RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 RNF32Q9H0A6 362 aa9.55□□□□□ -0.88
SMPD4-201ENST00000351288 SLC25A18Q9H1K4 315 aa9.55□□□□□ -0.88
SMPD4-201ENST00000351288 EXTL2Q9UBQ6 330 aa9.55□□□□□ -0.88
SMPD4-201ENST00000351288 RARRES3Q9UL19 164 aa9.55□□□□□ -0.88
SMPD4-201ENST00000351288 TEX13CA0A0J9YWL9 993 aa9.54□□□□□ -0.88
SMPD4-201ENST00000351288 ALOX12BO75342 701 aa9.54□□□□□ -0.88
SMPD4-201ENST00000351288 IL1AP01583 271 aa9.54□□□□□ -0.88
SMPD4-201ENST00000351288 HLA-DPB1P04440 258 aa9.54□□□□□ -0.88
SMPD4-201ENST00000351288 SPARCP09486 303 aa9.54□□□□□ -0.88
SMPD4-201ENST00000351288 GP1BBP13224 206 aa9.54□□□□□ -0.88
SMPD4-201ENST00000351288 NME1P15531 152 aaKnown RBP9.54□□□□□ -0.88
SMPD4-201ENST00000351288 TACR3P29371 465 aa9.54□□□□□ -0.88
SMPD4-201ENST00000351288 CCR5P51681 352 aa9.54□□□□□ -0.88
SMPD4-201ENST00000351288 BTBD16Q32M84 506 aa9.54□□□□□ -0.88
SMPD4-201ENST00000351288 ARHGAP11BQ3KRB8 267 aa9.54□□□□□ -0.88
SMPD4-201ENST00000351288 GUSBP11Q6P575 273 aa9.54□□□□□ -0.88
SMPD4-201ENST00000351288 SLC35D2Q76EJ3 337 aa9.54□□□□□ -0.88
SMPD4-201ENST00000351288 ZNF676Q8N7Q3 588 aa9.54□□□□□ -0.88
SMPD4-201ENST00000351288 NAXEQ8NCW5 288 aa9.54□□□□□ -0.88
SMPD4-201ENST00000351288 TSEN15Q8WW01 171 aaKnown RBP9.54□□□□□ -0.88
SMPD4-201ENST00000351288 MESP1Q9BRJ9 268 aa9.54□□□□□ -0.88
SMPD4-201ENST00000351288 CCDC32Q9BV29 185 aa9.54□□□□□ -0.88
SMPD4-201ENST00000351288 OR11A1Q9GZK7 315 aa9.54□□□□□ -0.88
SMPD4-201ENST00000351288 MEPEQ9NQ76 525 aaPredicted RBP9.54□□□□□ -0.88
SMPD4-201ENST00000351288 TRIM36Q9NQ86 728 aa9.54□□□□□ -0.88
SMPD4-201ENST00000351288 IL20Q9NYY1 176 aa9.54□□□□□ -0.88
SMPD4-201ENST00000351288 SHISA8B8ZZ34 492 aa9.54□□□□□ -0.88
SMPD4-201ENST00000351288 LMO7DNF2Z398 122 aa9.54□□□□□ -0.88
SMPD4-201ENST00000351288 PIAS2O75928 621 aa9.54□□□□□ -0.88
SMPD4-201ENST00000351288 CBX7O95931 251 aa9.54□□□□□ -0.88
SMPD4-201ENST00000351288 UBL4AP11441 157 aa9.54□□□□□ -0.88
SMPD4-201ENST00000351288 GABRA5P31644 462 aa9.54□□□□□ -0.88
SMPD4-201ENST00000351288 ATP12AP54707 1039 aa9.54□□□□□ -0.88
SMPD4-201ENST00000351288 FOXK2Q01167 660 aa9.54□□□□□ -0.88
SMPD4-201ENST00000351288 TATDN3Q17R31 274 aa9.54□□□□□ -0.88
SMPD4-201ENST00000351288 SLC25A35Q3KQZ1 300 aa9.54□□□□□ -0.88
SMPD4-201ENST00000351288 Q5BKY6 102 aa9.54□□□□□ -0.88
SMPD4-201ENST00000351288 ZNF322Q6U7Q0 402 aaPredicted RBP9.54□□□□□ -0.88
SMPD4-201ENST00000351288 SERPINA12Q8IW75 414 aa9.54□□□□□ -0.88
SMPD4-201ENST00000351288 TMEM156Q8N614 296 aa9.54□□□□□ -0.88
SMPD4-201ENST00000351288 ATF6BQ99941 703 aa9.54□□□□□ -0.88
SMPD4-201ENST00000351288 GALNT9Q9HCQ5 603 aa9.54□□□□□ -0.88
SMPD4-201ENST00000351288 LYRM4Q9HD34 91 aa9.54□□□□□ -0.88
SMPD4-201ENST00000351288 PCNX1Q96RV3 2341 aa9.54□□□□□ -0.88
SMPD4-201ENST00000351288 TRBV2A0A0J9YWF9 115 aa9.54□□□□□ -0.88
SMPD4-201ENST00000351288 SCRG1O75711 98 aa9.54□□□□□ -0.88
SMPD4-201ENST00000351288 NGFRP08138 427 aa9.54□□□□□ -0.88
SMPD4-201ENST00000351288 TSFMP43897 325 aaKnown RBP9.54□□□□□ -0.88
SMPD4-201ENST00000351288 FZD5Q13467 585 aa9.54□□□□□ -0.88
SMPD4-201ENST00000351288 TPBGQ13641 420 aa9.54□□□□□ -0.88
SMPD4-201ENST00000351288 PRICKLE4Q2TBC4 344 aa9.54□□□□□ -0.88
SMPD4-201ENST00000351288 TRIM61Q5EBN2 209 aa9.54□□□□□ -0.88
SMPD4-201ENST00000351288 OR2L13Q8N349 312 aa9.54□□□□□ -0.88
SMPD4-201ENST00000351288 BMPERQ8N8U9 685 aa9.54□□□□□ -0.88
SMPD4-201ENST00000351288 OR5J2Q8NH18 312 aa9.54□□□□□ -0.88
SMPD4-201ENST00000351288 SLC22A4Q9H015 551 aa9.54□□□□□ -0.88
SMPD4-201ENST00000351288 DUSP22Q9NRW4 184 aa9.54□□□□□ -0.88
SMPD4-201ENST00000351288 RASD1Q9Y272 281 aa9.54□□□□□ -0.88
SMPD4-201ENST00000351288 AK6Q9Y3D8 172 aaKnown RBP9.54□□□□□ -0.88
SMPD4-201ENST00000351288 CDHR4A6H8M9 788 aa9.53□□□□□ -0.88
SMPD4-201ENST00000351288 SERINC4A6NH21 518 aa9.53□□□□□ -0.88
SMPD4-201ENST00000351288 CYR61O00622 381 aa9.53□□□□□ -0.88
SMPD4-201ENST00000351288 AKR7A2O43488 359 aa9.53□□□□□ -0.88
SMPD4-201ENST00000351288 GDF9O60383 454 aa9.53□□□□□ -0.88
SMPD4-201ENST00000351288 NDUFB2O95178 105 aa9.53□□□□□ -0.88
SMPD4-201ENST00000351288 EMP2P54851 167 aa9.53□□□□□ -0.88
SMPD4-201ENST00000351288 CLDN12P56749 244 aa9.53□□□□□ -0.88
SMPD4-201ENST00000351288 PLAURQ03405 335 aa9.53□□□□□ -0.88
SMPD4-201ENST00000351288 QPRTQ15274 297 aa9.53□□□□□ -0.88
SMPD4-201ENST00000351288 ZNF628Q5EBL2 1059 aa9.53□□□□□ -0.88
SMPD4-201ENST00000351288 ALKBH2Q6NS38 261 aa9.53□□□□□ -0.88
SMPD4-201ENST00000351288 ZNF595Q8IYB9 648 aa9.53□□□□□ -0.88
SMPD4-201ENST00000351288 BCORP1Q8N888 145 aa9.53□□□□□ -0.88
SMPD4-201ENST00000351288 BEST4Q8NFU0 473 aa9.53□□□□□ -0.88
SMPD4-201ENST00000351288 OR4D9Q8NGE8 314 aa9.53□□□□□ -0.88
SMPD4-201ENST00000351288 PCNPQ8WW12 178 aaKnown RBP9.53□□□□□ -0.88
SMPD4-201ENST00000351288 FRMD6Q96NE9 622 aa9.53□□□□□ -0.88
SMPD4-201ENST00000351288 NCDNQ9UBB6 729 aa9.53□□□□□ -0.88
SMPD4-201ENST00000351288 PILRAQ9UKJ1 303 aa9.53□□□□□ -0.88
SMPD4-201ENST00000351288 TMEM129A0AVI4 362 aa9.53□□□□□ -0.88
SMPD4-201ENST00000351288 KDM4EB2RXH2 506 aaPredicted RBP9.53□□□□□ -0.88
SMPD4-201ENST00000351288 EEF1E1O43324 174 aaKnown RBP9.53□□□□□ -0.88
SMPD4-201ENST00000351288 UTS2O95399 124 aa9.53□□□□□ -0.88
SMPD4-201ENST00000351288 MT-ND5P03915 603 aa9.53□□□□□ -0.88
SMPD4-201ENST00000351288 FPR3P25089 353 aa9.53□□□□□ -0.88
SMPD4-201ENST00000351288 UBE2IP63279 158 aaKnown RBP9.53□□□□□ -0.88
SMPD4-201ENST00000351288 PSG6Q00889 435 aa9.53□□□□□ -0.88
SMPD4-201ENST00000351288 ULK3Q6PHR2 472 aa9.53□□□□□ -0.88
SMPD4-201ENST00000351288 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.53□□□□□ -0.88
SMPD4-201ENST00000351288 CLDN22Q8N7P3 220 aa9.53□□□□□ -0.88
SMPD4-201ENST00000351288 POGLUT1Q8NBL1 392 aa9.53□□□□□ -0.88
SMPD4-201ENST00000351288 OR1L3Q8NH93 324 aa9.53□□□□□ -0.88
SMPD4-201ENST00000351288 MAFAQ8NHW3 353 aaPredicted RBP9.53□□□□□ -0.88
SMPD4-201ENST00000351288 GPR119Q8TDV5 335 aa9.53□□□□□ -0.88
SMPD4-201ENST00000351288 ZNRF4Q8WWF5 429 aa9.53□□□□□ -0.88
SMPD4-201ENST00000351288 NSMAFQ92636 917 aa9.53□□□□□ -0.88
SMPD4-201ENST00000351288 ANKRD9Q96BM1 317 aaPredicted RBP9.53□□□□□ -0.88
SMPD4-201ENST00000351288 LPAR4Q99677 370 aa9.53□□□□□ -0.88
SMPD4-201ENST00000351288 PDCD1LG2Q9BQ51 273 aa9.53□□□□□ -0.88
SMPD4-201ENST00000351288 DEFB126Q9BYW3 111 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms