RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 CA5AP35218 305 aa11.22□□□□□ -0.61
SMAD9-201ENST00000350148 APOBEC1P41238 236 aaKnown RBP11.22□□□□□ -0.61
SMAD9-201ENST00000350148 ALDH3B2P48448 385 aa11.22□□□□□ -0.61
SMAD9-201ENST00000350148 HOXC5Q00444 222 aa11.22□□□□□ -0.61
SMAD9-201ENST00000350148 ADPRMQ3LIE5 342 aa11.22□□□□□ -0.61
SMAD9-201ENST00000350148 MRM1Q6IN84 353 aaKnown RBP11.22□□□□□ -0.61
SMAD9-201ENST00000350148 ENTHD1Q8IYW4 607 aa11.22□□□□□ -0.61
SMAD9-201ENST00000350148 MMP21Q8N119 569 aa11.22□□□□□ -0.61
SMAD9-201ENST00000350148 BCORP1Q8N888 145 aa11.22□□□□□ -0.61
SMAD9-201ENST00000350148 OR5W2Q8NH69 310 aa11.22□□□□□ -0.61
SMAD9-201ENST00000350148 NANOS1Q8WY41 292 aaKnown RBP11.22□□□□□ -0.61
SMAD9-201ENST00000350148 SARGQ9BW04 601 aa11.22□□□□□ -0.61
SMAD9-201ENST00000350148 IGHV1OR21-1A0A087WYE8 117 aa11.22□□□□□ -0.61
SMAD9-201ENST00000350148 BCAS1O75363 584 aaPredicted RBP11.22□□□□□ -0.61
SMAD9-201ENST00000350148 IFI6P09912 130 aa11.22□□□□□ -0.61
SMAD9-201ENST00000350148 EIF3IQ13347 325 aaKnown RBP11.22□□□□□ -0.61
SMAD9-201ENST00000350148 TOMM5Q8N4H5 51 aa11.22□□□□□ -0.61
SMAD9-201ENST00000350148 SCARF2Q96GP6 870 aaPredicted RBP11.22□□□□□ -0.61
SMAD9-201ENST00000350148 ARHGDIGQ99819 225 aa11.22□□□□□ -0.61
SMAD9-201ENST00000350148 C7orf50Q9BRJ6 194 aaKnown RBP11.22□□□□□ -0.61
SMAD9-201ENST00000350148 TCEAL2Q9H3H9 227 aaPredicted RBP11.22□□□□□ -0.61
SMAD9-201ENST00000350148 BABAM2Q9NXR7 383 aa11.22□□□□□ -0.61
SMAD9-201ENST00000350148 ALKBH4Q9NXW9 302 aa11.22□□□□□ -0.61
SMAD9-201ENST00000350148 EIF1BO60739 113 aaKnown RBP11.22□□□□□ -0.61
SMAD9-201ENST00000350148 B3GALT4O96024 378 aa11.22□□□□□ -0.61
SMAD9-201ENST00000350148 LCKP06239 509 aa11.22□□□□□ -0.61
SMAD9-201ENST00000350148 OR2T7P0C7T2 308 aa11.22□□□□□ -0.61
SMAD9-201ENST00000350148 PTNP21246 168 aa11.22□□□□□ -0.61
SMAD9-201ENST00000350148 HTR2AP28223 471 aa11.22□□□□□ -0.61
SMAD9-201ENST00000350148 ERVK-25P63136 954 aa11.22□□□□□ -0.61
SMAD9-201ENST00000350148 SGCAQ16586 387 aa11.22□□□□□ -0.61
SMAD9-201ENST00000350148 EMC4Q5J8M3 183 aa11.22□□□□□ -0.61
SMAD9-201ENST00000350148 CLDN22Q8N7P3 220 aa11.22□□□□□ -0.61
SMAD9-201ENST00000350148 OR2T27Q8NH04 317 aa11.22□□□□□ -0.61
SMAD9-201ENST00000350148 STT3BQ8TCJ2 826 aa11.22□□□□□ -0.61
SMAD9-201ENST00000350148 PITX2Q99697 317 aa11.22□□□□□ -0.61
SMAD9-201ENST00000350148 FXYD6-FXYD2A0A087WZ82 144 aa11.22□□□□□ -0.61
SMAD9-201ENST00000350148 TMED7-TICAM2A0A0A6YYA0 188 aa11.22□□□□□ -0.61
SMAD9-201ENST00000350148 FTCDNL1E5RQL4 147 aa11.22□□□□□ -0.61
SMAD9-201ENST00000350148 NUPL2O15504 423 aaKnown RBP11.22□□□□□ -0.61
SMAD9-201ENST00000350148 RP2O75695 350 aa11.22□□□□□ -0.61
SMAD9-201ENST00000350148 NKX2-2O95096 273 aa11.22□□□□□ -0.61
SMAD9-201ENST00000350148 DRD5P21918 477 aa11.22□□□□□ -0.61
SMAD9-201ENST00000350148 NCS1P62166 190 aa11.22□□□□□ -0.61
SMAD9-201ENST00000350148 ZNF628Q5EBL2 1059 aa11.22□□□□□ -0.61
SMAD9-201ENST00000350148 ZNF793Q6ZN11 406 aa11.22□□□□□ -0.61
SMAD9-201ENST00000350148 WDR5BQ86VZ2 330 aa11.22□□□□□ -0.61
SMAD9-201ENST00000350148 FAM26EQ8N5C1 309 aa11.22□□□□□ -0.61
SMAD9-201ENST00000350148 ZNF417Q8TAU3 575 aa11.22□□□□□ -0.61
SMAD9-201ENST00000350148 NEK7Q8TDX7 302 aa11.22□□□□□ -0.61
SMAD9-201ENST00000350148 PHYHIPQ92561 330 aa11.22□□□□□ -0.61
SMAD9-201ENST00000350148 TTC9Q92623 222 aa11.22□□□□□ -0.61
SMAD9-201ENST00000350148 C3orf49Q96BT1 292 aa11.22□□□□□ -0.61
SMAD9-201ENST00000350148 OR5B2Q96R09 309 aa11.22□□□□□ -0.61
SMAD9-201ENST00000350148 TMEM121BQ9BXQ6 578 aaPredicted RBP11.22□□□□□ -0.61
SMAD9-201ENST00000350148 FXYD6Q9H0Q3 95 aa11.22□□□□□ -0.61
SMAD9-201ENST00000350148 DPAGT1Q9H3H5 408 aa11.22□□□□□ -0.61
SMAD9-201ENST00000350148 TMED7Q9Y3B3 224 aa11.22□□□□□ -0.61
SMAD9-201ENST00000350148 UCHL1P09936 223 aa11.21□□□□□ -0.61
SMAD9-201ENST00000350148 CD46P15529 392 aa11.21□□□□□ -0.61
SMAD9-201ENST00000350148 PNLIPP16233 465 aa11.21□□□□□ -0.61
SMAD9-201ENST00000350148 GFERP55789 205 aa11.21□□□□□ -0.61
SMAD9-201ENST00000350148 CTBP2P56545 445 aa11.21□□□□□ -0.61
SMAD9-201ENST00000350148 C22orf42Q6IC83 251 aa11.21□□□□□ -0.61
SMAD9-201ENST00000350148 SHISA6Q6ZSJ9 500 aa11.21□□□□□ -0.61
SMAD9-201ENST00000350148 PRSS42Q7Z5A4 293 aa11.21□□□□□ -0.61
SMAD9-201ENST00000350148 TPRA1Q86W33 373 aa11.21□□□□□ -0.61
SMAD9-201ENST00000350148 GRAMD2AQ8IUY3 354 aa11.21□□□□□ -0.61
SMAD9-201ENST00000350148 C1orf210Q8IVY1 113 aa11.21□□□□□ -0.61
SMAD9-201ENST00000350148 OR5AK2Q8NH90 309 aa11.21□□□□□ -0.61
SMAD9-201ENST00000350148 ST8SIA1Q92185 356 aa11.21□□□□□ -0.61
SMAD9-201ENST00000350148 ZNF582Q96NG8 517 aaPredicted RBP11.21□□□□□ -0.61
SMAD9-201ENST00000350148 RANBP3Q9H6Z4 567 aaPredicted RBP11.21□□□□□ -0.61
SMAD9-201ENST00000350148 MCTS1Q9ULC4 181 aaKnown RBP11.21□□□□□ -0.61
SMAD9-201ENST00000350148 A0A1W2PPV9 198 aa11.21□□□□□ -0.61
SMAD9-201ENST00000350148 IL33O95760 270 aa11.21□□□□□ -0.61
SMAD9-201ENST00000350148 MBP02144 154 aa11.21□□□□□ -0.61
SMAD9-201ENST00000350148 CYC1P08574 325 aa11.21□□□□□ -0.61
SMAD9-201ENST00000350148 ISL1P61371 349 aa11.21□□□□□ -0.61
SMAD9-201ENST00000350148 ARL6IP1Q15041 203 aa11.21□□□□□ -0.61
SMAD9-201ENST00000350148 WDR74Q6RFH5 385 aaPredicted RBP11.21□□□□□ -0.61
SMAD9-201ENST00000350148 VN1R4Q7Z5H5 301 aa11.21□□□□□ -0.61
SMAD9-201ENST00000350148 CPEB2Q7Z5Q1 589 aaKnown RBP11.21□□□□□ -0.61
SMAD9-201ENST00000350148 OR13F1Q8NGS4 319 aa11.21□□□□□ -0.61
SMAD9-201ENST00000350148 NPFFR2Q9Y5X5 522 aa11.21□□□□□ -0.61
SMAD9-201ENST00000350148 GOLGA4Q13439 2230 aaKnown RBP11.21□□□□□ -0.61
SMAD9-201ENST00000350148 ARHGAP33O14559 1287 aa11.21□□□□□ -0.62
SMAD9-201ENST00000350148 IL1AP01583 271 aa11.21□□□□□ -0.62
SMAD9-201ENST00000350148 IGHG1P01857 330 aa11.21□□□□□ -0.62
SMAD9-201ENST00000350148 EVI2BP34910 448 aa11.21□□□□□ -0.62
SMAD9-201ENST00000350148 FRKP42685 505 aaPredicted RBP11.21□□□□□ -0.62
SMAD9-201ENST00000350148 OR7A5Q15622 319 aa11.21□□□□□ -0.62
SMAD9-201ENST00000350148 COL13A1Q5TAT6 717 aaPredicted RBP11.21□□□□□ -0.62
SMAD9-201ENST00000350148 JAGN1Q8N5M9 183 aa11.21□□□□□ -0.62
SMAD9-201ENST00000350148 OR4D9Q8NGE8 314 aa11.21□□□□□ -0.62
SMAD9-201ENST00000350148 OR1J4Q8NGS1 313 aa11.21□□□□□ -0.62
SMAD9-201ENST00000350148 OR52N1Q8NH53 320 aa11.21□□□□□ -0.62
SMAD9-201ENST00000350148 DEDD2Q8WXF8 326 aa11.21□□□□□ -0.62
SMAD9-201ENST00000350148 CCDC74BQ96LY2 380 aa11.21□□□□□ -0.62
SMAD9-201ENST00000350148 ZFP3Q96NJ6 502 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms