RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 SULT2B1O00204 365 aa22.75■■□□□ 1.23
SSBP3-202ENST00000357475 KLF4O43474 513 aa22.75■■□□□ 1.23
SSBP3-202ENST00000357475 FKBP2P26885 142 aaKnown RBP22.75■■□□□ 1.23
SSBP3-202ENST00000357475 RIPK1Q13546 671 aa22.75■■□□□ 1.23
SSBP3-202ENST00000357475 LPCAT4Q643R3 524 aa22.75■■□□□ 1.23
SSBP3-202ENST00000357475 STK32CQ86UX6 486 aa22.75■■□□□ 1.23
SSBP3-202ENST00000357475 MEIOBQ8N635 442 aa22.75■■□□□ 1.23
SSBP3-202ENST00000357475 MFSD8Q8NHS3 518 aa22.75■■□□□ 1.23
SSBP3-202ENST00000357475 GTPBP3Q969Y2 492 aaKnown RBP22.75■■□□□ 1.23
SSBP3-202ENST00000357475 KLHL4Q9C0H6 718 aa22.75■■□□□ 1.23
SSBP3-202ENST00000357475 SMURF2Q9HAU4 748 aa22.75■■□□□ 1.23
SSBP3-202ENST00000357475 OR7A10O76100 309 aa22.74■■□□□ 1.23
SSBP3-202ENST00000357475 PMS2P2O95744 297 aa22.74■■□□□ 1.23
SSBP3-202ENST00000357475 GRPRP30550 384 aa22.74■■□□□ 1.23
SSBP3-202ENST00000357475 CARD18P57730 90 aa22.74■■□□□ 1.23
SSBP3-202ENST00000357475 C1orf94Q6P1W5 598 aa22.74■■□□□ 1.23
SSBP3-202ENST00000357475 C5orf46Q6UWT4 87 aa22.74■■□□□ 1.23
SSBP3-202ENST00000357475 OR13C2Q8NGS9 318 aa22.74■■□□□ 1.23
SSBP3-202ENST00000357475 NRBF2Q96F24 287 aa22.74■■□□□ 1.23
SSBP3-202ENST00000357475 UCN2Q96RP3 112 aa22.74■■□□□ 1.23
SSBP3-202ENST00000357475 ALKBH4Q9NXW9 302 aa22.74■■□□□ 1.23
SSBP3-202ENST00000357475 RAMP1O60894 148 aa22.73■■□□□ 1.23
SSBP3-202ENST00000357475 AKR7A3O95154 331 aa22.73■■□□□ 1.23
SSBP3-202ENST00000357475 FHL1Q13642 323 aa22.73■■□□□ 1.23
SSBP3-202ENST00000357475 GK3PQ14409 553 aa22.73■■□□□ 1.23
SSBP3-202ENST00000357475 FBXW10Q5XX13 1052 aa22.73■■□□□ 1.23
SSBP3-202ENST00000357475 TMPRSS11FQ6ZWK6 438 aa22.73■■□□□ 1.23
SSBP3-202ENST00000357475 ZDHHC13Q8IUH4 622 aa22.73■■□□□ 1.23
SSBP3-202ENST00000357475 PSD2Q9BQI7 771 aa22.73■■□□□ 1.23
SSBP3-202ENST00000357475 TRAPPC4Q9Y296 219 aa22.73■■□□□ 1.23
SSBP3-202ENST00000357475 EFCAB9A8MZ26 197 aa22.72■■□□□ 1.23
SSBP3-202ENST00000357475 M0R082 166 aa22.72■■□□□ 1.23
SSBP3-202ENST00000357475 TPOP07202 933 aa22.72■■□□□ 1.23
SSBP3-202ENST00000357475 ASAH2BP0C7U1 165 aa22.72■■□□□ 1.23
SSBP3-202ENST00000357475 ENPP1P22413 925 aa22.72■■□□□ 1.23
SSBP3-202ENST00000357475 PEX2P28328 305 aa22.72■■□□□ 1.23
SSBP3-202ENST00000357475 DAPP51397 102 aa22.72■■□□□ 1.23
SSBP3-202ENST00000357475 SLC34A1Q06495 639 aa22.72■■□□□ 1.23
SSBP3-202ENST00000357475 TRIP10Q15642 601 aa22.72■■□□□ 1.23
SSBP3-202ENST00000357475 LRRC36Q1X8D7 754 aa22.72■■□□□ 1.23
SSBP3-202ENST00000357475 WLSQ5T9L3 541 aa22.72■■□□□ 1.23
SSBP3-202ENST00000357475 ZNF585AQ6P3V2 769 aa22.72■■□□□ 1.23
SSBP3-202ENST00000357475 CD163Q86VB7 1156 aa22.72■■□□□ 1.23
SSBP3-202ENST00000357475 HIPK1Q86Z02 1210 aa22.72■■□□□ 1.23
SSBP3-202ENST00000357475 SVOPLQ8N434 492 aa22.72■■□□□ 1.23
SSBP3-202ENST00000357475 ZNF843Q8N446 348 aa22.72■■□□□ 1.23
SSBP3-202ENST00000357475 TMEM99Q8N816 258 aa22.72■■□□□ 1.23
SSBP3-202ENST00000357475 ZNF417Q8TAU3 575 aa22.72■■□□□ 1.23
SSBP3-202ENST00000357475 ROBO4Q8WZ75 1007 aa22.72■■□□□ 1.23
SSBP3-202ENST00000357475 ZNF587Q96SQ5 575 aaPredicted RBP22.72■■□□□ 1.23
SSBP3-202ENST00000357475 SLC29A1Q99808 456 aa22.72■■□□□ 1.23
SSBP3-202ENST00000357475 TAPBPLQ9BX59 468 aa22.72■■□□□ 1.23
SSBP3-202ENST00000357475 GABARAPL1Q9H0R8 117 aa22.72■■□□□ 1.23
SSBP3-202ENST00000357475 NANSQ9NR45 359 aa22.72■■□□□ 1.23
SSBP3-202ENST00000357475 CHD6Q8TD26 2715 aa22.72■■□□□ 1.23
SSBP3-202ENST00000357475 TRAV27A0A087WT01 109 aa22.72■■□□□ 1.23
SSBP3-202ENST00000357475 ARRDC5A6NEK1 342 aa22.72■■□□□ 1.23
SSBP3-202ENST00000357475 SOCS2O14508 198 aa22.72■■□□□ 1.23
SSBP3-202ENST00000357475 BCKDKO14874 412 aa22.72■■□□□ 1.23
SSBP3-202ENST00000357475 SMAD9O15198 467 aaKnown RBP22.72■■□□□ 1.23
SSBP3-202ENST00000357475 OR2T1O43869 369 aa22.72■■□□□ 1.23
SSBP3-202ENST00000357475 FZD7O75084 574 aa22.72■■□□□ 1.23
SSBP3-202ENST00000357475 IGF2P01344 180 aa22.72■■□□□ 1.23
SSBP3-202ENST00000357475 SAGP10523 405 aaPredicted RBP22.72■■□□□ 1.23
SSBP3-202ENST00000357475 ABOP16442 354 aa22.72■■□□□ 1.23
SSBP3-202ENST00000357475 ZNF26P17031 533 aaPredicted RBP22.72■■□□□ 1.23
SSBP3-202ENST00000357475 GSSP48637 474 aa22.72■■□□□ 1.23
SSBP3-202ENST00000357475 ARHGDIAP52565 204 aa22.72■■□□□ 1.23
SSBP3-202ENST00000357475 SGCBQ16585 318 aa22.72■■□□□ 1.23
SSBP3-202ENST00000357475 FAHD1Q6P587 224 aa22.72■■□□□ 1.23
SSBP3-202ENST00000357475 CCDC103Q8IW40 242 aa22.72■■□□□ 1.23
SSBP3-202ENST00000357475 FAM57AQ8TBR7 257 aa22.72■■□□□ 1.23
SSBP3-202ENST00000357475 GNPDA2Q8TDQ7 276 aa22.72■■□□□ 1.23
SSBP3-202ENST00000357475 NRG4Q8WWG1 115 aa22.72■■□□□ 1.23
SSBP3-202ENST00000357475 FKRPQ9H9S5 495 aa22.72■■□□□ 1.23
SSBP3-202ENST00000357475 TMEM5Q9Y2B1 443 aa22.72■■□□□ 1.23
SSBP3-202ENST00000357475 ZNF835Q9Y2P0 537 aa22.72■■□□□ 1.23
SSBP3-202ENST00000357475 CLCA1A8K7I4 914 aa22.71■■□□□ 1.23
SSBP3-202ENST00000357475 P2RY4P51582 365 aa22.71■■□□□ 1.23
SSBP3-202ENST00000357475 RAC3P60763 192 aa22.71■■□□□ 1.23
SSBP3-202ENST00000357475 PON3Q15166 354 aa22.71■■□□□ 1.23
SSBP3-202ENST00000357475 PPP4R4Q6NUP7 873 aa22.71■■□□□ 1.23
SSBP3-202ENST00000357475 C3P1Q6ZMU1 363 aa22.71■■□□□ 1.23
SSBP3-202ENST00000357475 KDM8Q8N371 416 aa22.71■■□□□ 1.23
SSBP3-202ENST00000357475 CBR4Q8N4T8 237 aa22.71■■□□□ 1.23
SSBP3-202ENST00000357475 OR6S1Q8NH40 331 aa22.71■■□□□ 1.23
SSBP3-202ENST00000357475 OR51A7Q8NH64 312 aa22.71■■□□□ 1.23
SSBP3-202ENST00000357475 SLC19A2O60779 497 aa22.7■■□□□ 1.22
SSBP3-202ENST00000357475 MITFO75030 526 aaPredicted RBP22.7■■□□□ 1.22
SSBP3-202ENST00000357475 MT-ATP6P00846 226 aa22.7■■□□□ 1.22
SSBP3-202ENST00000357475 IGFBP1P08833 259 aaPredicted RBP22.7■■□□□ 1.22
SSBP3-202ENST00000357475 FPR3P25089 353 aa22.7■■□□□ 1.22
SSBP3-202ENST00000357475 RPS3AP61247 264 aaKnown RBP22.7■■□□□ 1.22
SSBP3-202ENST00000357475 CSNK2A1P68400 391 aaPredicted RBP22.7■■□□□ 1.22
SSBP3-202ENST00000357475 SLC35A1P78382 337 aa22.7■■□□□ 1.22
SSBP3-202ENST00000357475 H3F3AP84243 136 aa22.7■■□□□ 1.22
SSBP3-202ENST00000357475 ZNF239Q16600 458 aaKnown RBP22.7■■□□□ 1.22
SSBP3-202ENST00000357475 MAMDC2Q7Z304 686 aaPredicted RBP22.7■■□□□ 1.22
SSBP3-202ENST00000357475 PM20D2Q8IYS1 436 aa22.7■■□□□ 1.22
SSBP3-202ENST00000357475 CDK20Q8IZL9 346 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms