RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 LSAMPQ13449 338 aa16.75■□□□□ 0.27
COL18A1-202ENST00000355480 CNTNAP3BQ96NU0 1288 aa16.75■□□□□ 0.27
COL18A1-202ENST00000355480 HIPK2Q9H2X6 1198 aa16.75■□□□□ 0.27
COL18A1-202ENST00000355480 SDK1Q7Z5N4 2213 aa16.75■□□□□ 0.27
COL18A1-202ENST00000355480 T-ENOLP0DO92 83 aa16.74■□□□□ 0.27
COL18A1-202ENST00000355480 PTGER4P35408 488 aa16.74■□□□□ 0.27
COL18A1-202ENST00000355480 CLDN6P56747 220 aa16.74■□□□□ 0.27
COL18A1-202ENST00000355480 TAS2R19P59542 299 aa16.74■□□□□ 0.27
COL18A1-202ENST00000355480 OR4N2Q8NGD1 307 aa16.74■□□□□ 0.27
COL18A1-202ENST00000355480 MFFQ9GZY8 342 aa16.74■□□□□ 0.27
COL18A1-202ENST00000355480 OR51J1Q9H342 316 aa16.74■□□□□ 0.27
COL18A1-202ENST00000355480 LHX6Q9UPM6 363 aa16.74■□□□□ 0.27
COL18A1-202ENST00000355480 PRAMEF27A3QJZ7 478 aa16.74■□□□□ 0.27
COL18A1-202ENST00000355480 C21orf33P30042 268 aaPredicted RBP16.74■□□□□ 0.27
COL18A1-202ENST00000355480 OR1D5P58170 312 aa16.74■□□□□ 0.27
COL18A1-202ENST00000355480 PRAMEF9Q5VWM5 478 aa16.74■□□□□ 0.27
COL18A1-202ENST00000355480 ESX1Q8N693 406 aa16.74■□□□□ 0.27
COL18A1-202ENST00000355480 FRZBQ92765 325 aa16.74■□□□□ 0.27
COL18A1-202ENST00000355480 GGHQ92820 318 aa16.74■□□□□ 0.27
COL18A1-202ENST00000355480 MIB2Q96AX9 1013 aa16.74■□□□□ 0.27
COL18A1-202ENST00000355480 C7orf50Q9BRJ6 194 aaKnown RBP16.74■□□□□ 0.27
COL18A1-202ENST00000355480 MS4A8Q9BY19 250 aa16.74■□□□□ 0.27
COL18A1-202ENST00000355480 CPNE5Q9HCH3 593 aa16.74■□□□□ 0.27
COL18A1-202ENST00000355480 FBXO7Q9Y3I1 522 aa16.74■□□□□ 0.27
COL18A1-202ENST00000355480 DOT1LQ8TEK3 1739 aa16.74■□□□□ 0.27
COL18A1-202ENST00000355480 MTHFD2P13995 350 aa16.74■□□□□ 0.27
COL18A1-202ENST00000355480 PRKACBP22694 351 aa16.74■□□□□ 0.27
COL18A1-202ENST00000355480 CD27P26842 260 aa16.74■□□□□ 0.27
COL18A1-202ENST00000355480 MSMO1Q15800 293 aa16.74■□□□□ 0.27
COL18A1-202ENST00000355480 OR14A2Q96R54 314 aa16.74■□□□□ 0.27
COL18A1-202ENST00000355480 TNFRSF13CQ96RJ3 184 aa16.74■□□□□ 0.27
COL18A1-202ENST00000355480 CPPED1Q9BRF8 314 aaPredicted RBP16.74■□□□□ 0.27
COL18A1-202ENST00000355480 HSPB6O14558 160 aa16.74■□□□□ 0.27
COL18A1-202ENST00000355480 BET1O15155 118 aa16.74■□□□□ 0.27
COL18A1-202ENST00000355480 BIDP55957 195 aa16.74■□□□□ 0.27
COL18A1-202ENST00000355480 UCN3Q969E3 161 aa16.74■□□□□ 0.27
COL18A1-202ENST00000355480 SGK3Q96BR1 496 aa16.74■□□□□ 0.27
COL18A1-202ENST00000355480 ZNF578Q96N58 590 aaPredicted RBP16.74■□□□□ 0.27
COL18A1-202ENST00000355480 SLC46A1Q96NT5 459 aa16.74■□□□□ 0.27
COL18A1-202ENST00000355480 CITO14578 2027 aa16.74■□□□□ 0.27
COL18A1-202ENST00000355480 TRAV36DV7A0A075B6V5 113 aa16.74■□□□□ 0.27
COL18A1-202ENST00000355480 GPR137BO60478 399 aa16.74■□□□□ 0.27
COL18A1-202ENST00000355480 GASTP01350 101 aa16.74■□□□□ 0.27
COL18A1-202ENST00000355480 EMX1Q04741 257 aaPredicted RBP16.74■□□□□ 0.27
COL18A1-202ENST00000355480 MLLT11Q13015 90 aaPredicted RBP16.74■□□□□ 0.27
COL18A1-202ENST00000355480 ANKRD19PQ9H560 264 aa16.74■□□□□ 0.27
COL18A1-202ENST00000355480 NOX3Q9HBY0 568 aa16.74■□□□□ 0.27
COL18A1-202ENST00000355480 ATP13A2Q9NQ11 1180 aa16.74■□□□□ 0.27
COL18A1-202ENST00000355480 HIF1ANQ9NWT6 349 aa16.74■□□□□ 0.27
COL18A1-202ENST00000355480 PRELID1Q9Y255 219 aa16.74■□□□□ 0.27
COL18A1-202ENST00000355480 ENSAO43768 121 aaKnown RBP16.73■□□□□ 0.27
COL18A1-202ENST00000355480 DPM1O60762 260 aa16.73■□□□□ 0.27
COL18A1-202ENST00000355480 STK17BO94768 372 aa16.73■□□□□ 0.27
COL18A1-202ENST00000355480 ZNF91Q05481 1191 aa16.73■□□□□ 0.27
COL18A1-202ENST00000355480 PARM1Q6UWI2 310 aa16.73■□□□□ 0.27
COL18A1-202ENST00000355480 NPSR1Q6W5P4 371 aa16.73■□□□□ 0.27
COL18A1-202ENST00000355480 ZNF740Q8NDX6 193 aa16.73■□□□□ 0.27
COL18A1-202ENST00000355480 ALG12Q9BV10 488 aa16.73■□□□□ 0.27
COL18A1-202ENST00000355480 ANKRD10Q9NXR5 420 aa16.73■□□□□ 0.27
COL18A1-202ENST00000355480 MYH8P13535 1937 aa16.73■□□□□ 0.27
COL18A1-202ENST00000355480 TMEM72A0PK05 275 aa16.73■□□□□ 0.27
COL18A1-202ENST00000355480 KLRC4-KLRK1H3BQV0 150 aa16.73■□□□□ 0.27
COL18A1-202ENST00000355480 MCCD1P59942 119 aaPredicted RBP16.73■□□□□ 0.27
COL18A1-202ENST00000355480 HTD2P86397 168 aa16.73■□□□□ 0.27
COL18A1-202ENST00000355480 TMEM52BQ4KMG9 183 aa16.73■□□□□ 0.27
COL18A1-202ENST00000355480 OR2G6Q5TZ20 316 aa16.73■□□□□ 0.27
COL18A1-202ENST00000355480 SLX4IPQ5VYV7 408 aa16.73■□□□□ 0.27
COL18A1-202ENST00000355480 OR52W1Q6IF63 320 aa16.73■□□□□ 0.27
COL18A1-202ENST00000355480 VRK3Q8IV63 474 aa16.73■□□□□ 0.27
COL18A1-202ENST00000355480 PRDM9Q9NQV7 894 aa16.73■□□□□ 0.27
COL18A1-202ENST00000355480 MYOTQ9UBF9 498 aa16.73■□□□□ 0.27
COL18A1-202ENST00000355480 MMACHCQ9Y4U1 282 aa16.73■□□□□ 0.27
COL18A1-202ENST00000355480 MCRIP1C9JLW8 97 aa16.73■□□□□ 0.27
COL18A1-202ENST00000355480 HOXB5P09067 269 aa16.73■□□□□ 0.27
COL18A1-202ENST00000355480 F2RL1P55085 397 aa16.73■□□□□ 0.27
COL18A1-202ENST00000355480 ESPNLQ6ZVH7 1005 aa16.73■□□□□ 0.27
COL18A1-202ENST00000355480 SLC25A31Q9H0C2 315 aa16.73■□□□□ 0.27
COL18A1-202ENST00000355480 GNG12Q9UBI6 72 aa16.73■□□□□ 0.27
COL18A1-202ENST00000355480 C4BP0C0L5 1744 aa16.73■□□□□ 0.27
COL18A1-202ENST00000355480 SLC34A2O95436 690 aa16.73■□□□□ 0.27
COL18A1-202ENST00000355480 ABHD16AO95870 558 aa16.73■□□□□ 0.27
COL18A1-202ENST00000355480 MFAP5Q13361 173 aa16.73■□□□□ 0.27
COL18A1-202ENST00000355480 DUSP7Q16829 419 aa16.73■□□□□ 0.27
COL18A1-202ENST00000355480 SFRP5Q5T4F7 317 aa16.73■□□□□ 0.27
COL18A1-202ENST00000355480 ZNF585AQ6P3V2 769 aa16.73■□□□□ 0.27
COL18A1-202ENST00000355480 NCCRP1Q6ZVX7 275 aaPredicted RBP16.73■□□□□ 0.27
COL18A1-202ENST00000355480 BBS1Q8NFJ9 593 aa16.73■□□□□ 0.27
COL18A1-202ENST00000355480 DMBX1Q8NFW5 382 aa16.73■□□□□ 0.27
COL18A1-202ENST00000355480 OR13C9Q8NGT0 318 aa16.73■□□□□ 0.27
COL18A1-202ENST00000355480 UBXN10Q96LJ8 280 aa16.73■□□□□ 0.27
COL18A1-202ENST00000355480 ZIC5Q96T25 663 aa16.73■□□□□ 0.27
COL18A1-202ENST00000355480 STEAP1Q9UHE8 339 aa16.73■□□□□ 0.27
COL18A1-202ENST00000355480 OR5K3A6NET4 321 aa16.72■□□□□ 0.27
COL18A1-202ENST00000355480 GABRPO00591 440 aa16.72■□□□□ 0.27
COL18A1-202ENST00000355480 ZNF254O75437 659 aa16.72■□□□□ 0.27
COL18A1-202ENST00000355480 FURINP09958 794 aa16.72■□□□□ 0.27
COL18A1-202ENST00000355480 FCRLAQ7L513 359 aa16.72■□□□□ 0.27
COL18A1-202ENST00000355480 ZADH2Q8N4Q0 377 aa16.72■□□□□ 0.27
COL18A1-202ENST00000355480 OR4M1Q8NGD0 313 aa16.72■□□□□ 0.27
COL18A1-202ENST00000355480 CXCL16Q9H2A7 254 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms