RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 SLC44A3Q8N4M1 653 aa7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 BPIFCQ8NFQ6 507 aa7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 OR14A16Q8NHC5 309 aa7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 OR8D1Q8WZ84 308 aa7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 SLC35A4Q96G79 324 aa7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 DERL3Q96Q80 235 aa7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 SLC25A18Q9H1K4 315 aa7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 PELI2Q9HAT8 420 aa7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 GHRLQ9UBU3 117 aa7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 ZNF69Q9UC07 566 aa7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 NPTNQ9Y639 398 aa7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 DENND4AQ7Z401 1863 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 A0A1W2PPV9 198 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 ZNF860A6NHJ4 632 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 MCRIP1C9JLW8 97 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 LRRN3E7EW58 273 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 GPR31O00270 319 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 NARSO43776 548 aaKnown RBP7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 SERPINA3P01011 423 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 EGFP01133 1207 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 ASGR2P07307 311 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 ADH1AP07327 375 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 LAMP2P13473 410 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 S100A11P31949 105 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 THBS2P35442 1172 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 PSMB10P40306 273 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 ZP1P60852 638 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 RAB5BP61020 215 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 SIM1P81133 766 aaPredicted RBP7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 PRDX1Q06830 199 aaKnown RBP7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 CCINQ13939 588 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 CRMP1Q14194 572 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 DHCR24Q15392 516 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 SSX2Q16385 188 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 TMEM44Q2T9K0 475 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 EIF2S3LQ2VIR3 472 aaKnown RBP7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 OR2B11Q5JQS5 317 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 FIGNL1Q6PIW4 674 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 MTSS1LQ765P7 747 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 RHOUQ7L0Q8 258 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 NAXDQ8IW45 347 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 CDK20Q8IZL9 346 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 SVBPQ8N300 66 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 OR5M9Q8NGP3 310 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 OR4C6Q8NH72 309 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 SMPDL3BQ92485 455 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 DEFB118Q96PH6 123 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 OR14A2Q96R54 314 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 TEAD3Q99594 435 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 PDCD1LG2Q9BQ51 273 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 LRRN3Q9H3W5 708 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 CHMP1AQ9HD42 196 aaPredicted RBP7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 KRCC1Q9NPI7 259 aaPredicted RBP7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 NANSQ9NR45 359 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 ASH2LQ9UBL3 628 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 GPR34Q9UPC5 381 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 EXOGQ9Y2C4 368 aaKnown RBP7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 PLEKHM1Q9Y4G2 1056 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 TCF20Q9UGU0 1960 aaKnown RBP7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 RIIAD1A6NNX1 92 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 HIDE1A8MVS5 230 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 ZNF593O00488 134 aaPredicted RBP7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 ARPC1BO15143 372 aaKnown RBP7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 FLRT2O43155 660 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 TXNL1O43396 289 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 KHDRBS3O75525 346 aaKnown RBP7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 STX11O75558 287 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 PPP1R3DO95685 299 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 LY86O95711 162 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 PAK4O96013 591 aaPredicted RBP7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 HPP00738 406 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 ACRP10323 421 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 LAG3P18627 525 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 GDNFP39905 211 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 VIPR2P41587 438 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 DECR1Q16698 335 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 COL13A1Q5TAT6 717 aaPredicted RBP7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 SSX6Q7RTT6 188 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 GRASPQ7Z6J2 395 aaPredicted RBP7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 LDLRAD3Q86YD5 345 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 TMEFF1Q8IYR6 380 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 MEIOBQ8N635 442 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 PXT1Q8NFP0 134 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 THAP6Q8TBB0 222 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 LGALS14Q8TCE9 139 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 SNX33Q8WV41 574 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 THAP4Q8WY91 577 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 MS4A6EQ96DS6 147 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 PEX11GQ96HA9 241 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 TMEM41AQ96HV5 264 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 DMRTA2Q96SC8 542 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 ZNF559Q9BR84 538 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 ARL6Q9H0F7 186 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 C20orf85Q9H1P6 137 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 SLC6A20Q9NP91 592 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 NFKBIL1Q9UBC1 381 aaPredicted RBP7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 GNG8Q9UK08 70 aa7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 ATXN7L1Q9ULK2 861 aaPredicted RBP7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 ZNF443Q9Y2A4 671 aaPredicted RBP7.6□□□□□ -1.19
CDC42SE1-201ENST00000357235 GON4LQ3T8J9 2241 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms