RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 PRPH2P23942 346 aa12.96□□□□□ -0.33
SMC5-201ENST00000361138 SOX18P35713 384 aa12.96□□□□□ -0.33
SMC5-201ENST00000361138 SQSTM1Q13501 440 aa12.96□□□□□ -0.33
SMC5-201ENST00000361138 RAB33AQ14088 237 aa12.96□□□□□ -0.33
SMC5-201ENST00000361138 SLC9A3R2Q15599 337 aa12.96□□□□□ -0.33
SMC5-201ENST00000361138 C2CD4CQ8TF44 421 aa12.96□□□□□ -0.33
SMC5-201ENST00000361138 ASB17Q8WXJ9 295 aa12.96□□□□□ -0.33
SMC5-201ENST00000361138 ELOVL3Q9HB03 270 aa12.96□□□□□ -0.33
SMC5-201ENST00000361138 PDFQ9HBH1 243 aa12.96□□□□□ -0.33
SMC5-201ENST00000361138 RNF186Q9NXI6 227 aa12.96□□□□□ -0.33
SMC5-201ENST00000361138 HMGN4O00479 90 aa12.96□□□□□ -0.33
SMC5-201ENST00000361138 FBXO24O75426 580 aa12.96□□□□□ -0.33
SMC5-201ENST00000361138 LGI1O95970 557 aa12.96□□□□□ -0.33
SMC5-201ENST00000361138 SOD1P00441 154 aa12.96□□□□□ -0.33
SMC5-201ENST00000361138 CCL5P13501 91 aa12.96□□□□□ -0.33
SMC5-201ENST00000361138 ARL6IP1Q15041 203 aa12.96□□□□□ -0.33
SMC5-201ENST00000361138 RSU1Q15404 277 aa12.96□□□□□ -0.33
SMC5-201ENST00000361138 BEND4Q6ZU67 534 aa12.96□□□□□ -0.33
SMC5-201ENST00000361138 PEX11GQ96HA9 241 aa12.96□□□□□ -0.33
SMC5-201ENST00000361138 UBQLN3Q9H347 655 aa12.96□□□□□ -0.33
SMC5-201ENST00000361138 FZD3Q9NPG1 666 aa12.96□□□□□ -0.33
SMC5-201ENST00000361138 DSCR3O14972 297 aa12.96□□□□□ -0.34
SMC5-201ENST00000361138 HTRA3P83110 453 aa12.96□□□□□ -0.34
SMC5-201ENST00000361138 BDH1Q02338 343 aa12.96□□□□□ -0.34
SMC5-201ENST00000361138 CRMP1Q14194 572 aa12.96□□□□□ -0.34
SMC5-201ENST00000361138 EXOSC7Q15024 291 aaKnown RBP12.96□□□□□ -0.34
SMC5-201ENST00000361138 PARS2Q7L3T8 475 aaKnown RBP12.96□□□□□ -0.34
SMC5-201ENST00000361138 TMEM99Q8N816 258 aa12.96□□□□□ -0.34
SMC5-201ENST00000361138 AVL9Q8NBF6 648 aa12.96□□□□□ -0.34
SMC5-201ENST00000361138 OR5K2Q8NHB8 316 aa12.96□□□□□ -0.34
SMC5-201ENST00000361138 NELFAQ9H3P2 528 aa12.96□□□□□ -0.34
SMC5-201ENST00000361138 SLC25A19Q9HC21 320 aa12.96□□□□□ -0.34
SMC5-201ENST00000361138 HRASLSQ9HDD0 168 aa12.96□□□□□ -0.34
SMC5-201ENST00000361138 SLC6A13Q9NSD5 602 aa12.96□□□□□ -0.34
SMC5-201ENST00000361138 EVA1BQ9NVM1 165 aa12.96□□□□□ -0.34
SMC5-201ENST00000361138 FLVCR2Q9UPI3 526 aa12.96□□□□□ -0.34
SMC5-201ENST00000361138 SLC7A11Q9UPY5 501 aa12.96□□□□□ -0.34
SMC5-201ENST00000361138 LAMB2P55268 1798 aa12.96□□□□□ -0.34
SMC5-201ENST00000361138 ZC3H12DA2A288 527 aaKnown RBP12.95□□□□□ -0.34
SMC5-201ENST00000361138 GPR171O14626 319 aa12.95□□□□□ -0.34
SMC5-201ENST00000361138 SLC6A12P48065 614 aa12.95□□□□□ -0.34
SMC5-201ENST00000361138 CAV2P51636 162 aa12.95□□□□□ -0.34
SMC5-201ENST00000361138 PDX1P52945 283 aa12.95□□□□□ -0.34
SMC5-201ENST00000361138 OR10A3P58181 314 aa12.95□□□□□ -0.34
SMC5-201ENST00000361138 REEP5Q00765 189 aa12.95□□□□□ -0.34
SMC5-201ENST00000361138 SLC14A1Q13336 389 aa12.95□□□□□ -0.34
SMC5-201ENST00000361138 MORN1Q5T089 497 aa12.95□□□□□ -0.34
SMC5-201ENST00000361138 ZNF836Q6ZNA1 936 aa12.95□□□□□ -0.34
SMC5-201ENST00000361138 TAS1R1Q7RTX1 841 aa12.95□□□□□ -0.34
SMC5-201ENST00000361138 OR52E1Q8NGJ3 308 aa12.95□□□□□ -0.34
SMC5-201ENST00000361138 APH1BQ8WW43 257 aa12.95□□□□□ -0.34
SMC5-201ENST00000361138 WDR92Q96MX6 357 aa12.95□□□□□ -0.34
SMC5-201ENST00000361138 C12orf57Q99622 126 aa12.95□□□□□ -0.34
SMC5-201ENST00000361138 ZNF223Q9UK11 482 aaPredicted RBP12.95□□□□□ -0.34
SMC5-201ENST00000361138 RAB19A4D1S5 217 aa12.95□□□□□ -0.34
SMC5-201ENST00000361138 ADAMTS4O75173 837 aa12.95□□□□□ -0.34
SMC5-201ENST00000361138 SLC34A2O95436 690 aa12.95□□□□□ -0.34
SMC5-201ENST00000361138 CPMP14384 443 aa12.95□□□□□ -0.34
SMC5-201ENST00000361138 AFF3P51826 1226 aaKnown RBP12.95□□□□□ -0.34
SMC5-201ENST00000361138 OLIG3Q7RTU3 272 aa12.95□□□□□ -0.34
SMC5-201ENST00000361138 LIX1LQ8IVB5 337 aa12.95□□□□□ -0.34
SMC5-201ENST00000361138 ZFYVE21Q9BQ24 234 aa12.95□□□□□ -0.34
SMC5-201ENST00000361138 TSPAN10Q9H1Z9 355 aaPredicted RBP12.95□□□□□ -0.34
SMC5-201ENST00000361138 FGF20Q9NP95 211 aaPredicted RBP12.95□□□□□ -0.34
SMC5-201ENST00000361138 A0A1B0GUH1 482 aa12.95□□□□□ -0.34
SMC5-201ENST00000361138 NME2P22392 152 aa12.95□□□□□ -0.34
SMC5-201ENST00000361138 ITGB7P26010 798 aa12.95□□□□□ -0.34
SMC5-201ENST00000361138 BCL2A1Q16548 175 aa12.95□□□□□ -0.34
SMC5-201ENST00000361138 TRMT2BQ96GJ1 504 aaKnown RBP12.95□□□□□ -0.34
SMC5-201ENST00000361138 CASD1Q96PB1 797 aa12.95□□□□□ -0.34
SMC5-201ENST00000361138 AGAP14A8MT82 685 aa12.95□□□□□ -0.34
SMC5-201ENST00000361138 CRYBB2P43320 205 aa12.95□□□□□ -0.34
SMC5-201ENST00000361138 OR5D14Q8NGL3 314 aa12.95□□□□□ -0.34
SMC5-201ENST00000361138 SLAMF9Q96A28 289 aa12.95□□□□□ -0.34
SMC5-201ENST00000361138 MALSU1Q96EH3 234 aa12.95□□□□□ -0.34
SMC5-201ENST00000361138 HHLA2Q9UM44 414 aa12.95□□□□□ -0.34
SMC5-201ENST00000361138 MOKQ9UQ07 419 aa12.95□□□□□ -0.34
SMC5-201ENST00000361138 A0A1W2PS29 197 aa12.95□□□□□ -0.34
SMC5-201ENST00000361138 M0QYG6 137 aa12.95□□□□□ -0.34
SMC5-201ENST00000361138 CALCBP10092 127 aa12.95□□□□□ -0.34
SMC5-201ENST00000361138 UBL4AP11441 157 aa12.95□□□□□ -0.34
SMC5-201ENST00000361138 HTR2CP28335 458 aa12.95□□□□□ -0.34
SMC5-201ENST00000361138 VASPP50552 380 aaPredicted RBP12.95□□□□□ -0.34
SMC5-201ENST00000361138 EPHA5P54756 1037 aa12.95□□□□□ -0.34
SMC5-201ENST00000361138 FXYD4P59646 89 aa12.95□□□□□ -0.34
SMC5-201ENST00000361138 TMEM244Q5VVB8 128 aa12.95□□□□□ -0.34
SMC5-201ENST00000361138 VASNQ6EMK4 673 aa12.95□□□□□ -0.34
SMC5-201ENST00000361138 LCN10Q6JVE6 187 aa12.95□□□□□ -0.34
SMC5-201ENST00000361138 ANKRD53Q8N9V6 530 aa12.95□□□□□ -0.34
SMC5-201ENST00000361138 HAS2Q92819 552 aa12.95□□□□□ -0.34
SMC5-201ENST00000361138 PDXPQ96GD0 296 aa12.95□□□□□ -0.34
SMC5-201ENST00000361138 DZANK1Q9NVP4 752 aa12.95□□□□□ -0.34
SMC5-201ENST00000361138 SCML1Q9UN30 329 aa12.95□□□□□ -0.34
SMC5-201ENST00000361138 PHIPQ8WWQ0 1821 aa12.94□□□□□ -0.34
SMC5-201ENST00000361138 PRKRAO75569 313 aaKnown RBP12.94□□□□□ -0.34
SMC5-201ENST00000361138 HOXB5P09067 269 aa12.94□□□□□ -0.34
SMC5-201ENST00000361138 GLO1Q04760 184 aa12.94□□□□□ -0.34
SMC5-201ENST00000361138 ALKBH1Q13686 389 aaKnown RBP12.94□□□□□ -0.34
SMC5-201ENST00000361138 EBPQ15125 230 aaKnown RBP12.94□□□□□ -0.34
SMC5-201ENST00000361138 CCSMST1Q4G0I0 132 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms