RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 CASP3P42574 277 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 P2RY14Q15391 338 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 CATSPERDQ86XM0 798 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 CD200R1Q8TD46 325 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 LHX6Q9UPM6 363 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 A0A0D9SEW6 157 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 A0A1W2PPH5 198 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 SCO1O75880 301 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 PIP5KL1Q5T9C9 394 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 DTWD1Q8N5C7 304 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 CLEC1AQ8NC01 280 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 SLC41A2Q96JW4 573 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 INIPQ9NRY2 104 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 SLC16A6O15403 523 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 GLB1P16278 677 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 RNF212Q495C1 297 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 UNC50Q53HI1 259 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 CLDN22Q8N7P3 220 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 SLC35G3Q8N808 338 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 SAT2Q96F10 170 aaPredicted RBP8.7□□□□□ -1.02
VPS13A-203ENST00000360280 PEX11GQ96HA9 241 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 RAB18Q9NP72 206 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 OBP2BQ9NPH6 170 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 USP36Q9P275 1121 aaKnown RBP8.7□□□□□ -1.02
VPS13A-203ENST00000360280 OSGIN1Q9UJX0 560 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 SSUH2Q9Y2M2 353 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 DNAJC15Q9Y5T4 150 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 NME4O00746 187 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 ZNF207O43670 478 aaKnown RBP8.7□□□□□ -1.02
VPS13A-203ENST00000360280 GPRIN2O60269 458 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 HOXA11P31270 313 aaPredicted RBP8.7□□□□□ -1.02
VPS13A-203ENST00000360280 ZNF239Q16600 458 aaKnown RBP8.7□□□□□ -1.02
VPS13A-203ENST00000360280 SDR9C7Q8NEX9 313 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 OR13C9Q8NGT0 318 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 DMAC2Q9NW81 257 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 ELNP15502 786 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 GABRA4P48169 554 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 EPHA4P54764 986 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 LCN6P62502 163 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 OR8J2Q8NGG1 315 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 ZNF355PQ9NSJ1 428 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 TERTO14746 1132 aaKnown RBP8.7□□□□□ -1.02
VPS13A-203ENST00000360280 FDXRP22570 491 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 GPR18Q14330 331 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 SGPP1Q9BX95 441 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 NGBQ9NPG2 151 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 FBXO45P0C2W1 286 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 RAB13P51153 203 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 DGKZQ13574 1117 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 WBP2NLQ6ICG8 309 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 NDUFAF7Q7L592 441 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 CYB561A3Q8NBI2 242 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 BORCS6Q96GS4 357 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 NCBP2LA6PVI3 153 aaKnown RBP8.7□□□□□ -1.02
VPS13A-203ENST00000360280 F3P13726 295 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 WDR5P61964 334 aaKnown RBP8.7□□□□□ -1.02
VPS13A-203ENST00000360280 RAB33AQ14088 237 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 CLINT1Q14677 625 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 MDGA2Q7Z553 956 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 ZNF597Q96LX8 424 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 JTBO76095 146 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 GABRB3P28472 473 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 SHC2P98077 582 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 SLC46A3Q7Z3Q1 461 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 TMEM217Q8N7C4 229 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 LYRM2Q9NU23 88 aaPredicted RBP8.7□□□□□ -1.02
VPS13A-203ENST00000360280 IL37Q9NZH6 218 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 MYO5AQ9Y4I1 1855 aaKnown RBP8.7□□□□□ -1.02
VPS13A-203ENST00000360280 SQSTM1Q13501 440 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 Q6ZRG5 221 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 SOX7Q9BT81 388 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 VAMP8Q9BV40 100 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 NECAP2Q9NVZ3 263 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 MTCH1Q9NZJ7 389 aa8.7□□□□□ -1.02
VPS13A-203ENST00000360280 ENDOGQ14249 297 aaKnown RBP8.69□□□□□ -1.02
VPS13A-203ENST00000360280 ZNF620Q6ZNG0 422 aa8.69□□□□□ -1.02
VPS13A-203ENST00000360280 ABHD6Q9BV23 337 aa8.69□□□□□ -1.02
VPS13A-203ENST00000360280 BTNL2Q9UIR0 455 aa8.69□□□□□ -1.02
VPS13A-203ENST00000360280 GABRA2P47869 451 aa8.69□□□□□ -1.02
VPS13A-203ENST00000360280 CLECL1Q8IZS7 167 aa8.69□□□□□ -1.02
VPS13A-203ENST00000360280 METTL9Q9H1A3 318 aa8.69□□□□□ -1.02
VPS13A-203ENST00000360280 PELI2Q9HAT8 420 aa8.69□□□□□ -1.02
VPS13A-203ENST00000360280 LIN7CQ9NUP9 197 aaKnown RBP8.69□□□□□ -1.02
VPS13A-203ENST00000360280 GATMP50440 423 aa8.69□□□□□ -1.02
VPS13A-203ENST00000360280 GPLD1P80108 840 aa8.69□□□□□ -1.02
VPS13A-203ENST00000360280 EMX1Q04741 257 aaPredicted RBP8.69□□□□□ -1.02
VPS13A-203ENST00000360280 NRARPQ7Z6K4 114 aa8.69□□□□□ -1.02
VPS13A-203ENST00000360280 OR7D2Q96RA2 312 aa8.69□□□□□ -1.02
VPS13A-203ENST00000360280 SCPEP1Q9HB40 452 aa8.69□□□□□ -1.02
VPS13A-203ENST00000360280 FBXL2Q9UKC9 423 aa8.69□□□□□ -1.02
VPS13A-203ENST00000360280 SUB1P53999 127 aaKnown RBP eCLIP8.69□□□□□ -1.02
VPS13A-203ENST00000360280 SLC7A9P82251 487 aa8.69□□□□□ -1.02
VPS13A-203ENST00000360280 DOC2AQ14183 400 aa8.69□□□□□ -1.02
VPS13A-203ENST00000360280 COL13A1Q5TAT6 717 aaPredicted RBP8.69□□□□□ -1.02
VPS13A-203ENST00000360280 SFT2D1Q8WV19 159 aa8.69□□□□□ -1.02
VPS13A-203ENST00000360280 STAG3L2P0CL84 134 aa8.69□□□□□ -1.02
VPS13A-203ENST00000360280 OR7A5Q15622 319 aa8.69□□□□□ -1.02
VPS13A-203ENST00000360280 BCL7AQ4VC05 210 aa8.69□□□□□ -1.02
VPS13A-203ENST00000360280 TMEM200CA6NKL6 621 aa8.69□□□□□ -1.02
VPS13A-203ENST00000360280 ACKR3P25106 362 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms