RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 ASPNQ9BXN1 380 aa13.09□□□□□ -0.31
NIPAL3-202ENST00000339255 TEX12Q9BXU0 123 aa13.09□□□□□ -0.31
NIPAL3-202ENST00000339255 TMEM185BQ9H7F4 350 aa13.09□□□□□ -0.31
NIPAL3-202ENST00000339255 LOC100130705A0A1B0GUX0 176 aa13.08□□□□□ -0.31
NIPAL3-202ENST00000339255 LIPT2A6NK58 231 aa13.08□□□□□ -0.31
NIPAL3-202ENST00000339255 FTCDNL1E5RQL4 147 aa13.08□□□□□ -0.31
NIPAL3-202ENST00000339255 K7EM74 188 aa13.08□□□□□ -0.31
NIPAL3-202ENST00000339255 BCKDKO14874 412 aa13.08□□□□□ -0.31
NIPAL3-202ENST00000339255 DNPH1O43598 174 aa13.08□□□□□ -0.31
NIPAL3-202ENST00000339255 SOX14O95416 240 aa13.08□□□□□ -0.31
NIPAL3-202ENST00000339255 PMS2P2O95744 297 aa13.08□□□□□ -0.31
NIPAL3-202ENST00000339255 CRYABP02511 175 aaKnown RBP13.08□□□□□ -0.31
NIPAL3-202ENST00000339255 SFTPCP11686 197 aa13.08□□□□□ -0.31
NIPAL3-202ENST00000339255 ACADSP16219 412 aa13.08□□□□□ -0.31
NIPAL3-202ENST00000339255 BMP7P18075 431 aa13.08□□□□□ -0.31
NIPAL3-202ENST00000339255 SFTPDP35247 375 aa13.08□□□□□ -0.31
NIPAL3-202ENST00000339255 CSNK2A1P68400 391 aaPredicted RBP13.08□□□□□ -0.31
NIPAL3-202ENST00000339255 ADARB1P78563 741 aaKnown RBP13.08□□□□□ -0.31
NIPAL3-202ENST00000339255 SGCBQ16585 318 aa13.08□□□□□ -0.31
NIPAL3-202ENST00000339255 TMEM176BQ3YBM2 270 aaPredicted RBP13.08□□□□□ -0.31
NIPAL3-202ENST00000339255 C6orf52Q5T4I8 152 aa13.08□□□□□ -0.31
NIPAL3-202ENST00000339255 SLC6A19Q695T7 634 aa13.08□□□□□ -0.31
NIPAL3-202ENST00000339255 ESPNLQ6ZVH7 1005 aa13.08□□□□□ -0.31
NIPAL3-202ENST00000339255 NANOGNBQ7Z5D8 188 aa13.08□□□□□ -0.31
NIPAL3-202ENST00000339255 ATP6V1C2Q8NEY4 427 aa13.08□□□□□ -0.31
NIPAL3-202ENST00000339255 SLC39A7Q92504 469 aa13.08□□□□□ -0.31
NIPAL3-202ENST00000339255 MIB2Q96AX9 1013 aa13.08□□□□□ -0.31
NIPAL3-202ENST00000339255 HRASLS5Q96KN8 279 aa13.08□□□□□ -0.31
NIPAL3-202ENST00000339255 KLHL15Q96M94 604 aa13.08□□□□□ -0.31
NIPAL3-202ENST00000339255 OR5B2Q96R09 309 aa13.08□□□□□ -0.31
NIPAL3-202ENST00000339255 PITX2Q99697 317 aa13.08□□□□□ -0.31
NIPAL3-202ENST00000339255 ANKRD60Q9BZ19 345 aa13.08□□□□□ -0.31
NIPAL3-202ENST00000339255 PRRG3Q9BZD7 231 aa13.08□□□□□ -0.31
NIPAL3-202ENST00000339255 TBC1D23Q9NUY8 699 aa13.08□□□□□ -0.31
NIPAL3-202ENST00000339255 ALKBH4Q9NXW9 302 aa13.08□□□□□ -0.31
NIPAL3-202ENST00000339255 MRPL39Q9NYK5 338 aaKnown RBP13.08□□□□□ -0.31
NIPAL3-202ENST00000339255 NDRG4Q9ULP0 352 aaKnown RBP13.08□□□□□ -0.31
NIPAL3-202ENST00000339255 HIF3AQ9Y2N7 669 aa13.08□□□□□ -0.31
NIPAL3-202ENST00000339255 SVILO95425 2214 aa13.08□□□□□ -0.32
NIPAL3-202ENST00000339255 PRRC2CQ9Y520 2896 aaKnown RBP13.08□□□□□ -0.32
NIPAL3-202ENST00000339255 TRAV27A0A087WT01 109 aa13.08□□□□□ -0.32
NIPAL3-202ENST00000339255 ZAR1LA6NP61 321 aa13.08□□□□□ -0.32
NIPAL3-202ENST00000339255 PTP4A3O75365 173 aa13.08□□□□□ -0.32
NIPAL3-202ENST00000339255 NDUFB2O95178 105 aa13.08□□□□□ -0.32
NIPAL3-202ENST00000339255 IGHG3P01860 377 aa13.08□□□□□ -0.32
NIPAL3-202ENST00000339255 TP53P04637 393 aaPredicted RBP13.08□□□□□ -0.32
NIPAL3-202ENST00000339255 CELA3AP09093 270 aa13.08□□□□□ -0.32
NIPAL3-202ENST00000339255 POU1F1P28069 291 aa13.08□□□□□ -0.32
NIPAL3-202ENST00000339255 UQCRC1P31930 480 aa13.08□□□□□ -0.32
NIPAL3-202ENST00000339255 SLC35A1P78382 337 aa13.08□□□□□ -0.32
NIPAL3-202ENST00000339255 PMP22Q01453 160 aa13.08□□□□□ -0.32
NIPAL3-202ENST00000339255 PTGES3Q15185 160 aaKnown RBP13.08□□□□□ -0.32
NIPAL3-202ENST00000339255 BCL2A1Q16548 175 aa13.08□□□□□ -0.32
NIPAL3-202ENST00000339255 LINC00303Q3SY05 128 aa13.08□□□□□ -0.32
NIPAL3-202ENST00000339255 RNFT1Q5M7Z0 435 aa13.08□□□□□ -0.32
NIPAL3-202ENST00000339255 C1QL3Q5VWW1 255 aa13.08□□□□□ -0.32
NIPAL3-202ENST00000339255 SLC27A4Q6P1M0 643 aa13.08□□□□□ -0.32
NIPAL3-202ENST00000339255 KIF18BQ86Y91 864 aa13.08□□□□□ -0.32
NIPAL3-202ENST00000339255 SETD9Q8NE22 299 aa13.08□□□□□ -0.32
NIPAL3-202ENST00000339255 OR5J2Q8NH18 312 aa13.08□□□□□ -0.32
NIPAL3-202ENST00000339255 OR51A7Q8NH64 312 aa13.08□□□□□ -0.32
NIPAL3-202ENST00000339255 NEIL3Q8TAT5 605 aa13.08□□□□□ -0.32
NIPAL3-202ENST00000339255 APOL4Q9BPW4 351 aa13.08□□□□□ -0.32
NIPAL3-202ENST00000339255 OR52D1Q9H346 318 aa13.08□□□□□ -0.32
NIPAL3-202ENST00000339255 SLC25A19Q9HC21 320 aa13.08□□□□□ -0.32
NIPAL3-202ENST00000339255 ZMIZ1Q9ULJ6 1067 aa13.08□□□□□ -0.32
NIPAL3-202ENST00000339255 LHX6Q9UPM6 363 aa13.08□□□□□ -0.32
NIPAL3-202ENST00000339255 BAIAP2Q9UQB8 552 aa13.08□□□□□ -0.32
NIPAL3-202ENST00000339255 B3GALT5Q9Y2C3 310 aa13.08□□□□□ -0.32
NIPAL3-202ENST00000339255 ATMQ13315 3056 aa13.08□□□□□ -0.32
NIPAL3-202ENST00000339255 TRGV5A0A0B4J1U4 118 aa13.07□□□□□ -0.32
NIPAL3-202ENST00000339255 E9PQ18 207 aa13.07□□□□□ -0.32
NIPAL3-202ENST00000339255 SULT2B1O00204 365 aa13.07□□□□□ -0.32
NIPAL3-202ENST00000339255 DENRO43583 198 aaKnown RBP13.07□□□□□ -0.32
NIPAL3-202ENST00000339255 EIF1BO60739 113 aaKnown RBP13.07□□□□□ -0.32
NIPAL3-202ENST00000339255 TSPAN19P0C672 248 aa13.07□□□□□ -0.32
NIPAL3-202ENST00000339255 SLC6A6P31641 620 aa13.07□□□□□ -0.32
NIPAL3-202ENST00000339255 DIO1P49895 249 aa13.07□□□□□ -0.32
NIPAL3-202ENST00000339255 SMSP52788 366 aa13.07□□□□□ -0.32
NIPAL3-202ENST00000339255 OR7A5Q15622 319 aa13.07□□□□□ -0.32
NIPAL3-202ENST00000339255 CMPK2Q5EBM0 449 aa13.07□□□□□ -0.32
NIPAL3-202ENST00000339255 PDSS1Q5T2R2 415 aa13.07□□□□□ -0.32
NIPAL3-202ENST00000339255 TMPPEQ6ZT21 453 aa13.07□□□□□ -0.32
NIPAL3-202ENST00000339255 LRRC17Q8N6Y2 441 aa13.07□□□□□ -0.32
NIPAL3-202ENST00000339255 ADPRHL1Q8NDY3 354 aa13.07□□□□□ -0.32
NIPAL3-202ENST00000339255 OR2T33Q8NG76 320 aa13.07□□□□□ -0.32
NIPAL3-202ENST00000339255 SLC25A36Q96CQ1 311 aa13.07□□□□□ -0.32
NIPAL3-202ENST00000339255 ZNF570Q96NI8 536 aa13.07□□□□□ -0.32
NIPAL3-202ENST00000339255 SLC6A15Q9H2J7 730 aa13.07□□□□□ -0.32
NIPAL3-202ENST00000339255 LDAHQ9H6V9 325 aa13.07□□□□□ -0.32
NIPAL3-202ENST00000339255 EGLN3Q9H6Z9 239 aa13.07□□□□□ -0.32
NIPAL3-202ENST00000339255 MCCC2Q9HCC0 563 aa13.07□□□□□ -0.32
NIPAL3-202ENST00000339255 GMPPBQ9Y5P6 360 aa13.07□□□□□ -0.32
NIPAL3-202ENST00000339255 ZZEF1O43149 2961 aa13.07□□□□□ -0.32
NIPAL3-202ENST00000339255 LRRN3E7EW58 273 aa13.06□□□□□ -0.32
NIPAL3-202ENST00000339255 EPHA2P29317 976 aa13.06□□□□□ -0.32
NIPAL3-202ENST00000339255 SHC1P29353 583 aa13.06□□□□□ -0.32
NIPAL3-202ENST00000339255 GRPRP30550 384 aa13.06□□□□□ -0.32
NIPAL3-202ENST00000339255 GGT2P36268 569 aa13.06□□□□□ -0.32
NIPAL3-202ENST00000339255 POLR2IP36954 125 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms