RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 CDK5Q00535 292 aa9.83□□□□□ -0.84
CAPN3-203ENST00000349748 PTSQ03393 145 aa9.83□□□□□ -0.84
CAPN3-203ENST00000349748 TDGQ13569 410 aa9.83□□□□□ -0.84
CAPN3-203ENST00000349748 DCAF4L1Q3SXM0 396 aa9.83□□□□□ -0.84
CAPN3-203ENST00000349748 OR2A2Q6IF42 318 aa9.83□□□□□ -0.84
CAPN3-203ENST00000349748 ETFRF1Q6IPR1 90 aa9.83□□□□□ -0.84
CAPN3-203ENST00000349748 FBXO46Q6PJ61 603 aaPredicted RBP9.83□□□□□ -0.84
CAPN3-203ENST00000349748 IQCHQ86VS3 1027 aa9.83□□□□□ -0.84
CAPN3-203ENST00000349748 POGLUT1Q8NBL1 392 aa9.83□□□□□ -0.84
CAPN3-203ENST00000349748 SVIPQ8NHG7 77 aa9.83□□□□□ -0.84
CAPN3-203ENST00000349748 ABHD4Q8TB40 342 aa9.83□□□□□ -0.84
CAPN3-203ENST00000349748 BRIX1Q8TDN6 353 aaKnown RBP9.83□□□□□ -0.84
CAPN3-203ENST00000349748 ST7LQ8TDW4 575 aa9.83□□□□□ -0.84
CAPN3-203ENST00000349748 KCTD13Q8WZ19 329 aa9.83□□□□□ -0.84
CAPN3-203ENST00000349748 MAFIPQ8WZ33 124 aa9.83□□□□□ -0.84
CAPN3-203ENST00000349748 THOC3Q96J01 351 aaKnown RBP9.83□□□□□ -0.84
CAPN3-203ENST00000349748 TAAR9Q96RI9 348 aa9.83□□□□□ -0.84
CAPN3-203ENST00000349748 TMEM208Q9BTX3 173 aa9.83□□□□□ -0.84
CAPN3-203ENST00000349748 TWSG1Q9GZX9 223 aa9.83□□□□□ -0.84
CAPN3-203ENST00000349748 CCDC86Q9H6F5 360 aaKnown RBP9.83□□□□□ -0.84
CAPN3-203ENST00000349748 NLE1Q9NVX2 485 aaPredicted RBP9.83□□□□□ -0.84
CAPN3-203ENST00000349748 CACFD1Q9UGQ2 172 aa9.83□□□□□ -0.84
CAPN3-203ENST00000349748 CORO2BQ9UQ03 480 aa9.83□□□□□ -0.84
CAPN3-203ENST00000349748 TMEM184BQ9Y519 407 aaPredicted RBP9.83□□□□□ -0.84
CAPN3-203ENST00000349748 A0A1W2PPE2 198 aa9.82□□□□□ -0.84
CAPN3-203ENST00000349748 ANKRD20A5PA0PJZ0 165 aa9.82□□□□□ -0.84
CAPN3-203ENST00000349748 IRGMA1A4Y4 181 aa9.82□□□□□ -0.84
CAPN3-203ENST00000349748 A8MWP6 167 aa9.82□□□□□ -0.84
CAPN3-203ENST00000349748 CTDSPLO15194 276 aa9.82□□□□□ -0.84
CAPN3-203ENST00000349748 STK16O75716 305 aa9.82□□□□□ -0.84
CAPN3-203ENST00000349748 ITGA5P08648 1049 aa9.82□□□□□ -0.84
CAPN3-203ENST00000349748 SMIM10L2AP0DMW4 78 aa9.82□□□□□ -0.84
CAPN3-203ENST00000349748 SMIM10L2BP0DMW5 78 aa9.82□□□□□ -0.84
CAPN3-203ENST00000349748 CASRP41180 1078 aa9.82□□□□□ -0.84
CAPN3-203ENST00000349748 RGS19P49795 217 aa9.82□□□□□ -0.84
CAPN3-203ENST00000349748 PSEN2P49810 448 aa9.82□□□□□ -0.84
CAPN3-203ENST00000349748 ZNF574Q6ZN55 896 aaPredicted RBP9.82□□□□□ -0.84
CAPN3-203ENST00000349748 TMPRSS11FQ6ZWK6 438 aa9.82□□□□□ -0.84
CAPN3-203ENST00000349748 GLT6D1Q7Z4J2 308 aa9.82□□□□□ -0.84
CAPN3-203ENST00000349748 C5orf24Q7Z6I8 188 aa9.82□□□□□ -0.84
CAPN3-203ENST00000349748 LKAAEAR1Q8TD35 194 aa9.82□□□□□ -0.84
CAPN3-203ENST00000349748 FCAMRQ8WWV6 532 aa9.82□□□□□ -0.84
CAPN3-203ENST00000349748 LRFN5Q96NI6 719 aa9.82□□□□□ -0.84
CAPN3-203ENST00000349748 PDCD11Q14690 1871 aaKnown RBP9.82□□□□□ -0.84
CAPN3-203ENST00000349748 NYNRINQ9P2P1 1898 aaKnown RBP9.82□□□□□ -0.84
CAPN3-203ENST00000349748 DRGXA6NNA5 263 aa9.82□□□□□ -0.84
CAPN3-203ENST00000349748 GABARAPH6UMI1 98 aa9.82□□□□□ -0.84
CAPN3-203ENST00000349748 M0R036 132 aa9.82□□□□□ -0.84
CAPN3-203ENST00000349748 CCSO14618 274 aa9.82□□□□□ -0.84
CAPN3-203ENST00000349748 UGDHO60701 494 aa9.82□□□□□ -0.84
CAPN3-203ENST00000349748 OR2F2O95006 317 aa9.82□□□□□ -0.84
CAPN3-203ENST00000349748 NTN1O95631 604 aa9.82□□□□□ -0.84
CAPN3-203ENST00000349748 FGF1P05230 155 aa9.82□□□□□ -0.84
CAPN3-203ENST00000349748 ACP5P13686 325 aa9.82□□□□□ -0.84
CAPN3-203ENST00000349748 AGTR1P30556 359 aa9.82□□□□□ -0.84
CAPN3-203ENST00000349748 PMELP40967 661 aa9.82□□□□□ -0.84
CAPN3-203ENST00000349748 MNDAP41218 407 aa9.82□□□□□ -0.84
CAPN3-203ENST00000349748 TWF1Q12792 350 aa9.82□□□□□ -0.84
CAPN3-203ENST00000349748 OR2F1Q13607 317 aa9.82□□□□□ -0.84
CAPN3-203ENST00000349748 ZNF234Q14588 700 aa9.82□□□□□ -0.84
CAPN3-203ENST00000349748 SLC9A5Q14940 896 aa9.82□□□□□ -0.84
CAPN3-203ENST00000349748 KHDC3LQ587J8 217 aa9.82□□□□□ -0.84
CAPN3-203ENST00000349748 ARTNQ5T4W7 220 aa9.82□□□□□ -0.84
CAPN3-203ENST00000349748 WSCD1Q658N2 575 aa9.82□□□□□ -0.84
CAPN3-203ENST00000349748 TRIM40Q6P9F5 258 aa9.82□□□□□ -0.84
CAPN3-203ENST00000349748 CLEC2AQ6UVW9 174 aa9.82□□□□□ -0.84
CAPN3-203ENST00000349748 CXXC5Q7LFL8 322 aaKnown RBP9.82□□□□□ -0.84
CAPN3-203ENST00000349748 BHLHA9Q7RTU4 235 aa9.82□□□□□ -0.84
CAPN3-203ENST00000349748 GPR32P1Q8NGA4 272 aa9.82□□□□□ -0.84
CAPN3-203ENST00000349748 CSGALNACT1Q8TDX6 532 aa9.82□□□□□ -0.84
CAPN3-203ENST00000349748 MVB12AQ96EY5 273 aa9.82□□□□□ -0.84
CAPN3-203ENST00000349748 HSPA12BQ96MM6 686 aa9.82□□□□□ -0.84
CAPN3-203ENST00000349748 MTERF1Q99551 399 aaKnown RBP9.82□□□□□ -0.84
CAPN3-203ENST00000349748 SMOQ99835 787 aa9.82□□□□□ -0.84
CAPN3-203ENST00000349748 UTP23Q9BRU9 249 aaKnown RBP9.82□□□□□ -0.84
CAPN3-203ENST00000349748 WRAP53Q9BUR4 548 aaKnown RBP9.82□□□□□ -0.84
CAPN3-203ENST00000349748 A6NNC1 897 aa9.81□□□□□ -0.84
CAPN3-203ENST00000349748 SOCS6O14544 535 aa9.81□□□□□ -0.84
CAPN3-203ENST00000349748 ASGR1P07306 291 aa9.81□□□□□ -0.84
CAPN3-203ENST00000349748 FOSL2P15408 326 aa9.81□□□□□ -0.84
CAPN3-203ENST00000349748 PPIBP23284 216 aaKnown RBP9.81□□□□□ -0.84
CAPN3-203ENST00000349748 CD1CP29017 333 aa9.81□□□□□ -0.84
CAPN3-203ENST00000349748 RBM34P42696 430 aaKnown RBP9.81□□□□□ -0.84
CAPN3-203ENST00000349748 CLDN12P56749 244 aa9.81□□□□□ -0.84
CAPN3-203ENST00000349748 LILRA4P59901 499 aa9.81□□□□□ -0.84
CAPN3-203ENST00000349748 RPS15P62841 145 aaKnown RBP9.81□□□□□ -0.84
CAPN3-203ENST00000349748 RPS26P62854 115 aaKnown RBP9.81□□□□□ -0.84
CAPN3-203ENST00000349748 ACSM1Q08AH1 577 aa9.81□□□□□ -0.84
CAPN3-203ENST00000349748 NDUFA9Q16795 377 aa9.81□□□□□ -0.84
CAPN3-203ENST00000349748 SAPCD1Q5SSQ6 148 aa9.81□□□□□ -0.84
CAPN3-203ENST00000349748 OLFML2AQ68BL7 652 aa9.81□□□□□ -0.84
CAPN3-203ENST00000349748 PRSS55Q6UWB4 352 aaPredicted RBP9.81□□□□□ -0.84
CAPN3-203ENST00000349748 ABHD13Q7L211 337 aa9.81□□□□□ -0.84
CAPN3-203ENST00000349748 HMGN2P46Q86SG4 172 aa9.81□□□□□ -0.84
CAPN3-203ENST00000349748 OR4K5Q8NGD3 323 aa9.81□□□□□ -0.84
CAPN3-203ENST00000349748 OR5W2Q8NH69 310 aa9.81□□□□□ -0.84
CAPN3-203ENST00000349748 DNAJB3Q8WWF6 145 aa9.81□□□□□ -0.84
CAPN3-203ENST00000349748 PHYHIPQ92561 330 aa9.81□□□□□ -0.84
CAPN3-203ENST00000349748 CIPCQ9C0C6 399 aa9.81□□□□□ -0.84
CAPN3-203ENST00000349748 PLEKHA1Q9HB21 404 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms