RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 MNTQ99583 582 aa9.3□□□□□ -0.92
SYNE1-203ENST00000354674 FXYD6Q9H0Q3 95 aa9.3□□□□□ -0.92
SYNE1-203ENST00000354674 TMEM231Q9H6L2 316 aa9.3□□□□□ -0.92
SYNE1-203ENST00000354674 EXTL2Q9UBQ6 330 aa9.3□□□□□ -0.92
SYNE1-203ENST00000354674 DAPP1Q9UN19 280 aa9.3□□□□□ -0.92
SYNE1-203ENST00000354674 GOLGA4Q13439 2230 aaKnown RBP9.3□□□□□ -0.92
SYNE1-203ENST00000354674 CPED1A4D0V7 1026 aa9.3□□□□□ -0.92
SYNE1-203ENST00000354674 SULT1C2O00338 296 aa9.3□□□□□ -0.92
SYNE1-203ENST00000354674 ICOSLGO75144 302 aa9.3□□□□□ -0.92
SYNE1-203ENST00000354674 AIFM1O95831 613 aa9.3□□□□□ -0.92
SYNE1-203ENST00000354674 FPR1P21462 350 aa9.3□□□□□ -0.92
SYNE1-203ENST00000354674 GRK6P43250 576 aa9.3□□□□□ -0.92
SYNE1-203ENST00000354674 GZMMP51124 257 aa9.3□□□□□ -0.92
SYNE1-203ENST00000354674 LIM2P55344 173 aa9.3□□□□□ -0.92
SYNE1-203ENST00000354674 SLC3A1Q07837 685 aa9.3□□□□□ -0.92
SYNE1-203ENST00000354674 FAM53BQ14153 422 aa9.3□□□□□ -0.92
SYNE1-203ENST00000354674 DEFB134Q4QY38 66 aa9.3□□□□□ -0.92
SYNE1-203ENST00000354674 PABPC1L2AQ5JQF8 200 aa9.3□□□□□ -0.92
SYNE1-203ENST00000354674 OR2B11Q5JQS5 317 aa9.3□□□□□ -0.92
SYNE1-203ENST00000354674 NHLRC3Q5JS37 347 aa9.3□□□□□ -0.92
SYNE1-203ENST00000354674 SLC48A1Q6P1K1 146 aa9.3□□□□□ -0.92
SYNE1-203ENST00000354674 SERPINA12Q8IW75 414 aa9.3□□□□□ -0.92
SYNE1-203ENST00000354674 AKR7LQ8NHP1 331 aa9.3□□□□□ -0.92
SYNE1-203ENST00000354674 ZCCHC10Q8TBK6 192 aa9.3□□□□□ -0.92
SYNE1-203ENST00000354674 IFI44Q8TCB0 444 aa9.3□□□□□ -0.92
SYNE1-203ENST00000354674 TM9SF4Q92544 642 aa9.3□□□□□ -0.92
SYNE1-203ENST00000354674 GCDHQ92947 438 aaPredicted RBP9.3□□□□□ -0.92
SYNE1-203ENST00000354674 KATNB1Q9BVA0 655 aa9.3□□□□□ -0.92
SYNE1-203ENST00000354674 COL25A1Q9BXS0 654 aaPredicted RBP9.3□□□□□ -0.92
SYNE1-203ENST00000354674 MIEF1Q9NQG6 463 aa9.3□□□□□ -0.92
SYNE1-203ENST00000354674 ACSS1Q9NUB1 689 aaPredicted RBP9.3□□□□□ -0.92
SYNE1-203ENST00000354674 NDUFAF4Q9P032 175 aa9.3□□□□□ -0.92
SYNE1-203ENST00000354674 PHF11Q9UIL8 331 aa9.3□□□□□ -0.92
SYNE1-203ENST00000354674 A8MXK9 166 aa9.3□□□□□ -0.92
SYNE1-203ENST00000354674 ZNF670-ZNF695F2Z2N8 137 aa9.3□□□□□ -0.92
SYNE1-203ENST00000354674 NTN3O00634 580 aaPredicted RBP9.3□□□□□ -0.92
SYNE1-203ENST00000354674 CDX4O14627 284 aaPredicted RBP9.3□□□□□ -0.92
SYNE1-203ENST00000354674 B3GALT2O43825 422 aa9.3□□□□□ -0.92
SYNE1-203ENST00000354674 SELENOFO60613 162 aa9.3□□□□□ -0.92
SYNE1-203ENST00000354674 HCN1O60741 890 aa9.3□□□□□ -0.92
SYNE1-203ENST00000354674 DNAJB6O75190 326 aa9.3□□□□□ -0.92
SYNE1-203ENST00000354674 KHDRBS3O75525 346 aaKnown RBP9.3□□□□□ -0.92
SYNE1-203ENST00000354674 TFPIP10646 304 aa9.3□□□□□ -0.92
SYNE1-203ENST00000354674 TCF15Q12870 199 aa9.3□□□□□ -0.92
SYNE1-203ENST00000354674 RBM39Q14498 530 aaKnown RBP9.3□□□□□ -0.92
SYNE1-203ENST00000354674 TOMM20Q15388 145 aa9.3□□□□□ -0.92
SYNE1-203ENST00000354674 IDNKQ5T6J7 187 aa9.3□□□□□ -0.92
SYNE1-203ENST00000354674 NHLRC1Q6VVB1 395 aa9.3□□□□□ -0.92
SYNE1-203ENST00000354674 PRSS41Q7RTY9 318 aa9.3□□□□□ -0.92
SYNE1-203ENST00000354674 CALHM3Q86XJ0 350 aa9.3□□□□□ -0.92
SYNE1-203ENST00000354674 DUSP18Q8NEJ0 188 aa9.3□□□□□ -0.92
SYNE1-203ENST00000354674 SLC25A46Q96AG3 418 aa9.3□□□□□ -0.92
SYNE1-203ENST00000354674 SENP5Q96HI0 755 aaPredicted RBP9.3□□□□□ -0.92
SYNE1-203ENST00000354674 PANX1Q96RD7 426 aa9.3□□□□□ -0.92
SYNE1-203ENST00000354674 ZNF251Q9BRH9 671 aa9.3□□□□□ -0.92
SYNE1-203ENST00000354674 PDCD10Q9BUL8 212 aa9.3□□□□□ -0.92
SYNE1-203ENST00000354674 DNTTIP1Q9H147 329 aa9.3□□□□□ -0.92
SYNE1-203ENST00000354674 FOLH1BQ9HBA9 442 aa9.3□□□□□ -0.92
SYNE1-203ENST00000354674 STARD5Q9NSY2 213 aa9.3□□□□□ -0.92
SYNE1-203ENST00000354674 DTX4Q9Y2E6 619 aa9.3□□□□□ -0.92
SYNE1-203ENST00000354674 SLC6A5Q9Y345 797 aa9.3□□□□□ -0.92
SYNE1-203ENST00000354674 SDK1Q7Z5N4 2213 aa9.29□□□□□ -0.92
SYNE1-203ENST00000354674 PGRMC2O15173 223 aa9.29□□□□□ -0.92
SYNE1-203ENST00000354674 FLRT2O43155 660 aa9.29□□□□□ -0.92
SYNE1-203ENST00000354674 FOXS1O43638 330 aa9.29□□□□□ -0.92
SYNE1-203ENST00000354674 CPSF4O95639 269 aaKnown RBP9.29□□□□□ -0.92
SYNE1-203ENST00000354674 GP1BAP07359 652 aa9.29□□□□□ -0.92
SYNE1-203ENST00000354674 FAM157BP0CG42 384 aa9.29□□□□□ -0.92
SYNE1-203ENST00000354674 ACP1P24666 158 aa9.29□□□□□ -0.92
SYNE1-203ENST00000354674 HBA1P69905 142 aa9.29□□□□□ -0.92
SYNE1-203ENST00000354674 RPP30P78346 268 aaKnown RBP9.29□□□□□ -0.92
SYNE1-203ENST00000354674 SMCO1Q147U7 214 aa9.29□□□□□ -0.92
SYNE1-203ENST00000354674 C18orf63Q68DL7 685 aa9.29□□□□□ -0.92
SYNE1-203ENST00000354674 LYPD4Q6UWN0 246 aa9.29□□□□□ -0.92
SYNE1-203ENST00000354674 ESPNLQ6ZVH7 1005 aa9.29□□□□□ -0.92
SYNE1-203ENST00000354674 OVCH2Q7RTZ1 564 aa9.29□□□□□ -0.92
SYNE1-203ENST00000354674 ZNF551Q7Z340 670 aaPredicted RBP9.29□□□□□ -0.92
SYNE1-203ENST00000354674 MEX3DQ86XN8 651 aaKnown RBP9.29□□□□□ -0.92
SYNE1-203ENST00000354674 SOHLH2Q9NX45 425 aa9.29□□□□□ -0.92
SYNE1-203ENST00000354674 COL27A1Q8IZC6 1860 aaPredicted RBP9.29□□□□□ -0.92
SYNE1-203ENST00000354674 A0A1W2PRB8 838 aa9.29□□□□□ -0.92
SYNE1-203ENST00000354674 CD8B2A6NJW9 211 aa9.29□□□□□ -0.92
SYNE1-203ENST00000354674 CYR61O00622 381 aa9.29□□□□□ -0.92
SYNE1-203ENST00000354674 TFP02787 698 aa9.29□□□□□ -0.92
SYNE1-203ENST00000354674 CD8BP10966 210 aa9.29□□□□□ -0.92
SYNE1-203ENST00000354674 GPX2P18283 190 aa9.29□□□□□ -0.92
SYNE1-203ENST00000354674 IL1RNP18510 177 aa9.29□□□□□ -0.92
SYNE1-203ENST00000354674 GGT2P36268 569 aa9.29□□□□□ -0.92
SYNE1-203ENST00000354674 P2RY4P51582 365 aa9.29□□□□□ -0.92
SYNE1-203ENST00000354674 SSTP61278 116 aa9.29□□□□□ -0.92
SYNE1-203ENST00000354674 SNTB1Q13884 538 aaKnown RBP9.29□□□□□ -0.92
SYNE1-203ENST00000354674 HYAL4Q2M3T9 481 aa9.29□□□□□ -0.92
SYNE1-203ENST00000354674 BEND4Q6ZU67 534 aa9.29□□□□□ -0.92
SYNE1-203ENST00000354674 IZUMO1Q8IYV9 350 aa9.29□□□□□ -0.92
SYNE1-203ENST00000354674 CA13Q8N1Q1 262 aa9.29□□□□□ -0.92
SYNE1-203ENST00000354674 OR5P2Q8WZ92 322 aa9.29□□□□□ -0.92
SYNE1-203ENST00000354674 HRASLS5Q96KN8 279 aa9.29□□□□□ -0.92
SYNE1-203ENST00000354674 SUCNR1Q9BXA5 334 aa9.29□□□□□ -0.92
SYNE1-203ENST00000354674 ANKRD19PQ9H560 264 aa9.29□□□□□ -0.92
SYNE1-203ENST00000354674 ZNF282Q9UDV7 671 aaPredicted RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms