RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 METTL7AQ9H8H3 244 aa11.27□□□□□ -0.6
COL12A1-202ENST00000345356 SLC22A11Q9NSA0 550 aa11.27□□□□□ -0.6
COL12A1-202ENST00000345356 SCML1Q9UN30 329 aa11.27□□□□□ -0.6
COL12A1-202ENST00000345356 CHST2Q9Y4C5 530 aa11.27□□□□□ -0.6
COL12A1-202ENST00000345356 NPIPB15A6NHN6 443 aaPredicted RBP11.27□□□□□ -0.6
COL12A1-202ENST00000345356 NFKBIEO00221 500 aa11.27□□□□□ -0.6
COL12A1-202ENST00000345356 ADH5P11766 374 aa11.27□□□□□ -0.6
COL12A1-202ENST00000345356 PGCP20142 388 aa11.27□□□□□ -0.6
COL12A1-202ENST00000345356 FABP5Q01469 135 aa11.27□□□□□ -0.6
COL12A1-202ENST00000345356 SGCBQ16585 318 aa11.27□□□□□ -0.6
COL12A1-202ENST00000345356 FIP1L1Q6UN15 594 aaKnown RBP11.27□□□□□ -0.6
COL12A1-202ENST00000345356 CMTM1Q8IZ96 169 aa11.27□□□□□ -0.6
COL12A1-202ENST00000345356 METTL27Q8N6F8 245 aaPredicted RBP11.27□□□□□ -0.6
COL12A1-202ENST00000345356 TMEM106AQ96A25 262 aa11.27□□□□□ -0.6
COL12A1-202ENST00000345356 SORCS2Q96PQ0 1159 aa11.27□□□□□ -0.6
COL12A1-202ENST00000345356 C1orf123Q9NWV4 160 aa11.27□□□□□ -0.6
COL12A1-202ENST00000345356 GAR1Q9NY12 217 aaKnown RBP11.27□□□□□ -0.6
COL12A1-202ENST00000345356 ARFGEF2Q9Y6D5 1785 aa11.27□□□□□ -0.61
COL12A1-202ENST00000345356 RGS11O94810 467 aa11.27□□□□□ -0.61
COL12A1-202ENST00000345356 IMPA1P29218 277 aa11.27□□□□□ -0.61
COL12A1-202ENST00000345356 ZNF239Q16600 458 aaKnown RBP11.27□□□□□ -0.61
COL12A1-202ENST00000345356 SLC22A6Q4U2R8 563 aa11.27□□□□□ -0.61
COL12A1-202ENST00000345356 TMEM81Q6P7N7 255 aa11.27□□□□□ -0.61
COL12A1-202ENST00000345356 SBSNQ6UWP8 590 aa11.27□□□□□ -0.61
COL12A1-202ENST00000345356 MED18Q9BUE0 208 aa11.27□□□□□ -0.61
COL12A1-202ENST00000345356 SERTAD4Q9NUC0 356 aa11.27□□□□□ -0.61
COL12A1-202ENST00000345356 CYB5R1Q9UHQ9 305 aa11.27□□□□□ -0.61
COL12A1-202ENST00000345356 CBY3A6NI87 242 aa11.27□□□□□ -0.61
COL12A1-202ENST00000345356 TMEM200CA6NKL6 621 aa11.27□□□□□ -0.61
COL12A1-202ENST00000345356 VEGFDO43915 354 aa11.27□□□□□ -0.61
COL12A1-202ENST00000345356 SCAF4O95104 1147 aaKnown RBP11.27□□□□□ -0.61
COL12A1-202ENST00000345356 HEXBP07686 556 aa11.27□□□□□ -0.61
COL12A1-202ENST00000345356 IGFBP1P08833 259 aaPredicted RBP11.27□□□□□ -0.61
COL12A1-202ENST00000345356 SRMP19623 302 aa11.27□□□□□ -0.61
COL12A1-202ENST00000345356 FLT3LGP49771 235 aa11.27□□□□□ -0.61
COL12A1-202ENST00000345356 KCNJ10P78508 379 aa11.27□□□□□ -0.61
COL12A1-202ENST00000345356 TLE4Q04727 773 aa11.27□□□□□ -0.61
COL12A1-202ENST00000345356 GDF6Q6KF10 455 aaPredicted RBP11.27□□□□□ -0.61
COL12A1-202ENST00000345356 SLC16A13Q7RTY0 426 aa11.27□□□□□ -0.61
COL12A1-202ENST00000345356 SCD5Q86SK9 330 aa11.27□□□□□ -0.61
COL12A1-202ENST00000345356 HRASLSQ9HDD0 168 aa11.27□□□□□ -0.61
COL12A1-202ENST00000345356 WNT6Q9Y6F9 365 aa11.27□□□□□ -0.61
COL12A1-202ENST00000345356 IFT172Q9UG01 1749 aa11.27□□□□□ -0.61
COL12A1-202ENST00000345356 A0A1B0GUH1 482 aa11.27□□□□□ -0.61
COL12A1-202ENST00000345356 B4DGG1 531 aa11.27□□□□□ -0.61
COL12A1-202ENST00000345356 SERPINE2P07093 398 aa11.27□□□□□ -0.61
COL12A1-202ENST00000345356 MGMTP16455 207 aa11.27□□□□□ -0.61
COL12A1-202ENST00000345356 IL1RNP18510 177 aa11.27□□□□□ -0.61
COL12A1-202ENST00000345356 CSF2RBP32927 897 aa11.27□□□□□ -0.61
COL12A1-202ENST00000345356 BAMBIQ13145 260 aa11.27□□□□□ -0.61
COL12A1-202ENST00000345356 MDGA2Q7Z553 956 aa11.27□□□□□ -0.61
COL12A1-202ENST00000345356 CBARPQ8N350 705 aaPredicted RBP11.27□□□□□ -0.61
COL12A1-202ENST00000345356 OR5D14Q8NGL3 314 aa11.27□□□□□ -0.61
COL12A1-202ENST00000345356 OR5M8Q8NGP6 311 aa11.27□□□□□ -0.61
COL12A1-202ENST00000345356 ELOVL3Q9HB03 270 aa11.27□□□□□ -0.61
COL12A1-202ENST00000345356 ACER3Q9NUN7 267 aa11.27□□□□□ -0.61
COL12A1-202ENST00000345356 SLC25A37Q9NYZ2 338 aa11.27□□□□□ -0.61
COL12A1-202ENST00000345356 PHRF1Q9P1Y6 1649 aaKnown RBP11.26□□□□□ -0.61
COL12A1-202ENST00000345356 PHOX2AO14813 284 aa11.26□□□□□ -0.61
COL12A1-202ENST00000345356 MMP11P24347 488 aa11.26□□□□□ -0.61
COL12A1-202ENST00000345356 HOXA11P31270 313 aaPredicted RBP11.26□□□□□ -0.61
COL12A1-202ENST00000345356 CRHR2Q13324 411 aa11.26□□□□□ -0.61
COL12A1-202ENST00000345356 TMEM244Q5VVB8 128 aa11.26□□□□□ -0.61
COL12A1-202ENST00000345356 FAAP20Q6NZ36 180 aa11.26□□□□□ -0.61
COL12A1-202ENST00000345356 CDRT4Q8N9R6 151 aa11.26□□□□□ -0.61
COL12A1-202ENST00000345356 ASB11Q8WXH4 323 aa11.26□□□□□ -0.61
COL12A1-202ENST00000345356 RSC1A1Q92681 617 aa11.26□□□□□ -0.61
COL12A1-202ENST00000345356 RBMXL1Q96E39 390 aaKnown RBP11.26□□□□□ -0.61
COL12A1-202ENST00000345356 ZNF681Q96N22 645 aa11.26□□□□□ -0.61
COL12A1-202ENST00000345356 SUCNR1Q9BXA5 334 aa11.26□□□□□ -0.61
COL12A1-202ENST00000345356 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.26□□□□□ -0.61
COL12A1-202ENST00000345356 CSAG2Q9Y5P2 127 aa11.26□□□□□ -0.61
COL12A1-202ENST00000345356 IGKV6D-21A0A0A0MT36 114 aa11.26□□□□□ -0.61
COL12A1-202ENST00000345356 OR6C76A6NM76 312 aa11.26□□□□□ -0.61
COL12A1-202ENST00000345356 M0R082 166 aa11.26□□□□□ -0.61
COL12A1-202ENST00000345356 LEFTY2O00292 366 aa11.26□□□□□ -0.61
COL12A1-202ENST00000345356 BRINP1O60477 761 aa11.26□□□□□ -0.61
COL12A1-202ENST00000345356 GALTP07902 379 aa11.26□□□□□ -0.61
COL12A1-202ENST00000345356 HTR2CP28335 458 aa11.26□□□□□ -0.61
COL12A1-202ENST00000345356 HOXC12P31275 282 aa11.26□□□□□ -0.61
COL12A1-202ENST00000345356 XCR1P46094 333 aa11.26□□□□□ -0.61
COL12A1-202ENST00000345356 GPR18Q14330 331 aa11.26□□□□□ -0.61
COL12A1-202ENST00000345356 C21orf62-AS1Q17RA5 79 aa11.26□□□□□ -0.61
COL12A1-202ENST00000345356 RHOUQ7L0Q8 258 aa11.26□□□□□ -0.61
COL12A1-202ENST00000345356 OR51D1Q8NGF3 324 aa11.26□□□□□ -0.61
COL12A1-202ENST00000345356 OR51Q1Q8NH59 317 aa11.26□□□□□ -0.61
COL12A1-202ENST00000345356 SDSLQ96GA7 329 aa11.26□□□□□ -0.61
COL12A1-202ENST00000345356 EXOSC3Q9NQT5 275 aaKnown RBP11.26□□□□□ -0.61
COL12A1-202ENST00000345356 MYH9P35579 1960 aaKnown RBP11.26□□□□□ -0.61
COL12A1-202ENST00000345356 ZAR1LA6NP61 321 aa11.26□□□□□ -0.61
COL12A1-202ENST00000345356 OR2T1O43869 369 aa11.26□□□□□ -0.61
COL12A1-202ENST00000345356 MAP2K6P52564 334 aa11.26□□□□□ -0.61
COL12A1-202ENST00000345356 RPS15AP62244 130 aaKnown RBP11.26□□□□□ -0.61
COL12A1-202ENST00000345356 PDE7AQ13946 482 aa11.26□□□□□ -0.61
COL12A1-202ENST00000345356 CCNJQ5T5M9 372 aa11.26□□□□□ -0.61
COL12A1-202ENST00000345356 CHTF18Q8WVB6 975 aa11.26□□□□□ -0.61
COL12A1-202ENST00000345356 TRMT2BQ96GJ1 504 aaKnown RBP11.26□□□□□ -0.61
COL12A1-202ENST00000345356 SENP5Q96HI0 755 aaPredicted RBP11.26□□□□□ -0.61
COL12A1-202ENST00000345356 SLC41A2Q96JW4 573 aa11.26□□□□□ -0.61
COL12A1-202ENST00000345356 CWH43Q9H720 699 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms