RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 TBC1D3FA6NER0 549 aaPredicted RBP8.89□□□□□ -0.99
HOXA1-201ENST00000343060 F8W036 122 aa8.89□□□□□ -0.99
HOXA1-201ENST00000343060 ATG12O94817 140 aa8.89□□□□□ -0.99
HOXA1-201ENST00000343060 GP1BAP07359 652 aa8.89□□□□□ -0.99
HOXA1-201ENST00000343060 MELTFP08582 738 aa8.89□□□□□ -0.99
HOXA1-201ENST00000343060 EDNRAP25101 427 aa8.89□□□□□ -0.99
HOXA1-201ENST00000343060 MPIP34949 423 aa8.89□□□□□ -0.99
HOXA1-201ENST00000343060 RORAP35398 523 aa8.89□□□□□ -0.99
HOXA1-201ENST00000343060 SCAND1P57086 179 aa8.89□□□□□ -0.99
HOXA1-201ENST00000343060 DEFA5Q01523 94 aa8.89□□□□□ -0.99
HOXA1-201ENST00000343060 ZNF345Q14585 488 aa8.89□□□□□ -0.99
HOXA1-201ENST00000343060 OR1Q1Q15612 314 aa8.89□□□□□ -0.99
HOXA1-201ENST00000343060 TBC1D3GQ6DHY5 549 aa8.89□□□□□ -0.99
HOXA1-201ENST00000343060 RAB11FIP2Q7L804 512 aa8.89□□□□□ -0.99
HOXA1-201ENST00000343060 SERPINA12Q8IW75 414 aa8.89□□□□□ -0.99
HOXA1-201ENST00000343060 OR2L13Q8N349 312 aa8.89□□□□□ -0.99
HOXA1-201ENST00000343060 ACOT4Q8N9L9 421 aa8.89□□□□□ -0.99
HOXA1-201ENST00000343060 CYB561A3Q8NBI2 242 aa8.89□□□□□ -0.99
HOXA1-201ENST00000343060 RELL2Q8NC24 303 aaPredicted RBP8.89□□□□□ -0.99
HOXA1-201ENST00000343060 TMIEQ8NEW7 156 aa8.89□□□□□ -0.99
HOXA1-201ENST00000343060 OR4C16Q8NGL9 310 aa8.89□□□□□ -0.99
HOXA1-201ENST00000343060 OR4C6Q8NH72 309 aa8.89□□□□□ -0.99
HOXA1-201ENST00000343060 C1orf216Q8TAB5 229 aa8.89□□□□□ -0.99
HOXA1-201ENST00000343060 ADAMTS15Q8TE58 950 aa8.89□□□□□ -0.99
HOXA1-201ENST00000343060 RGP1Q92546 391 aaPredicted RBP8.89□□□□□ -0.99
HOXA1-201ENST00000343060 BPIFA2Q96DR5 249 aa8.89□□□□□ -0.99
HOXA1-201ENST00000343060 MS4A6EQ96DS6 147 aa8.89□□□□□ -0.99
HOXA1-201ENST00000343060 PHYHIPLQ96FC7 376 aa8.89□□□□□ -0.99
HOXA1-201ENST00000343060 MS4A4EQ96PG1 132 aa8.89□□□□□ -0.99
HOXA1-201ENST00000343060 PDCD1LG2Q9BQ51 273 aa8.89□□□□□ -0.99
HOXA1-201ENST00000343060 ALX4Q9H161 411 aaPredicted RBP8.89□□□□□ -0.99
HOXA1-201ENST00000343060 ESRP2Q9H6T0 727 aaKnown RBP8.89□□□□□ -0.99
HOXA1-201ENST00000343060 PRSS16Q9NQE7 514 aa8.89□□□□□ -0.99
HOXA1-201ENST00000343060 NCDNQ9UBB6 729 aa8.89□□□□□ -0.99
HOXA1-201ENST00000343060 WDR45Q9Y484 360 aa8.89□□□□□ -0.99
HOXA1-201ENST00000343060 TET1Q8NFU7 2136 aa8.89□□□□□ -0.99
HOXA1-201ENST00000343060 SIGLEC5O15389 551 aa8.88□□□□□ -0.99
HOXA1-201ENST00000343060 PPP1R3DO95685 299 aa8.88□□□□□ -0.99
HOXA1-201ENST00000343060 IFNGP01579 166 aa8.88□□□□□ -0.99
HOXA1-201ENST00000343060 C8orf89P0DMQ9 161 aa8.88□□□□□ -0.99
HOXA1-201ENST00000343060 NAT2P11245 290 aa8.88□□□□□ -0.99
HOXA1-201ENST00000343060 SYN1P17600 705 aa8.88□□□□□ -0.99
HOXA1-201ENST00000343060 LAG3P18627 525 aa8.88□□□□□ -0.99
HOXA1-201ENST00000343060 CNR1P21554 472 aa8.88□□□□□ -0.99
HOXA1-201ENST00000343060 GPR1P46091 355 aa8.88□□□□□ -0.99
HOXA1-201ENST00000343060 SRSF4Q08170 494 aaKnown RBP8.88□□□□□ -0.99
HOXA1-201ENST00000343060 SIGLEC14Q08ET2 396 aa8.88□□□□□ -0.99
HOXA1-201ENST00000343060 FHL1Q13642 323 aa8.88□□□□□ -0.99
HOXA1-201ENST00000343060 AMZ1Q400G9 498 aa8.88□□□□□ -0.99
HOXA1-201ENST00000343060 C18orf63Q68DL7 685 aa8.88□□□□□ -0.99
HOXA1-201ENST00000343060 GLB1L2Q8IW92 636 aa8.88□□□□□ -0.99
HOXA1-201ENST00000343060 SLC35F2Q8IXU6 374 aa8.88□□□□□ -0.99
HOXA1-201ENST00000343060 KCNRGQ8N5I3 272 aa8.88□□□□□ -0.99
HOXA1-201ENST00000343060 LINC01555Q8NAE3 123 aa8.88□□□□□ -0.99
HOXA1-201ENST00000343060 OR14A16Q8NHC5 309 aa8.88□□□□□ -0.99
HOXA1-201ENST00000343060 CDS1Q92903 461 aa8.88□□□□□ -0.99
HOXA1-201ENST00000343060 SMAD5Q99717 465 aaKnown RBP8.88□□□□□ -0.99
HOXA1-201ENST00000343060 TRMT61BQ9BVS5 477 aaKnown RBP8.88□□□□□ -0.99
HOXA1-201ENST00000343060 SLC25A18Q9H1K4 315 aa8.88□□□□□ -0.99
HOXA1-201ENST00000343060 PIGMQ9H3S5 423 aa8.88□□□□□ -0.99
HOXA1-201ENST00000343060 TAS2R8Q9NYW2 309 aa8.88□□□□□ -0.99
HOXA1-201ENST00000343060 RAB19A4D1S5 217 aa8.88□□□□□ -0.99
HOXA1-201ENST00000343060 MANSC4A6NHS7 340 aaPredicted RBP8.88□□□□□ -0.99
HOXA1-201ENST00000343060 RASGRP1O95267 797 aa8.88□□□□□ -0.99
HOXA1-201ENST00000343060 CD8AP01732 235 aa8.88□□□□□ -0.99
HOXA1-201ENST00000343060 GYPBP06028 91 aa8.88□□□□□ -0.99
HOXA1-201ENST00000343060 PTHLHP12272 177 aa8.88□□□□□ -0.99
HOXA1-201ENST00000343060 CSRP1P21291 193 aaKnown RBP8.88□□□□□ -0.99
HOXA1-201ENST00000343060 AGTR1P30556 359 aa8.88□□□□□ -0.99
HOXA1-201ENST00000343060 BCL6P41182 706 aa8.88□□□□□ -0.99
HOXA1-201ENST00000343060 TSFMP43897 325 aaKnown RBP8.88□□□□□ -0.99
HOXA1-201ENST00000343060 RAB13P51153 203 aa8.88□□□□□ -0.99
HOXA1-201ENST00000343060 CLDN2P57739 230 aa8.88□□□□□ -0.99
HOXA1-201ENST00000343060 SORDQ00796 357 aa8.88□□□□□ -0.99
HOXA1-201ENST00000343060 OC90Q02509 493 aaPredicted RBP8.88□□□□□ -0.99
HOXA1-201ENST00000343060 LTB4RQ15722 352 aa8.88□□□□□ -0.99
HOXA1-201ENST00000343060 ZNF528Q3MIS6 628 aa8.88□□□□□ -0.99
HOXA1-201ENST00000343060 POM121L1PQ3SYA9 428 aa8.88□□□□□ -0.99
HOXA1-201ENST00000343060 CCDC157Q569K6 752 aa8.88□□□□□ -0.99
HOXA1-201ENST00000343060 EXOSC6Q5RKV6 272 aaKnown RBP8.88□□□□□ -0.99
HOXA1-201ENST00000343060 FCRLBQ6BAA4 426 aa8.88□□□□□ -0.99
HOXA1-201ENST00000343060 FAM111BQ6SJ93 734 aa8.88□□□□□ -0.99
HOXA1-201ENST00000343060 LRRN1Q6UXK5 716 aa8.88□□□□□ -0.99
HOXA1-201ENST00000343060 KRT77Q7Z794 578 aa8.88□□□□□ -0.99
HOXA1-201ENST00000343060 CCDC36Q8IYA8 594 aa8.88□□□□□ -0.99
HOXA1-201ENST00000343060 ARMC10Q8N2F6 343 aa8.88□□□□□ -0.99
HOXA1-201ENST00000343060 SLC16A11Q8NCK7 471 aa8.88□□□□□ -0.99
HOXA1-201ENST00000343060 DMBX1Q8NFW5 382 aa8.88□□□□□ -0.99
HOXA1-201ENST00000343060 CYB5D2Q8WUJ1 264 aa8.88□□□□□ -0.99
HOXA1-201ENST00000343060 EDAQ92838 391 aa8.88□□□□□ -0.99
HOXA1-201ENST00000343060 RNF166Q96A37 237 aaPredicted RBP8.88□□□□□ -0.99
HOXA1-201ENST00000343060 MRPL48Q96GC5 212 aaKnown RBP8.88□□□□□ -0.99
HOXA1-201ENST00000343060 SCLYQ96I15 445 aa8.88□□□□□ -0.99
HOXA1-201ENST00000343060 ZNF350Q9GZX5 532 aa8.88□□□□□ -0.99
HOXA1-201ENST00000343060 GAREM1Q9H706 876 aa8.88□□□□□ -0.99
HOXA1-201ENST00000343060 APMAPQ9HDC9 416 aa8.88□□□□□ -0.99
HOXA1-201ENST00000343060 MEPEQ9NQ76 525 aaPredicted RBP8.88□□□□□ -0.99
HOXA1-201ENST00000343060 TAS2R3Q9NYW6 316 aa8.88□□□□□ -0.99
HOXA1-201ENST00000343060 ZNF281Q9Y2X9 895 aa8.88□□□□□ -0.99
HOXA1-201ENST00000343060 MED31Q9Y3C7 131 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms