RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 PTP4A1Q93096 173 aa13.09□□□□□ -0.31
NIPAL3-203ENST00000358028 TGM7Q96PF1 710 aa13.09□□□□□ -0.31
NIPAL3-203ENST00000358028 TNFRSF13CQ96RJ3 184 aa13.09□□□□□ -0.31
NIPAL3-203ENST00000358028 TEAD3Q99594 435 aa13.09□□□□□ -0.31
NIPAL3-203ENST00000358028 KCNJ15Q99712 375 aa13.09□□□□□ -0.31
NIPAL3-203ENST00000358028 TIMP4Q99727 224 aa13.09□□□□□ -0.31
NIPAL3-203ENST00000358028 OR10A5Q9H207 317 aa13.09□□□□□ -0.31
NIPAL3-203ENST00000358028 ISG20L2Q9H9L3 353 aaKnown RBP13.09□□□□□ -0.31
NIPAL3-203ENST00000358028 TMEM165Q9HC07 324 aa13.09□□□□□ -0.31
NIPAL3-203ENST00000358028 MCCC2Q9HCC0 563 aa13.09□□□□□ -0.31
NIPAL3-203ENST00000358028 UNC13CQ8NB66 2214 aa13.08□□□□□ -0.32
NIPAL3-203ENST00000358028 SHISA3A0PJX4 238 aa13.08□□□□□ -0.32
NIPAL3-203ENST00000358028 OR2W5A6NFC9 320 aa13.08□□□□□ -0.32
NIPAL3-203ENST00000358028 TLCD2A6NGC4 264 aa13.08□□□□□ -0.32
NIPAL3-203ENST00000358028 DKK1O94907 266 aa13.08□□□□□ -0.32
NIPAL3-203ENST00000358028 CT45A8P0DMV1 189 aa13.08□□□□□ -0.32
NIPAL3-203ENST00000358028 CT45A9P0DMV2 189 aa13.08□□□□□ -0.32
NIPAL3-203ENST00000358028 PEPDP12955 493 aa13.08□□□□□ -0.32
NIPAL3-203ENST00000358028 RPS7P62081 194 aaKnown RBP13.08□□□□□ -0.32
NIPAL3-203ENST00000358028 CRYZQ08257 329 aaKnown RBP13.08□□□□□ -0.32
NIPAL3-203ENST00000358028 NR0B2Q15466 257 aa13.08□□□□□ -0.32
NIPAL3-203ENST00000358028 NNATQ16517 81 aa13.08□□□□□ -0.32
NIPAL3-203ENST00000358028 CT45A2Q5DJT8 189 aa13.08□□□□□ -0.32
NIPAL3-203ENST00000358028 TCTE1Q5JU00 501 aa13.08□□□□□ -0.32
NIPAL3-203ENST00000358028 TIGD3Q6B0B8 471 aa13.08□□□□□ -0.32
NIPAL3-203ENST00000358028 ULK3Q6PHR2 472 aa13.08□□□□□ -0.32
NIPAL3-203ENST00000358028 KIRREL2Q6UWL6 708 aa13.08□□□□□ -0.32
NIPAL3-203ENST00000358028 RTL4Q6ZR62 310 aa13.08□□□□□ -0.32
NIPAL3-203ENST00000358028 OAFQ86UD1 273 aa13.08□□□□□ -0.32
NIPAL3-203ENST00000358028 LRRC28Q86X40 367 aaPredicted RBP13.08□□□□□ -0.32
NIPAL3-203ENST00000358028 BCORP1Q8N888 145 aa13.08□□□□□ -0.32
NIPAL3-203ENST00000358028 TEX19Q8NA77 164 aa13.08□□□□□ -0.32
NIPAL3-203ENST00000358028 OR51Q1Q8NH59 317 aa13.08□□□□□ -0.32
NIPAL3-203ENST00000358028 SENP5Q96HI0 755 aaPredicted RBP13.08□□□□□ -0.32
NIPAL3-203ENST00000358028 TBX5Q99593 518 aa13.08□□□□□ -0.32
NIPAL3-203ENST00000358028 PELOQ9BRX2 385 aaKnown RBP13.08□□□□□ -0.32
NIPAL3-203ENST00000358028 TTYH2Q9BSA4 534 aa13.08□□□□□ -0.32
NIPAL3-203ENST00000358028 SPRTNQ9H040 489 aaPredicted RBP13.08□□□□□ -0.32
NIPAL3-203ENST00000358028 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.08□□□□□ -0.32
NIPAL3-203ENST00000358028 PDE7BQ9NP56 450 aa13.08□□□□□ -0.32
NIPAL3-203ENST00000358028 LRIT1Q9P2V4 623 aa13.08□□□□□ -0.32
NIPAL3-203ENST00000358028 KLHL21Q9UJP4 597 aa13.08□□□□□ -0.32
NIPAL3-203ENST00000358028 RBMX2Q9Y388 322 aaKnown RBP13.08□□□□□ -0.32
NIPAL3-203ENST00000358028 OR10H1Q9Y4A9 318 aa13.08□□□□□ -0.32
NIPAL3-203ENST00000358028 IGF2RP11717 2491 aa13.08□□□□□ -0.32
NIPAL3-203ENST00000358028 IGHV5-51A0A0C4DH38 117 aa13.07□□□□□ -0.32
NIPAL3-203ENST00000358028 C2orf92A0A1B0GVN3 265 aa13.07□□□□□ -0.32
NIPAL3-203ENST00000358028 CPED1A4D0V7 1026 aa13.07□□□□□ -0.32
NIPAL3-203ENST00000358028 SERINC4A6NH21 518 aa13.07□□□□□ -0.32
NIPAL3-203ENST00000358028 EFCAB7A8K855 629 aa13.07□□□□□ -0.32
NIPAL3-203ENST00000358028 FAM47E-STBD1D6RA91 191 aa13.07□□□□□ -0.32
NIPAL3-203ENST00000358028 LYRM1O43325 122 aa13.07□□□□□ -0.32
NIPAL3-203ENST00000358028 NCR1O76036 304 aa13.07□□□□□ -0.32
NIPAL3-203ENST00000358028 CLPSP04118 112 aa13.07□□□□□ -0.32
NIPAL3-203ENST00000358028 IFNA16P05015 189 aa13.07□□□□□ -0.32
NIPAL3-203ENST00000358028 SBK2P0C263 348 aa13.07□□□□□ -0.32
NIPAL3-203ENST00000358028 NOS3P29474 1203 aa13.07□□□□□ -0.32
NIPAL3-203ENST00000358028 GALNSP34059 522 aa13.07□□□□□ -0.32
NIPAL3-203ENST00000358028 INPP1P49441 399 aa13.07□□□□□ -0.32
NIPAL3-203ENST00000358028 CLDN6P56747 220 aa13.07□□□□□ -0.32
NIPAL3-203ENST00000358028 MRPS15P82914 257 aaKnown RBP13.07□□□□□ -0.32
NIPAL3-203ENST00000358028 FHL1Q13642 323 aa13.07□□□□□ -0.32
NIPAL3-203ENST00000358028 CRMP1Q14194 572 aa13.07□□□□□ -0.32
NIPAL3-203ENST00000358028 ZNF362Q5T0B9 420 aaPredicted RBP13.07□□□□□ -0.32
NIPAL3-203ENST00000358028 HACD4Q5VWC8 232 aa13.07□□□□□ -0.32
NIPAL3-203ENST00000358028 OGFOD3Q6PK18 319 aa13.07□□□□□ -0.32
NIPAL3-203ENST00000358028 TRILQ7L0X0 811 aa13.07□□□□□ -0.32
NIPAL3-203ENST00000358028 ZNF615Q8N8J6 731 aa13.07□□□□□ -0.32
NIPAL3-203ENST00000358028 OR10H4Q8NGA5 316 aa13.07□□□□□ -0.32
NIPAL3-203ENST00000358028 OR5M3Q8NGP4 307 aa13.07□□□□□ -0.32
NIPAL3-203ENST00000358028 IFI44Q8TCB0 444 aa13.07□□□□□ -0.32
NIPAL3-203ENST00000358028 TRAF4Q9BUZ4 470 aaPredicted RBP13.07□□□□□ -0.32
NIPAL3-203ENST00000358028 OR51V1Q9H2C8 321 aa13.07□□□□□ -0.32
NIPAL3-203ENST00000358028 CYSLTR2Q9NS75 346 aa13.07□□□□□ -0.32
NIPAL3-203ENST00000358028 TMEM184BQ9Y519 407 aaPredicted RBP13.07□□□□□ -0.32
NIPAL3-203ENST00000358028 DMXL2Q8TDJ6 3036 aa13.07□□□□□ -0.32
NIPAL3-203ENST00000358028 FITM1A5D6W6 292 aa13.07□□□□□ -0.32
NIPAL3-203ENST00000358028 FAM25AB3EWG3 89 aa13.07□□□□□ -0.32
NIPAL3-203ENST00000358028 FAM25CB3EWG5 89 aa13.07□□□□□ -0.32
NIPAL3-203ENST00000358028 FAM25GB3EWG6 89 aa13.07□□□□□ -0.32
NIPAL3-203ENST00000358028 H0YIG0 161 aa13.07□□□□□ -0.32
NIPAL3-203ENST00000358028 SLC43A1O75387 559 aa13.07□□□□□ -0.32
NIPAL3-203ENST00000358028 REM1O75628 298 aa13.07□□□□□ -0.32
NIPAL3-203ENST00000358028 CSTAP01040 98 aa13.07□□□□□ -0.32
NIPAL3-203ENST00000358028 YES1P07947 543 aa13.07□□□□□ -0.32
NIPAL3-203ENST00000358028 FAM157BP0CG42 384 aa13.07□□□□□ -0.32
NIPAL3-203ENST00000358028 TALDO1P37837 337 aa13.07□□□□□ -0.32
NIPAL3-203ENST00000358028 GPR143P51810 404 aa13.07□□□□□ -0.32
NIPAL3-203ENST00000358028 SLC16A1P53985 500 aa13.07□□□□□ -0.32
NIPAL3-203ENST00000358028 CLDN20P56880 219 aa13.07□□□□□ -0.32
NIPAL3-203ENST00000358028 SERTAD2Q14140 314 aa13.07□□□□□ -0.32
NIPAL3-203ENST00000358028 CDK10Q15131 360 aa13.07□□□□□ -0.32
NIPAL3-203ENST00000358028 P2RY14Q15391 338 aa13.07□□□□□ -0.32
NIPAL3-203ENST00000358028 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.07□□□□□ -0.32
NIPAL3-203ENST00000358028 NDUFAF6Q330K2 333 aa13.07□□□□□ -0.32
NIPAL3-203ENST00000358028 C14orf28Q4W4Y0 310 aa13.07□□□□□ -0.32
NIPAL3-203ENST00000358028 DHRS13Q6UX07 377 aa13.07□□□□□ -0.32
NIPAL3-203ENST00000358028 PAMR1Q6UXH9 720 aa13.07□□□□□ -0.32
NIPAL3-203ENST00000358028 LIX1LQ8IVB5 337 aa13.07□□□□□ -0.32
NIPAL3-203ENST00000358028 TCTE3Q8IZS6 198 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms