa0.11□□□□□ -2.39
RNU6-238P-201ENST00000363313 OARD1Q9Y530 152 aa0.11□□□□□ -2.39
RNU6-238P-201ENST00000363313 SNX5Q9Y5X3 404 aa0.11□□□□□ -2.39
RNU6-238P-201ENST00000363313 CLSPNQ9HAW4 1339 aa0.11□□□□□ -2.39
RNU6-238P-201ENST00000363313 RPAP1Q9BWH6 1393 aaPredicted RBP0.1□□□□□ -2.39
RNU6-238P-201ENST00000363313 IGKV1D-8A0A087WSZ0 117 aa0.1□□□□□ -2.39
RNU6-238P-201ENST00000363313 H3BNH8 94 aa0.1□□□□□ -2.39
RNU6-238P-201ENST00000363313 ZNF30P17039 623 aa0.1□□□□□ -2.39
RNU6-238P-201ENST00000363313 PAICSP22234 425 aaKnown RBP0.1□□□□□ -2.39
RNU6-238P-201ENST00000363313 CTNNB1P35222 781 aa0.1□□□□□ -2.39
RNU6-238P-201ENST00000363313 OSTNP61366 133 aa0.1□□□□□ -2.39
RNU6-238P-201ENST00000363313 HECTD3Q5T447 861 aa0.1□□□□□ -2.39
RNU6-238P-201ENST00000363313 C16orf54Q6UWD8 224 aa0.1□□□□□ -2.39
RNU6-238P-201ENST00000363313 FAM159AQ6UWV7 190 aa0.1□□□□□ -2.39
RNU6-238P-201ENST00000363313 HSDL2Q6YN16 418 aa0.1□□□□□ -2.39
RNU6-238P-201ENST00000363313 APTXQ7Z2E3 356 aaKnown RBP0.1□□□□□ -2.39
RNU6-238P-201ENST00000363313 LRRC43Q8N309 656 aa0.1□□□□□ -2.39
RNU6-238P-201ENST00000363313 OR9A2Q8NGT5 310 aa0.1□□□□□ -2.39
RNU6-238P-201ENST00000363313 MRPS31Q92665 395 aaKnown RBP0.1□□□□□ -2.39
RNU6-238P-201ENST00000363313 CREB3L1Q96BA8 519 aa0.1□□□□□ -2.39
RNU6-238P-201ENST00000363313 AURKBQ96GD4 344 aaPredicted RBP0.1□□□□□ -2.39
RNU6-238P-201ENST00000363313 CAMK2N2Q96S95 79 aa0.1□□□□□ -2.39
RNU6-238P-201ENST00000363313 AP1M1Q9BXS5 423 aa0.1□□□□□ -2.39
RNU6-238P-201ENST00000363313 OSBPL8Q9BZF1 889 aa0.1□□□□□ -2.39
RNU6-238P-201ENST00000363313 C12orf10Q9HB07 376 aa0.1□□□□□ -2.39
RNU6-238P-201ENST00000363313 LPAR2Q9HBW0 351 aa0.1□□□□□ -2.39
RNU6-238P-201ENST00000363313 UTP6Q9NYH9 597 aaKnown RBP0.1□□□□□ -2.39
RNU6-238P-201ENST00000363313 TRAF3IP3Q9Y228 551 aa0.1□□□□□ -2.39
RNU6-238P-201ENST00000363313 DOCK8Q8NF50 2099 aa0.1□□□□□ -2.39
RNU6-238P-201ENST00000363313 WDR62O43379 1518 aa0.09□□□□□ -2.39
RNU6-238P-201ENST00000363313 IGHV2-70DA0A0C4DH43 119 aa0.09□□□□□ -2.4
RNU6-238P-201ENST00000363313 C12orf71A8MTZ7 269 aa0.09□□□□□ -2.4
RNU6-238P-201ENST00000363313 UBXN8O00124 270 aa0.09□□□□□ -2.4
RNU6-238P-201ENST00000363313 PRKYO43930 277 aa0.09□□□□□ -2.4
RNU6-238P-201ENST00000363313 BCAS1O75363 584 aaPredicted RBP0.09□□□□□ -2.4
RNU6-238P-201ENST00000363313 OLFM2O95897 454 aa0.09□□□□□ -2.4
RNU6-238P-201ENST00000363313 IGHV3-43DP0DP04 118 aa0.09□□□□□ -2.4
RNU6-238P-201ENST00000363313 UROSP10746 265 aa0.09□□□□□ -2.4
RNU6-238P-201ENST00000363313 UQCRBP14927 111 aa0.09□□□□□ -2.4
RNU6-238P-201ENST00000363313 CYP2B6P20813 491 aa0.09□□□□□ -2.4
RNU6-238P-201ENST00000363313 DCKP27707 260 aa0.09□□□□□ -2.4
RNU6-238P-201ENST00000363313 SLC11A1P49279 550 aa0.09□□□□□ -2.4
RNU6-238P-201ENST00000363313 GDI2P50395 445 aaKnown RBP0.09□□□□□ -2.4
RNU6-238P-201ENST00000363313 PRKXP51817 358 aa0.09□□□□□ -2.4
RNU6-238P-201ENST00000363313 RBP5P82980 135 aa0.09□□□□□ -2.4
RNU6-238P-201ENST00000363313 BFSP1Q12934 665 aa0.09□□□□□ -2.4
RNU6-238P-201ENST00000363313 ERCC8Q13216 396 aa0.09□□□□□ -2.4
RNU6-238P-201ENST00000363313 CYTH1Q15438 398 aa0.09□□□□□ -2.4
RNU6-238P-201ENST00000363313 TTLL9Q3SXZ7 439 aa0.09□□□□□ -2.4
RNU6-238P-201ENST00000363313 PCOTHQ58A44 107 aa0.09□□□□□ -2.4
RNU6-238P-201ENST00000363313 VAX1Q5SQQ9 334 aa0.09□□□□□ -2.4
RNU6-238P-201ENST00000363313 PRAMEF7Q5VXH5 474 aa0.09□□□□□ -2.4
RNU6-238P-201ENST00000363313 DLEU7Q6UYE1 221 aa0.09□□□□□ -2.4
RNU6-238P-201ENST00000363313 LANCL3Q6ZV70 420 aa0.09□□□□□ -2.4
RNU6-238P-201ENST00000363313 GET4Q7L5D6 327 aaPredicted RBP0.09□□□□□ -2.4
RNU6-238P-201ENST00000363313 ANKRD37Q7Z713 158 aa0.09□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms