RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 RBM34P42696 430 aaKnown RBP17.08■□□□□ 0.33
SMPD1-201ENST00000342245 RBP2P50120 134 aa17.08■□□□□ 0.33
SMPD1-201ENST00000342245 IRF4Q15306 451 aa17.08■□□□□ 0.33
SMPD1-201ENST00000342245 HMGN3Q15651 99 aa17.08■□□□□ 0.33
SMPD1-201ENST00000342245 LY6G6FQ5SQ64 297 aa17.08■□□□□ 0.33
SMPD1-201ENST00000342245 MBOAT2Q6ZWT7 520 aa17.08■□□□□ 0.33
SMPD1-201ENST00000342245 REC114Q7Z4M0 266 aa17.08■□□□□ 0.33
SMPD1-201ENST00000342245 INO80EQ8NBZ0 244 aaPredicted RBP17.08■□□□□ 0.33
SMPD1-201ENST00000342245 SDR9C7Q8NEX9 313 aa17.08■□□□□ 0.33
SMPD1-201ENST00000342245 DIO2Q92813 273 aa17.08■□□□□ 0.33
SMPD1-201ENST00000342245 KISS1RQ969F8 398 aaPredicted RBP17.08■□□□□ 0.33
SMPD1-201ENST00000342245 DERL3Q96Q80 235 aa17.08■□□□□ 0.33
SMPD1-201ENST00000342245 FAM183AA6NL82 134 aa17.08■□□□□ 0.32
SMPD1-201ENST00000342245 PIP5K1CO60331 668 aa17.08■□□□□ 0.32
SMPD1-201ENST00000342245 SLCO2B1O94956 709 aa17.08■□□□□ 0.32
SMPD1-201ENST00000342245 TGFB1P01137 390 aa17.08■□□□□ 0.32
SMPD1-201ENST00000342245 CD2P06729 351 aa17.08■□□□□ 0.32
SMPD1-201ENST00000342245 SBK2P0C263 348 aa17.08■□□□□ 0.32
SMPD1-201ENST00000342245 OR12D2P58182 307 aa17.08■□□□□ 0.32
SMPD1-201ENST00000342245 TAF10Q12962 218 aa17.08■□□□□ 0.32
SMPD1-201ENST00000342245 CHAF1BQ13112 559 aa17.08■□□□□ 0.32
SMPD1-201ENST00000342245 INPP5JQ15735 1006 aaPredicted RBP17.08■□□□□ 0.32
SMPD1-201ENST00000342245 PCGF3Q3KNV8 242 aa17.08■□□□□ 0.32
SMPD1-201ENST00000342245 DNLZQ5SXM8 178 aa17.08■□□□□ 0.32
SMPD1-201ENST00000342245 DRAM2Q6UX65 266 aa17.08■□□□□ 0.32
SMPD1-201ENST00000342245 OR52L1Q8NGH7 329 aa17.08■□□□□ 0.32
SMPD1-201ENST00000342245 OR4C16Q8NGL9 310 aa17.08■□□□□ 0.32
SMPD1-201ENST00000342245 PAQR8Q8TEZ7 354 aa17.08■□□□□ 0.32
SMPD1-201ENST00000342245 UBE2E3Q969T4 207 aa17.08■□□□□ 0.32
SMPD1-201ENST00000342245 MAP3K3Q99759 626 aa17.08■□□□□ 0.32
SMPD1-201ENST00000342245 EXO5Q9H790 373 aa17.08■□□□□ 0.32
SMPD1-201ENST00000342245 A0A1B0GTI1 187 aa17.07■□□□□ 0.32
SMPD1-201ENST00000342245 FAM86C2PA6NEL3 165 aa17.07■□□□□ 0.32
SMPD1-201ENST00000342245 TMEM189-UBE2V1I3L0A0 370 aa17.07■□□□□ 0.32
SMPD1-201ENST00000342245 CTNSO60931 367 aa17.07■□□□□ 0.32
SMPD1-201ENST00000342245 POMCP01189 267 aa17.07■□□□□ 0.32
SMPD1-201ENST00000342245 CLTBP09497 229 aa17.07■□□□□ 0.32
SMPD1-201ENST00000342245 OR4Q2P0C623 313 aa17.07■□□□□ 0.32
SMPD1-201ENST00000342245 AKAIN1P0CW23 69 aa17.07■□□□□ 0.32
SMPD1-201ENST00000342245 SRMP19623 302 aa17.07■□□□□ 0.32
SMPD1-201ENST00000342245 CASRP41180 1078 aa17.07■□□□□ 0.32
SMPD1-201ENST00000342245 FRKP42685 505 aaPredicted RBP17.07■□□□□ 0.32
SMPD1-201ENST00000342245 KHKP50053 298 aa17.07■□□□□ 0.32
SMPD1-201ENST00000342245 ZNF85Q03923 595 aa17.07■□□□□ 0.32
SMPD1-201ENST00000342245 CDK5R1Q15078 307 aa17.07■□□□□ 0.32
SMPD1-201ENST00000342245 PWWP2BQ6NUJ5 590 aa17.07■□□□□ 0.32
SMPD1-201ENST00000342245 DMRTC2Q8IXT2 367 aaPredicted RBP17.07■□□□□ 0.32
SMPD1-201ENST00000342245 OR13C5Q8NGS8 318 aa17.07■□□□□ 0.32
SMPD1-201ENST00000342245 XAGE5Q8WWM1 108 aa17.07■□□□□ 0.32
SMPD1-201ENST00000342245 MALSU1Q96EH3 234 aa17.07■□□□□ 0.32
SMPD1-201ENST00000342245 SAMD8Q96LT4 415 aa17.07■□□□□ 0.32
SMPD1-201ENST00000342245 LYSMD1Q96S90 227 aa17.07■□□□□ 0.32
SMPD1-201ENST00000342245 TEAD3Q99594 435 aa17.07■□□□□ 0.32
SMPD1-201ENST00000342245 ARHGDIGQ99819 225 aa17.07■□□□□ 0.32
SMPD1-201ENST00000342245 CWH43Q9H720 699 aa17.07■□□□□ 0.32
SMPD1-201ENST00000342245 HAO2Q9NYQ3 351 aa17.07■□□□□ 0.32
SMPD1-201ENST00000342245 DYRK1BQ9Y463 629 aa17.07■□□□□ 0.32
SMPD1-201ENST00000342245 A0A1W2PPE3 182 aa17.07■□□□□ 0.32
SMPD1-201ENST00000342245 GXYLT2A0PJZ3 443 aa17.07■□□□□ 0.32
SMPD1-201ENST00000342245 GPRIN2O60269 458 aa17.07■□□□□ 0.32
SMPD1-201ENST00000342245 INHAP05111 366 aa17.07■□□□□ 0.32
SMPD1-201ENST00000342245 ANXA2P07355 339 aaKnown RBP17.07■□□□□ 0.32
SMPD1-201ENST00000342245 CDK2P24941 298 aa17.07■□□□□ 0.32
SMPD1-201ENST00000342245 ITGA3P26006 1051 aa17.07■□□□□ 0.32
SMPD1-201ENST00000342245 UBE2MP61081 183 aaKnown RBP17.07■□□□□ 0.32
SMPD1-201ENST00000342245 ACTA2P62736 377 aa17.07■□□□□ 0.32
SMPD1-201ENST00000342245 ACTG2P63267 376 aa17.07■□□□□ 0.32
SMPD1-201ENST00000342245 SSBP1Q04837 148 aaKnown RBP17.07■□□□□ 0.32
SMPD1-201ENST00000342245 SLBPQ14493 270 aaKnown RBP eCLIP17.07■□□□□ 0.32
SMPD1-201ENST00000342245 ZNF234Q14588 700 aa17.07■□□□□ 0.32
SMPD1-201ENST00000342245 KCNAB1Q14722 419 aa17.07■□□□□ 0.32
SMPD1-201ENST00000342245 GFOD2Q3B7J2 385 aa17.07■□□□□ 0.32
SMPD1-201ENST00000342245 PLEKHN1Q494U1 663 aaPredicted RBP17.07■□□□□ 0.32
SMPD1-201ENST00000342245 C9orf131Q5VYM1 1079 aa17.07■□□□□ 0.32
SMPD1-201ENST00000342245 FAM180BQ6P0A1 224 aa17.07■□□□□ 0.32
SMPD1-201ENST00000342245 SYT9Q86SS6 491 aa17.07■□□□□ 0.32
SMPD1-201ENST00000342245 ANGPTL5Q86XS5 388 aa17.07■□□□□ 0.32
SMPD1-201ENST00000342245 LNX2Q8N448 690 aa17.07■□□□□ 0.32
SMPD1-201ENST00000342245 SLC30A7Q8NEW0 376 aa17.07■□□□□ 0.32
SMPD1-201ENST00000342245 STEAP2Q8NFT2 490 aa17.07■□□□□ 0.32
SMPD1-201ENST00000342245 OR4A4PQ8NGN8 299 aa17.07■□□□□ 0.32
SMPD1-201ENST00000342245 SMPDL3BQ92485 455 aa17.07■□□□□ 0.32
SMPD1-201ENST00000342245 NEIL2Q969S2 332 aa17.07■□□□□ 0.32
SMPD1-201ENST00000342245 RAB3CQ96E17 227 aa17.07■□□□□ 0.32
SMPD1-201ENST00000342245 ZNF764Q96H86 408 aaPredicted RBP17.07■□□□□ 0.32
SMPD1-201ENST00000342245 ELF4Q99607 663 aaPredicted RBP17.07■□□□□ 0.32
SMPD1-201ENST00000342245 TRMT61BQ9BVS5 477 aaKnown RBP17.07■□□□□ 0.32
SMPD1-201ENST00000342245 GPR62Q9BZJ7 368 aa17.07■□□□□ 0.32
SMPD1-201ENST00000342245 SIRT3Q9NTG7 399 aaPredicted RBP17.07■□□□□ 0.32
SMPD1-201ENST00000342245 C2orf42Q9NWW7 574 aa17.07■□□□□ 0.32
SMPD1-201ENST00000342245 TGM5O43548 720 aa17.06■□□□□ 0.32
SMPD1-201ENST00000342245 GLSO94925 669 aaPredicted RBP17.06■□□□□ 0.32
SMPD1-201ENST00000342245 C1GALT1C1LP0DN25 315 aa17.06■□□□□ 0.32
SMPD1-201ENST00000342245 SCAND1P57086 179 aa17.06■□□□□ 0.32
SMPD1-201ENST00000342245 CD81P60033 236 aa17.06■□□□□ 0.32
SMPD1-201ENST00000342245 MLC1Q15049 377 aa17.06■□□□□ 0.32
SMPD1-201ENST00000342245 LDLRAD1Q5T700 205 aa17.06■□□□□ 0.32
SMPD1-201ENST00000342245 RPL22L1Q6P5R6 122 aaKnown RBP17.06■□□□□ 0.32
SMPD1-201ENST00000342245 ZNF467Q7Z7K2 595 aaPredicted RBP17.06■□□□□ 0.32
SMPD1-201ENST00000342245 SYS1Q8N2H4 156 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms