RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 SLC5A7Q9GZV3 580 aa15.13■□□□□ 0.01
SMARCA4-201ENST00000344626 KLHL9Q9P2J3 617 aa15.13■□□□□ 0.01
SMARCA4-201ENST00000344626 RAB3AP20336 220 aa15.12■□□□□ 0.01
SMARCA4-201ENST00000344626 WNT4P56705 351 aa15.12■□□□□ 0.01
SMARCA4-201ENST00000344626 PWWP2BQ6NUJ5 590 aa15.12■□□□□ 0.01
SMARCA4-201ENST00000344626 BCORP1Q8N888 145 aa15.12■□□□□ 0.01
SMARCA4-201ENST00000344626 FBXO27Q8NI29 283 aa15.12■□□□□ 0.01
SMARCA4-201ENST00000344626 ZNF583Q96ND8 569 aa15.12■□□□□ 0.01
SMARCA4-201ENST00000344626 MNTQ99583 582 aa15.12■□□□□ 0.01
SMARCA4-201ENST00000344626 PRR33A8MZF0 331 aa15.12■□□□□ 0.01
SMARCA4-201ENST00000344626 DIRAS3O95661 229 aa15.12■□□□□ 0.01
SMARCA4-201ENST00000344626 RBM34P42696 430 aaKnown RBP15.12■□□□□ 0.01
SMARCA4-201ENST00000344626 SNU13P55769 128 aaKnown RBP15.12■□□□□ 0.01
SMARCA4-201ENST00000344626 TMEM69Q5SWH9 247 aa15.12■□□□□ 0.01
SMARCA4-201ENST00000344626 TCTN3Q6NUS6 607 aa15.12■□□□□ 0.01
SMARCA4-201ENST00000344626 ZNF836Q6ZNA1 936 aa15.12■□□□□ 0.01
SMARCA4-201ENST00000344626 KCTD20Q7Z5Y7 419 aa15.12■□□□□ 0.01
SMARCA4-201ENST00000344626 TRAPPC6BQ86SZ2 158 aa15.12■□□□□ 0.01
SMARCA4-201ENST00000344626 DNAAF1Q8NEP3 725 aa15.12■□□□□ 0.01
SMARCA4-201ENST00000344626 OR5M1Q8NGP8 315 aa15.12■□□□□ 0.01
SMARCA4-201ENST00000344626 COX14Q96I36 57 aa15.12■□□□□ 0.01
SMARCA4-201ENST00000344626 MGAT4AQ9UM21 535 aa15.12■□□□□ 0.01
SMARCA4-201ENST00000344626 ABCG2Q9UNQ0 655 aa15.12■□□□□ 0.01
SMARCA4-201ENST00000344626 SPINT1O43278 529 aa15.12■□□□□ 0.01
SMARCA4-201ENST00000344626 RBBP9O75884 186 aa15.12■□□□□ 0.01
SMARCA4-201ENST00000344626 T-ENOLP0DO92 83 aa15.12■□□□□ 0.01
SMARCA4-201ENST00000344626 CFL1P23528 166 aaKnown RBP15.12■□□□□ 0.01
SMARCA4-201ENST00000344626 RETREG3Q86VR2 466 aa15.12■□□□□ 0.01
SMARCA4-201ENST00000344626 OR5J2Q8NH18 312 aa15.12■□□□□ 0.01
SMARCA4-201ENST00000344626 ZNF417Q8TAU3 575 aa15.12■□□□□ 0.01
SMARCA4-201ENST00000344626 ENAMQ9NRM1 1142 aa15.12■□□□□ 0.01
SMARCA4-201ENST00000344626 RABL2AQ9UBK7 228 aaPredicted RBP15.12■□□□□ 0.01
SMARCA4-201ENST00000344626 RABL2BQ9UNT1 228 aa15.12■□□□□ 0.01
SMARCA4-201ENST00000344626 ZNF638Q14966 1978 aaKnown RBP15.12■□□□□ 0.01
SMARCA4-201ENST00000344626 PEX14O75381 377 aa15.12■□□□□ 0.01
SMARCA4-201ENST00000344626 GXYLT1Q4G148 440 aa15.12■□□□□ 0.01
SMARCA4-201ENST00000344626 ADGRF3Q8IZF5 1079 aa15.12■□□□□ 0.01
SMARCA4-201ENST00000344626 OR13C2Q8NGS9 318 aa15.12■□□□□ 0.01
SMARCA4-201ENST00000344626 MMP27Q9H306 513 aa15.12■□□□□ 0.01
SMARCA4-201ENST00000344626 KCNS2Q9ULS6 477 aa15.12■□□□□ 0.01
SMARCA4-201ENST00000344626 COL11A1P12107 1806 aaPredicted RBP15.12■□□□□ 0.01
SMARCA4-201ENST00000344626 CHP2O43745 196 aa15.12■□□□□ 0.01
SMARCA4-201ENST00000344626 THBS1P07996 1170 aa15.12■□□□□ 0.01
SMARCA4-201ENST00000344626 ITGAMP11215 1152 aa15.12■□□□□ 0.01
SMARCA4-201ENST00000344626 EIF5AP63241 154 aaKnown RBP15.12■□□□□ 0.01
SMARCA4-201ENST00000344626 COX20Q5RI15 118 aa15.12■□□□□ 0.01
SMARCA4-201ENST00000344626 FAM69AQ5T7M9 428 aa15.12■□□□□ 0.01
SMARCA4-201ENST00000344626 XKRXQ6PP77 449 aa15.12■□□□□ 0.01
SMARCA4-201ENST00000344626 OR2A14Q96R47 310 aa15.12■□□□□ 0.01
SMARCA4-201ENST00000344626 LHX9Q9NQ69 397 aa15.12■□□□□ 0.01
SMARCA4-201ENST00000344626 H3BSA7 217 aa15.11■□□□□ 0.01
SMARCA4-201ENST00000344626 VAMP5O95183 116 aa15.11■□□□□ 0.01
SMARCA4-201ENST00000344626 IGHV3-9P01782 118 aa15.11■□□□□ 0.01
SMARCA4-201ENST00000344626 PPP1CAP62136 330 aa15.11■□□□□ 0.01
SMARCA4-201ENST00000344626 TP53I3Q53FA7 332 aa15.11■□□□□ 0.01
SMARCA4-201ENST00000344626 C1orf140Q5VVS0 124 aa15.11■□□□□ 0.01
SMARCA4-201ENST00000344626 C22orf42Q6IC83 251 aa15.11■□□□□ 0.01
SMARCA4-201ENST00000344626 MEX3DQ86XN8 651 aaKnown RBP15.11■□□□□ 0.01
SMARCA4-201ENST00000344626 KCNIP3Q9Y2W7 256 aa15.11■□□□□ 0.01
SMARCA4-201ENST00000344626 TVP23AA6NH52 213 aa15.11■□□□□ 0.01
SMARCA4-201ENST00000344626 HTR5AP47898 357 aa15.11■□□□□ 0.01
SMARCA4-201ENST00000344626 PITPNBP48739 271 aa15.11■□□□□ 0.01
SMARCA4-201ENST00000344626 AIMP2Q13155 320 aaKnown RBP15.11■□□□□ 0.01
SMARCA4-201ENST00000344626 TMEM105Q8N8V8 129 aa15.11■□□□□ 0.01
SMARCA4-201ENST00000344626 MED18Q9BUE0 208 aa15.11■□□□□ 0.01
SMARCA4-201ENST00000344626 UBAP1Q9NZ09 502 aa15.11■□□□□ 0.01
SMARCA4-201ENST00000344626 FBXL4Q9UKA2 621 aa15.11■□□□□ 0.01
SMARCA4-201ENST00000344626 TRIP11Q15643 1979 aa15.11■□□□□ 0.01
SMARCA4-201ENST00000344626 ZNF814B7Z6K7 855 aa15.11■□□□□ 0.01
SMARCA4-201ENST00000344626 CD160O95971 181 aa15.11■□□□□ 0.01
SMARCA4-201ENST00000344626 ZNF182P17025 639 aaPredicted RBP15.11■□□□□ 0.01
SMARCA4-201ENST00000344626 RAB3BP20337 219 aa15.11■□□□□ 0.01
SMARCA4-201ENST00000344626 UCNP55089 124 aa15.11■□□□□ 0.01
SMARCA4-201ENST00000344626 NKPD1Q17RQ9 610 aa15.11■□□□□ 0.01
SMARCA4-201ENST00000344626 ISXQ2M1V0 245 aa15.11■□□□□ 0.01
SMARCA4-201ENST00000344626 COL28A1Q2UY09 1125 aa15.11■□□□□ 0.01
SMARCA4-201ENST00000344626 TMEM102Q8N9M5 508 aaPredicted RBP15.11■□□□□ 0.01
SMARCA4-201ENST00000344626 MINDY2Q8NBR6 621 aa15.11■□□□□ 0.01
SMARCA4-201ENST00000344626 TRIB1Q96RU8 372 aa15.11■□□□□ 0.01
SMARCA4-201ENST00000344626 MICU1Q9BPX6 476 aa15.11■□□□□ 0.01
SMARCA4-201ENST00000344626 KATNB1Q9BVA0 655 aa15.11■□□□□ 0.01
SMARCA4-201ENST00000344626 ABRACLQ9P1F3 81 aa15.11■□□□□ 0.01
SMARCA4-201ENST00000344626 EXTL2Q9UBQ6 330 aa15.11■□□□□ 0.01
SMARCA4-201ENST00000344626 DUSP13Q9UII6 198 aa15.11■□□□□ 0.01
SMARCA4-201ENST00000344626 LHX6Q9UPM6 363 aa15.11■□□□□ 0.01
SMARCA4-201ENST00000344626 OR2A25A4D2G3 310 aa15.11■□□□□ 0.01
SMARCA4-201ENST00000344626 KDM4EB2RXH2 506 aaPredicted RBP15.11■□□□□ 0.01
SMARCA4-201ENST00000344626 CCNKO75909 580 aa15.11■□□□□ 0.01
SMARCA4-201ENST00000344626 UGT2B10P36537 528 aa15.11■□□□□ 0.01
SMARCA4-201ENST00000344626 PNLIPRP2P54317 469 aa15.11■□□□□ 0.01
SMARCA4-201ENST00000344626 ZNF322Q6U7Q0 402 aaPredicted RBP15.11■□□□□ 0.01
SMARCA4-201ENST00000344626 OR5D14Q8NGL3 314 aa15.11■□□□□ 0.01
SMARCA4-201ENST00000344626 APH1AQ96BI3 265 aa15.11■□□□□ 0.01
SMARCA4-201ENST00000344626 ERVMER34-1Q9H9K5 563 aa15.11■□□□□ 0.01
SMARCA4-201ENST00000344626 CACNA1IQ9P0X4 2223 aa15.1■□□□□ 0.01
SMARCA4-201ENST00000344626 GLSO94925 669 aaPredicted RBP15.1■□□□□ 0.01
SMARCA4-201ENST00000344626 HTR3BO95264 441 aa15.1■□□□□ 0.01
SMARCA4-201ENST00000344626 SOX3P41225 446 aa15.1■□□□□ 0.01
SMARCA4-201ENST00000344626 ART1P52961 327 aa15.1■□□□□ 0.01
SMARCA4-201ENST00000344626 RSPO4Q2I0M5 234 aaPredicted RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms