RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 OR2L5Q8NG80 312 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 HMGB4Q8WW32 186 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 TRMT2BQ96GJ1 504 aaKnown RBP6.11□□□□□ -1.43
TRIM38-201ENST00000357085 CNTNAP3Q9BZ76 1288 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 SUV39H2Q9H5I1 410 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 GLTPD2A6NH11 291 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 SLC25A12O75746 678 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 THBS1P07996 1170 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 HOXB3P14651 431 aaPredicted RBP6.11□□□□□ -1.43
TRIM38-201ENST00000357085 TNFRSF1BP20333 461 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 SOX18P35713 384 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 PITX1P78337 314 aaPredicted RBP6.11□□□□□ -1.43
TRIM38-201ENST00000357085 FABP9Q0Z7S8 132 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 SLC5A12Q1EHB4 618 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 C18orf21Q32NC0 220 aaPredicted RBP6.11□□□□□ -1.43
TRIM38-201ENST00000357085 C9orf152Q5JTZ5 239 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 SUSD1Q6UWL2 747 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 TMPRSS12Q86WS5 348 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 CLECL1Q8IZS7 167 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 NAGSQ8N159 534 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 HASPINQ8TF76 798 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 FZD1Q9UP38 647 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 GPR34Q9UPC5 381 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 NLRC5Q86WI3 1866 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 C13orf42A0A1B0GVH6 325 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 A0A1W2PS29 197 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 ANHXE9PGG2 379 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 XRCC3O43542 346 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 SLCO2B1O94956 709 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 PAPLNO95428 1278 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 RAB3DO95716 219 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 CH25HO95992 272 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 APBA3O96018 575 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 PKIAP61925 76 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 TBPL1P62380 186 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 CRHR2Q13324 411 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 ST3GAL2Q16842 350 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 AMZ1Q400G9 498 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 ABLIM2Q6H8Q1 611 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 KCTD9Q7L273 389 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 OR13D1Q8NGV5 346 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 OR6K6Q8NGW6 343 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 MFSD8Q8NHS3 518 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 PXYLP1Q8TE99 480 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 OR14A2Q96R54 314 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 MIXL1Q9H2W2 232 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 GHITMQ9H3K2 345 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 ADAP2Q9NPF8 381 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.11□□□□□ -1.43
TRIM38-201ENST00000357085 ELOA3DA6NLF2 546 aaPredicted RBP6.11□□□□□ -1.43
TRIM38-201ENST00000357085 PPM1DO15297 605 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 SLC25A4P12235 298 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 FGF7P21781 194 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 AHRP35869 848 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 SERPINF1P36955 418 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 ELOA3BQ3SY89 546 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 CHRFAM7AQ494W8 412 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 C22orf39Q6P5X5 142 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 OPN5Q6U736 354 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 MOB3CQ70IA8 216 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 ZDHHC22Q8N966 263 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 PLPP5Q8NEB5 264 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 ELOA3Q8NG57 546 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 OR10H5Q8NGA6 315 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 OR8S1Q8NH09 359 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 WDR34Q96EX3 536 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 RLIMQ9NVW2 624 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 ZNF337Q9Y3M9 751 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 TIMM13Q9Y5L4 95 aaPredicted RBP6.11□□□□□ -1.43
TRIM38-201ENST00000357085 BRCA1P38398 1863 aaKnown RBP6.11□□□□□ -1.43
TRIM38-201ENST00000357085 GABRR3A8MPY1 467 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 SEC14L6B5MCN3 397 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 UMAD1C9J7I0 102 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 HCRTR2O43614 444 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 MSR1P21757 451 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 IL13RA1P78552 427 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 SMAD3P84022 425 aaKnown RBP6.11□□□□□ -1.43
TRIM38-201ENST00000357085 FABP5Q01469 135 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 RBM39Q14498 530 aaKnown RBP6.11□□□□□ -1.43
TRIM38-201ENST00000357085 PNLIPRP3Q17RR3 467 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 FAM180BQ6P0A1 224 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 TMEM150AQ86TG1 271 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 PARGQ86W56 976 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 GALNT16Q8N428 558 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 SLC38A5Q8WUX1 472 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 KHSRPQ92945 711 aaKnown RBP eCLIP6.11□□□□□ -1.43
TRIM38-201ENST00000357085 TMEM169Q96HH4 297 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 BARHL1Q9BZE3 327 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 PLEKHA2Q9HB19 425 aa6.11□□□□□ -1.43
TRIM38-201ENST00000357085 FAM74A7A6NL05 159 aa6.1□□□□□ -1.43
TRIM38-201ENST00000357085 SMAD9O15198 467 aaKnown RBP6.1□□□□□ -1.43
TRIM38-201ENST00000357085 SUSD5O60279 629 aa6.1□□□□□ -1.43
TRIM38-201ENST00000357085 PRLHRP49683 370 aa6.1□□□□□ -1.43
TRIM38-201ENST00000357085 FAM74A3Q4VXF1 159 aa6.1□□□□□ -1.43
TRIM38-201ENST00000357085 PODNL1Q6PEZ8 512 aa6.1□□□□□ -1.43
TRIM38-201ENST00000357085 SERINC5Q86VE9 423 aa6.1□□□□□ -1.43
TRIM38-201ENST00000357085 MICU1Q9BPX6 476 aa6.1□□□□□ -1.43
TRIM38-201ENST00000357085 NUDT16L1Q9BRJ7 211 aaKnown RBP6.1□□□□□ -1.43
TRIM38-201ENST00000357085 FBXW2Q9UKT8 454 aa6.1□□□□□ -1.43
TRIM38-201ENST00000357085 POM121BA6NF01 834 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms