RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 RPS4Y1P22090 263 aaKnown RBP9.28□□□□□ -0.92
RBFOX1-202ENST00000340209 OR10A3P58181 314 aa9.28□□□□□ -0.92
RBFOX1-202ENST00000340209 WBP2NLQ6ICG8 309 aa9.28□□□□□ -0.92
RBFOX1-202ENST00000340209 ARHGAP11AQ6P4F7 1023 aa9.28□□□□□ -0.92
RBFOX1-202ENST00000340209 CD300LDQ6UXZ3 194 aa9.28□□□□□ -0.92
RBFOX1-202ENST00000340209 OR5W2Q8NH69 310 aa9.28□□□□□ -0.92
RBFOX1-202ENST00000340209 RHBDD1Q8TEB9 315 aa9.28□□□□□ -0.92
RBFOX1-202ENST00000340209 ZNF721Q8TF20 911 aa9.28□□□□□ -0.92
RBFOX1-202ENST00000340209 NPAS1Q99742 590 aa9.28□□□□□ -0.92
RBFOX1-202ENST00000340209 ULBP3Q9BZM4 244 aa9.28□□□□□ -0.92
RBFOX1-202ENST00000340209 PRO3102Q9H379 93 aa9.28□□□□□ -0.92
RBFOX1-202ENST00000340209 TRIM36Q9NQ86 728 aa9.28□□□□□ -0.92
RBFOX1-202ENST00000340209 CMC2Q9NRP2 79 aa9.28□□□□□ -0.92
RBFOX1-202ENST00000340209 ACOXLQ9NUZ1 547 aa9.28□□□□□ -0.92
RBFOX1-202ENST00000340209 NDUFB11Q9NX14 153 aa9.28□□□□□ -0.92
RBFOX1-202ENST00000340209 PCDHGB6Q9Y5F9 930 aa9.28□□□□□ -0.92
RBFOX1-202ENST00000340209 TMEM72A0PK05 275 aa9.28□□□□□ -0.92
RBFOX1-202ENST00000340209 OR6C68A6NDL8 312 aa9.28□□□□□ -0.92
RBFOX1-202ENST00000340209 XKRYO14609 159 aa9.28□□□□□ -0.92
RBFOX1-202ENST00000340209 MRPS14O60783 128 aaKnown RBP9.28□□□□□ -0.92
RBFOX1-202ENST00000340209 APOA1P02647 267 aa9.28□□□□□ -0.92
RBFOX1-202ENST00000340209 CCKBRP32239 447 aa9.28□□□□□ -0.92
RBFOX1-202ENST00000340209 RPS18P62269 152 aaKnown RBP9.28□□□□□ -0.92
RBFOX1-202ENST00000340209 ZNF57Q68EA5 555 aaPredicted RBP9.28□□□□□ -0.92
RBFOX1-202ENST00000340209 DNAJA4Q8WW22 397 aaPredicted RBP9.28□□□□□ -0.92
RBFOX1-202ENST00000340209 HDHD2Q9H0R4 259 aa9.28□□□□□ -0.92
RBFOX1-202ENST00000340209 KLK4Q9Y5K2 254 aa9.28□□□□□ -0.92
RBFOX1-202ENST00000340209 A0A087WV48 116 aa9.28□□□□□ -0.92
RBFOX1-202ENST00000340209 MT-ND5P03915 603 aa9.28□□□□□ -0.92
RBFOX1-202ENST00000340209 ACY1Q03154 408 aa9.28□□□□□ -0.92
RBFOX1-202ENST00000340209 RELAQ04206 551 aa9.28□□□□□ -0.92
RBFOX1-202ENST00000340209 QPRTQ15274 297 aa9.28□□□□□ -0.92
RBFOX1-202ENST00000340209 CARD17Q5XLA6 110 aa9.28□□□□□ -0.92
RBFOX1-202ENST00000340209 PMS2CLQ68D20 193 aa9.28□□□□□ -0.92
RBFOX1-202ENST00000340209 LRRC69Q6ZNQ3 347 aa9.28□□□□□ -0.92
RBFOX1-202ENST00000340209 RNF113BQ8IZP6 322 aaKnown RBP9.28□□□□□ -0.92
RBFOX1-202ENST00000340209 LNX2Q8N448 690 aa9.28□□□□□ -0.92
RBFOX1-202ENST00000340209 ARHGEF39Q8N4T4 335 aa9.28□□□□□ -0.92
RBFOX1-202ENST00000340209 BRIX1Q8TDN6 353 aaKnown RBP9.28□□□□□ -0.92
RBFOX1-202ENST00000340209 ARRDC1-AS1Q9H2J1 176 aa9.28□□□□□ -0.92
RBFOX1-202ENST00000340209 SLC22A11Q9NSA0 550 aa9.28□□□□□ -0.92
RBFOX1-202ENST00000340209 RALGAPA1Q6GYQ0 2036 aa9.28□□□□□ -0.92
RBFOX1-202ENST00000340209 TMEM131Q92545 1883 aa9.27□□□□□ -0.92
RBFOX1-202ENST00000340209 ACOD1A6NK06 481 aa9.27□□□□□ -0.92
RBFOX1-202ENST00000340209 ZNF354AO60765 605 aaPredicted RBP9.27□□□□□ -0.92
RBFOX1-202ENST00000340209 OR2J2O76002 312 aa9.27□□□□□ -0.92
RBFOX1-202ENST00000340209 SBK2P0C263 348 aa9.27□□□□□ -0.92
RBFOX1-202ENST00000340209 SPNP16150 400 aa9.27□□□□□ -0.92
RBFOX1-202ENST00000340209 ZNF28P17035 718 aa9.27□□□□□ -0.92
RBFOX1-202ENST00000340209 OTX2P32243 289 aa9.27□□□□□ -0.92
RBFOX1-202ENST00000340209 EIF2B2P49770 351 aaKnown RBP9.27□□□□□ -0.92
RBFOX1-202ENST00000340209 PPP5CP53041 499 aa9.27□□□□□ -0.92
RBFOX1-202ENST00000340209 DCDP81605 110 aaKnown RBP9.27□□□□□ -0.92
RBFOX1-202ENST00000340209 ASB18Q6ZVZ8 466 aa9.27□□□□□ -0.92
RBFOX1-202ENST00000340209 IZUMO1Q8IYV9 350 aa9.27□□□□□ -0.92
RBFOX1-202ENST00000340209 TAAR8Q969N4 342 aa9.27□□□□□ -0.92
RBFOX1-202ENST00000340209 ZNF775Q96BV0 537 aaPredicted RBP9.27□□□□□ -0.92
RBFOX1-202ENST00000340209 ADAD1Q96M93 576 aaKnown RBP9.27□□□□□ -0.92
RBFOX1-202ENST00000340209 PELOQ9BRX2 385 aaKnown RBP9.27□□□□□ -0.92
RBFOX1-202ENST00000340209 DEFB126Q9BYW3 111 aa9.27□□□□□ -0.92
RBFOX1-202ENST00000340209 SUSD2Q9UGT4 822 aa9.27□□□□□ -0.92
RBFOX1-202ENST00000340209 RBMX2Q9Y388 322 aaKnown RBP9.27□□□□□ -0.92
RBFOX1-202ENST00000340209 IRGMA1A4Y4 181 aa9.27□□□□□ -0.93
RBFOX1-202ENST00000340209 ZNF670-ZNF695F2Z2N8 137 aa9.27□□□□□ -0.93
RBFOX1-202ENST00000340209 HLA-DPB1P04440 258 aa9.27□□□□□ -0.93
RBFOX1-202ENST00000340209 IL11P20809 199 aa9.27□□□□□ -0.93
RBFOX1-202ENST00000340209 EPHA4P54764 986 aa9.27□□□□□ -0.93
RBFOX1-202ENST00000340209 FOXK1P85037 733 aa9.27□□□□□ -0.93
RBFOX1-202ENST00000340209 RPL18Q07020 188 aaKnown RBP9.27□□□□□ -0.93
RBFOX1-202ENST00000340209 OR7A5Q15622 319 aa9.27□□□□□ -0.93
RBFOX1-202ENST00000340209 COL28A1Q2UY09 1125 aa9.27□□□□□ -0.93
RBFOX1-202ENST00000340209 PM20D2Q8IYS1 436 aa9.27□□□□□ -0.93
RBFOX1-202ENST00000340209 YIPF7Q8N8F6 280 aa9.27□□□□□ -0.93
RBFOX1-202ENST00000340209 ZNF671Q8TAW3 534 aa9.27□□□□□ -0.93
RBFOX1-202ENST00000340209 UBASH3BQ8TF42 649 aa9.27□□□□□ -0.93
RBFOX1-202ENST00000340209 CNN2Q99439 309 aaKnown RBP9.27□□□□□ -0.93
RBFOX1-202ENST00000340209 DUSP23Q9BVJ7 150 aa9.27□□□□□ -0.93
RBFOX1-202ENST00000340209 CMAHPQ9Y471 501 aa9.27□□□□□ -0.93
RBFOX1-202ENST00000340209 MMACHCQ9Y4U1 282 aa9.27□□□□□ -0.93
RBFOX1-202ENST00000340209 R4GN57 208 aa9.27□□□□□ -0.93
RBFOX1-202ENST00000340209 CEP192Q8TEP8 1941 aa9.27□□□□□ -0.93
RBFOX1-202ENST00000340209 A0A087WUJ7 227 aa9.27□□□□□ -0.93
RBFOX1-202ENST00000340209 TRBV2A0A0J9YWF9 115 aa9.27□□□□□ -0.93
RBFOX1-202ENST00000340209 FUOMA2VDF0 154 aa9.27□□□□□ -0.93
RBFOX1-202ENST00000340209 SUSD5O60279 629 aa9.27□□□□□ -0.93
RBFOX1-202ENST00000340209 NKX2-5P52952 324 aaPredicted RBP9.27□□□□□ -0.93
RBFOX1-202ENST00000340209 RNF4P78317 190 aa9.27□□□□□ -0.93
RBFOX1-202ENST00000340209 MEP1BQ16820 701 aa9.27□□□□□ -0.93
RBFOX1-202ENST00000340209 DDI2Q5TDH0 399 aa9.27□□□□□ -0.93
RBFOX1-202ENST00000340209 NIPAL1Q6NVV3 410 aa9.27□□□□□ -0.93
RBFOX1-202ENST00000340209 TMPRSS11FQ6ZWK6 438 aa9.27□□□□□ -0.93
RBFOX1-202ENST00000340209 SLC35F2Q8IXU6 374 aa9.27□□□□□ -0.93
RBFOX1-202ENST00000340209 UBALD2Q8IYN6 164 aa9.27□□□□□ -0.93
RBFOX1-202ENST00000340209 ZFP3Q96NJ6 502 aa9.27□□□□□ -0.93
RBFOX1-202ENST00000340209 EMC6Q9BV81 110 aa9.27□□□□□ -0.93
RBFOX1-202ENST00000340209 BABAM2Q9NXR7 383 aa9.27□□□□□ -0.93
RBFOX1-202ENST00000340209 AK6Q9Y3D8 172 aaKnown RBP9.27□□□□□ -0.93
RBFOX1-202ENST00000340209 ZNF337Q9Y3M9 751 aa9.27□□□□□ -0.93
RBFOX1-202ENST00000340209 FREM3P0C091 2139 aa9.27□□□□□ -0.93
RBFOX1-202ENST00000340209 TMEM265A0A087WTH1 108 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms