RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 FZD1Q9UP38 647 aa12.37□□□□□ -0.43
SRGAP3-201ENST00000360413 SCO1O75880 301 aa12.37□□□□□ -0.43
SRGAP3-201ENST00000360413 TBX18O95935 607 aa12.37□□□□□ -0.43
SRGAP3-201ENST00000360413 HCCSP53701 268 aa12.37□□□□□ -0.43
SRGAP3-201ENST00000360413 CTXN1P60606 82 aa12.37□□□□□ -0.43
SRGAP3-201ENST00000360413 DCAF7P61962 342 aa12.37□□□□□ -0.43
SRGAP3-201ENST00000360413 SELENOWP63302 87 aa12.37□□□□□ -0.43
SRGAP3-201ENST00000360413 ADGRF3Q8IZF5 1079 aa12.37□□□□□ -0.43
SRGAP3-201ENST00000360413 GALNT9Q9HCQ5 603 aa12.37□□□□□ -0.43
SRGAP3-201ENST00000360413 FGF18O76093 207 aa12.37□□□□□ -0.43
SRGAP3-201ENST00000360413 IGHG1P01857 330 aa12.37□□□□□ -0.43
SRGAP3-201ENST00000360413 MT-ND4LP03901 98 aa12.37□□□□□ -0.43
SRGAP3-201ENST00000360413 IGFBP1P08833 259 aaPredicted RBP12.37□□□□□ -0.43
SRGAP3-201ENST00000360413 TIMP2P16035 220 aa12.37□□□□□ -0.43
SRGAP3-201ENST00000360413 DDOSTP39656 456 aa12.37□□□□□ -0.43
SRGAP3-201ENST00000360413 HNF4GQ14541 408 aa12.37□□□□□ -0.43
SRGAP3-201ENST00000360413 TMUB2Q71RG4 321 aa12.37□□□□□ -0.43
SRGAP3-201ENST00000360413 RAB3CQ96E17 227 aa12.37□□□□□ -0.43
SRGAP3-201ENST00000360413 TMEM19Q96HH6 336 aa12.37□□□□□ -0.43
SRGAP3-201ENST00000360413 FBXL18Q96ME1 805 aa12.37□□□□□ -0.43
SRGAP3-201ENST00000360413 OR5B2Q96R09 309 aa12.37□□□□□ -0.43
SRGAP3-201ENST00000360413 CCNL2Q96S94 520 aaPredicted RBP12.37□□□□□ -0.43
SRGAP3-201ENST00000360413 DECR2Q9NUI1 292 aa12.37□□□□□ -0.43
SRGAP3-201ENST00000360413 WIF1Q9Y5W5 379 aa12.37□□□□□ -0.43
SRGAP3-201ENST00000360413 HS3ST4Q9Y661 456 aa12.37□□□□□ -0.43
SRGAP3-201ENST00000360413 LOC102724200A0A096LPH7 203 aaPredicted RBP12.37□□□□□ -0.43
SRGAP3-201ENST00000360413 NRP1O14786 923 aa12.37□□□□□ -0.43
SRGAP3-201ENST00000360413 DRD1P21728 446 aa12.37□□□□□ -0.43
SRGAP3-201ENST00000360413 RACK1P63244 317 aaKnown RBP12.37□□□□□ -0.43
SRGAP3-201ENST00000360413 TESK1Q15569 626 aa12.37□□□□□ -0.43
SRGAP3-201ENST00000360413 CDONQ4KMG0 1287 aa12.37□□□□□ -0.43
SRGAP3-201ENST00000360413 SERINC2Q96SA4 455 aa12.37□□□□□ -0.43
SRGAP3-201ENST00000360413 MCOLN1Q9GZU1 580 aa12.37□□□□□ -0.43
SRGAP3-201ENST00000360413 GKN1Q9NS71 199 aa12.37□□□□□ -0.43
SRGAP3-201ENST00000360413 ACSS1Q9NUB1 689 aaPredicted RBP12.37□□□□□ -0.43
SRGAP3-201ENST00000360413 ARL2-SNX15V9GYD0 113 aa12.37□□□□□ -0.43
SRGAP3-201ENST00000360413 YKT6O15498 198 aa12.37□□□□□ -0.43
SRGAP3-201ENST00000360413 SMPD1P17405 629 aa12.37□□□□□ -0.43
SRGAP3-201ENST00000360413 GABRA5P31644 462 aa12.37□□□□□ -0.43
SRGAP3-201ENST00000360413 IL2RGP31785 369 aa12.37□□□□□ -0.43
SRGAP3-201ENST00000360413 SQSTM1Q13501 440 aa12.37□□□□□ -0.43
SRGAP3-201ENST00000360413 NADSYN1Q6IA69 706 aa12.37□□□□□ -0.43
SRGAP3-201ENST00000360413 KLHDC8BQ8IXV7 354 aa12.37□□□□□ -0.43
SRGAP3-201ENST00000360413 SIGLECL1Q8N7X8 197 aa12.37□□□□□ -0.43
SRGAP3-201ENST00000360413 BPIFA2Q96DR5 249 aa12.37□□□□□ -0.43
SRGAP3-201ENST00000360413 NKX6-3A6NJ46 265 aa12.37□□□□□ -0.43
SRGAP3-201ENST00000360413 SLC43A1O75387 559 aa12.37□□□□□ -0.43
SRGAP3-201ENST00000360413 TBCEQ15813 527 aaPredicted RBP12.37□□□□□ -0.43
SRGAP3-201ENST00000360413 ZNF516Q92618 1163 aa12.37□□□□□ -0.43
SRGAP3-201ENST00000360413 REEP6Q96HR9 211 aa12.37□□□□□ -0.43
SRGAP3-201ENST00000360413 SULT2B1O00204 365 aa12.37□□□□□ -0.43
SRGAP3-201ENST00000360413 NSA2O95478 260 aaKnown RBP12.37□□□□□ -0.43
SRGAP3-201ENST00000360413 DPH1Q9BZG8 443 aa12.37□□□□□ -0.43
SRGAP3-201ENST00000360413 EGLN1Q9GZT9 426 aa12.37□□□□□ -0.43
SRGAP3-201ENST00000360413 DCAF13Q9NV06 445 aaKnown RBP12.37□□□□□ -0.43
SRGAP3-201ENST00000360413 CXXC1Q9P0U4 656 aaPredicted RBP12.37□□□□□ -0.43
SRGAP3-201ENST00000360413 NUP98P52948 1817 aa12.36□□□□□ -0.43
SRGAP3-201ENST00000360413 MAKP20794 623 aa12.36□□□□□ -0.43
SRGAP3-201ENST00000360413 SH3BP2P78314 561 aa12.36□□□□□ -0.43
SRGAP3-201ENST00000360413 LTB4RQ15722 352 aa12.36□□□□□ -0.43
SRGAP3-201ENST00000360413 SLC10A6Q3KNW5 377 aa12.36□□□□□ -0.43
SRGAP3-201ENST00000360413 NLRC3Q7RTR2 1065 aa12.36□□□□□ -0.43
SRGAP3-201ENST00000360413 CLECL1Q8IZS7 167 aa12.36□□□□□ -0.43
SRGAP3-201ENST00000360413 CIDEAO60543 219 aa12.36□□□□□ -0.43
SRGAP3-201ENST00000360413 WNT11O96014 354 aa12.36□□□□□ -0.43
SRGAP3-201ENST00000360413 PSMB10P40306 273 aa12.36□□□□□ -0.43
SRGAP3-201ENST00000360413 NNATQ16517 81 aa12.36□□□□□ -0.43
SRGAP3-201ENST00000360413 SIDT1Q9NXL6 827 aaKnown RBP12.36□□□□□ -0.43
SRGAP3-201ENST00000360413 F10P00742 488 aa12.36□□□□□ -0.43
SRGAP3-201ENST00000360413 CT45A10P0DMU9 189 aa12.36□□□□□ -0.43
SRGAP3-201ENST00000360413 TBPL1P62380 186 aa12.36□□□□□ -0.43
SRGAP3-201ENST00000360413 COL13A1Q5TAT6 717 aaPredicted RBP12.36□□□□□ -0.43
SRGAP3-201ENST00000360413 PLCXD3Q63HM9 321 aa12.36□□□□□ -0.43
SRGAP3-201ENST00000360413 FAM160A2Q8N612 972 aaPredicted RBP12.36□□□□□ -0.43
SRGAP3-201ENST00000360413 CDRT4Q8N9R6 151 aa12.36□□□□□ -0.43
SRGAP3-201ENST00000360413 CYB561A3Q8NBI2 242 aa12.36□□□□□ -0.43
SRGAP3-201ENST00000360413 CACNA1DQ01668 2161 aa12.36□□□□□ -0.43
SRGAP3-201ENST00000360413 PSMB1P20618 241 aaKnown RBP12.36□□□□□ -0.43
SRGAP3-201ENST00000360413 FCN2Q15485 313 aa12.36□□□□□ -0.43
SRGAP3-201ENST00000360413 ZNF239Q16600 458 aaKnown RBP12.36□□□□□ -0.43
SRGAP3-201ENST00000360413 ADGRG3Q86Y34 549 aa12.36□□□□□ -0.43
SRGAP3-201ENST00000360413 SLC35F3Q8IY50 421 aa12.36□□□□□ -0.43
SRGAP3-201ENST00000360413 FKRPQ9H9S5 495 aa12.36□□□□□ -0.43
SRGAP3-201ENST00000360413 ZNF337Q9Y3M9 751 aa12.36□□□□□ -0.43
SRGAP3-201ENST00000360413 A0A0U1RQF3 1178 aa12.36□□□□□ -0.43
SRGAP3-201ENST00000360413 XRCC3O43542 346 aa12.36□□□□□ -0.43
SRGAP3-201ENST00000360413 NME1P15531 152 aaKnown RBP12.36□□□□□ -0.43
SRGAP3-201ENST00000360413 PCGF2P35227 344 aa12.36□□□□□ -0.43
SRGAP3-201ENST00000360413 CDKN2DP55273 166 aa12.36□□□□□ -0.43
SRGAP3-201ENST00000360413 ZNF266Q14584 549 aa12.36□□□□□ -0.43
SRGAP3-201ENST00000360413 FCRLAQ7L513 359 aa12.36□□□□□ -0.43
SRGAP3-201ENST00000360413 MISPQ8IVT2 679 aa12.36□□□□□ -0.43
SRGAP3-201ENST00000360413 TIMD4Q96H15 378 aa12.36□□□□□ -0.43
SRGAP3-201ENST00000360413 ZNF251Q9BRH9 671 aa12.36□□□□□ -0.43
SRGAP3-201ENST00000360413 KCNK6Q9Y257 313 aa12.36□□□□□ -0.43
SRGAP3-201ENST00000360413 POMT1Q9Y6A1 747 aa12.36□□□□□ -0.43
SRGAP3-201ENST00000360413 SCN9AQ15858 1988 aa12.36□□□□□ -0.43
SRGAP3-201ENST00000360413 T-ENOLP0DO92 83 aa12.36□□□□□ -0.43
SRGAP3-201ENST00000360413 RFC3P40938 356 aa12.36□□□□□ -0.43
SRGAP3-201ENST00000360413 HNRNPA3P51991 378 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms