RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 SLC10A3P09131 477 aa11.86□□□□□ -0.51
SYNCRIP-201ENST00000355238 CLDN12P56749 244 aa11.86□□□□□ -0.51
SYNCRIP-201ENST00000355238 HOXC5Q00444 222 aa11.86□□□□□ -0.51
SYNCRIP-201ENST00000355238 RDH10Q8IZV5 341 aa11.86□□□□□ -0.51
SYNCRIP-201ENST00000355238 APCDD1Q8J025 514 aa11.86□□□□□ -0.51
SYNCRIP-201ENST00000355238 ACOT4Q8N9L9 421 aa11.86□□□□□ -0.51
SYNCRIP-201ENST00000355238 ANKRD19PQ9H560 264 aa11.86□□□□□ -0.51
SYNCRIP-201ENST00000355238 CCDC163A0A0D9SF12 145 aa11.85□□□□□ -0.51
SYNCRIP-201ENST00000355238 CTU2Q2VPK5 515 aaKnown RBP11.85□□□□□ -0.51
SYNCRIP-201ENST00000355238 Q6ZSR9 355 aa11.85□□□□□ -0.51
SYNCRIP-201ENST00000355238 ABHD12BQ7Z5M8 362 aaPredicted RBP11.85□□□□□ -0.51
SYNCRIP-201ENST00000355238 BAGE3Q86Y29 109 aa11.85□□□□□ -0.51
SYNCRIP-201ENST00000355238 BAGE2Q86Y30 109 aa11.85□□□□□ -0.51
SYNCRIP-201ENST00000355238 KCNRGQ8N5I3 272 aa11.85□□□□□ -0.51
SYNCRIP-201ENST00000355238 FIBINQ8TAL6 211 aa11.85□□□□□ -0.51
SYNCRIP-201ENST00000355238 ASB11Q8WXH4 323 aa11.85□□□□□ -0.51
SYNCRIP-201ENST00000355238 AMBRA1Q9C0C7 1298 aa11.85□□□□□ -0.51
SYNCRIP-201ENST00000355238 TAAR5O14804 337 aa11.85□□□□□ -0.51
SYNCRIP-201ENST00000355238 IL1RNP18510 177 aa11.85□□□□□ -0.51
SYNCRIP-201ENST00000355238 RAB1AP62820 205 aa11.85□□□□□ -0.51
SYNCRIP-201ENST00000355238 SELENBP1Q13228 472 aa11.85□□□□□ -0.51
SYNCRIP-201ENST00000355238 MELKQ14680 651 aa11.85□□□□□ -0.51
SYNCRIP-201ENST00000355238 SLC43A2Q8N370 569 aa11.85□□□□□ -0.51
SYNCRIP-201ENST00000355238 ZNF561Q8N587 486 aa11.85□□□□□ -0.51
SYNCRIP-201ENST00000355238 RNF32Q9H0A6 362 aa11.85□□□□□ -0.51
SYNCRIP-201ENST00000355238 LDAHQ9H6V9 325 aa11.85□□□□□ -0.51
SYNCRIP-201ENST00000355238 NDUFB11Q9NX14 153 aa11.85□□□□□ -0.51
SYNCRIP-201ENST00000355238 A0A0A6YYJ9 748 aa11.85□□□□□ -0.51
SYNCRIP-201ENST00000355238 C17orf112F2Z3M2 114 aa11.85□□□□□ -0.51
SYNCRIP-201ENST00000355238 GFRA2O00451 464 aa11.85□□□□□ -0.51
SYNCRIP-201ENST00000355238 RGS11O94810 467 aa11.85□□□□□ -0.51
SYNCRIP-201ENST00000355238 OR2C1O95371 312 aa11.85□□□□□ -0.51
SYNCRIP-201ENST00000355238 TPOP07202 933 aa11.85□□□□□ -0.51
SYNCRIP-201ENST00000355238 HOXA9P31269 272 aa11.85□□□□□ -0.51
SYNCRIP-201ENST00000355238 HBG1P69891 147 aa11.85□□□□□ -0.51
SYNCRIP-201ENST00000355238 HBG2P69892 147 aa11.85□□□□□ -0.51
SYNCRIP-201ENST00000355238 CD300LGQ6UXG3 332 aa11.85□□□□□ -0.51
SYNCRIP-201ENST00000355238 TSSK2Q96PF2 358 aa11.85□□□□□ -0.51
SYNCRIP-201ENST00000355238 C16orf70Q9BSU1 422 aa11.85□□□□□ -0.51
SYNCRIP-201ENST00000355238 TMEM38AQ9H6F2 299 aa11.85□□□□□ -0.51
SYNCRIP-201ENST00000355238 TAF9BQ9HBM6 251 aa11.85□□□□□ -0.51
SYNCRIP-201ENST00000355238 CLEC2DQ9UHP7 191 aa11.85□□□□□ -0.51
SYNCRIP-201ENST00000355238 DRGXA6NNA5 263 aa11.85□□□□□ -0.51
SYNCRIP-201ENST00000355238 LCATP04180 440 aa11.85□□□□□ -0.51
SYNCRIP-201ENST00000355238 AARDQ4LEZ3 155 aa11.85□□□□□ -0.51
SYNCRIP-201ENST00000355238 ZMAT1Q5H9K5 638 aa11.85□□□□□ -0.51
SYNCRIP-201ENST00000355238 BRICD5Q6PL45 260 aa11.85□□□□□ -0.51
SYNCRIP-201ENST00000355238 OR9A4Q8NGU2 314 aa11.85□□□□□ -0.51
SYNCRIP-201ENST00000355238 YIPF6Q96EC8 236 aa11.85□□□□□ -0.51
SYNCRIP-201ENST00000355238 ZFYVE21Q9BQ24 234 aa11.85□□□□□ -0.51
SYNCRIP-201ENST00000355238 ADAM29Q9UKF5 820 aa11.85□□□□□ -0.51
SYNCRIP-201ENST00000355238 PEX12O00623 359 aa11.85□□□□□ -0.51
SYNCRIP-201ENST00000355238 AOAHP28039 575 aa11.85□□□□□ -0.51
SYNCRIP-201ENST00000355238 ELOCQ15369 112 aa11.85□□□□□ -0.51
SYNCRIP-201ENST00000355238 HYAL4Q2M3T9 481 aa11.85□□□□□ -0.51
SYNCRIP-201ENST00000355238 EEF1A1P5Q5VTE0 462 aa11.85□□□□□ -0.51
SYNCRIP-201ENST00000355238 PRAMEF8Q5VWM4 474 aa11.85□□□□□ -0.51
SYNCRIP-201ENST00000355238 PRAMEF7Q5VXH5 474 aa11.85□□□□□ -0.51
SYNCRIP-201ENST00000355238 RAET1LQ5VY80 246 aa11.85□□□□□ -0.51
SYNCRIP-201ENST00000355238 NAA40Q86UY6 237 aa11.85□□□□□ -0.51
SYNCRIP-201ENST00000355238 SLC38A5Q8WUX1 472 aa11.85□□□□□ -0.51
SYNCRIP-201ENST00000355238 MAP6Q96JE9 813 aa11.85□□□□□ -0.51
SYNCRIP-201ENST00000355238 LIN7BQ9HAP6 207 aa11.85□□□□□ -0.51
SYNCRIP-201ENST00000355238 KCPQ6ZWJ8 1503 aa11.84□□□□□ -0.51
SYNCRIP-201ENST00000355238 NPIPB15A6NHN6 443 aaPredicted RBP11.84□□□□□ -0.51
SYNCRIP-201ENST00000355238 H0YIV9 168 aa11.84□□□□□ -0.51
SYNCRIP-201ENST00000355238 CPN1P15169 458 aa11.84□□□□□ -0.51
SYNCRIP-201ENST00000355238 NAGAP17050 411 aa11.84□□□□□ -0.51
SYNCRIP-201ENST00000355238 GPX2P18283 190 aa11.84□□□□□ -0.51
SYNCRIP-201ENST00000355238 RPS18P62269 152 aaKnown RBP11.84□□□□□ -0.51
SYNCRIP-201ENST00000355238 CST9LP1Q5W188 147 aa11.84□□□□□ -0.51
SYNCRIP-201ENST00000355238 PEX11GQ96HA9 241 aa11.84□□□□□ -0.51
SYNCRIP-201ENST00000355238 SORBS1Q9BX66 1292 aaKnown RBP11.84□□□□□ -0.51
SYNCRIP-201ENST00000355238 SMG9Q9H0W8 520 aaKnown RBP11.84□□□□□ -0.51
SYNCRIP-201ENST00000355238 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.84□□□□□ -0.51
SYNCRIP-201ENST00000355238 ASIC5Q9NY37 505 aa11.84□□□□□ -0.51
SYNCRIP-201ENST00000355238 TXNDC12O95881 172 aa11.84□□□□□ -0.51
SYNCRIP-201ENST00000355238 TK1P04183 234 aa11.84□□□□□ -0.51
SYNCRIP-201ENST00000355238 CPEP16870 476 aa11.84□□□□□ -0.51
SYNCRIP-201ENST00000355238 SRP9P49458 86 aaKnown RBP11.84□□□□□ -0.51
SYNCRIP-201ENST00000355238 ZBTB37Q5TC79 503 aa11.84□□□□□ -0.51
SYNCRIP-201ENST00000355238 FAM111BQ6SJ93 734 aa11.84□□□□□ -0.51
SYNCRIP-201ENST00000355238 OVCH1Q7RTY7 1134 aa11.84□□□□□ -0.51
SYNCRIP-201ENST00000355238 FAM160A2Q8N612 972 aaPredicted RBP11.84□□□□□ -0.51
SYNCRIP-201ENST00000355238 OR5AR1Q8NGP9 310 aa11.84□□□□□ -0.51
SYNCRIP-201ENST00000355238 ASB13Q8WXK3 278 aa11.84□□□□□ -0.51
SYNCRIP-201ENST00000355238 OR1E3Q8WZA6 343 aa11.84□□□□□ -0.51
SYNCRIP-201ENST00000355238 A4GALTQ9NPC4 353 aa11.84□□□□□ -0.51
SYNCRIP-201ENST00000355238 SLC39A9Q9NUM3 307 aa11.84□□□□□ -0.51
SYNCRIP-201ENST00000355238 SLC16A7O60669 478 aa11.84□□□□□ -0.51
SYNCRIP-201ENST00000355238 FOLR1P15328 257 aa11.84□□□□□ -0.51
SYNCRIP-201ENST00000355238 KCNJ5P48544 419 aa11.84□□□□□ -0.51
SYNCRIP-201ENST00000355238 NOVP48745 357 aa11.84□□□□□ -0.51
SYNCRIP-201ENST00000355238 SQSTM1Q13501 440 aa11.84□□□□□ -0.51
SYNCRIP-201ENST00000355238 RAB33AQ14088 237 aa11.84□□□□□ -0.51
SYNCRIP-201ENST00000355238 WBP2NLQ6ICG8 309 aa11.84□□□□□ -0.51
SYNCRIP-201ENST00000355238 CNKSR3Q6P9H4 555 aa11.84□□□□□ -0.51
SYNCRIP-201ENST00000355238 NANPQ8TBE9 248 aa11.84□□□□□ -0.51
SYNCRIP-201ENST00000355238 MSI2Q96DH6 328 aaKnown RBP11.84□□□□□ -0.51
SYNCRIP-201ENST00000355238 NECTIN4Q96NY8 510 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms