RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 ST6GALNAC2Q9UJ37 374 aa13.5□□□□□ -0.25
PRKN-201ENST00000338468 FLVCR1Q9Y5Y0 555 aa13.5□□□□□ -0.25
PRKN-201ENST00000338468 FLNAP21333 2647 aaKnown RBP13.5□□□□□ -0.25
PRKN-201ENST00000338468 DNHD1Q96M86 4753 aa13.5□□□□□ -0.25
PRKN-201ENST00000338468 AQP7P3A6NL99 342 aa13.49□□□□□ -0.25
PRKN-201ENST00000338468 M0R3H8 397 aa13.49□□□□□ -0.25
PRKN-201ENST00000338468 FZD7O75084 574 aa13.49□□□□□ -0.25
PRKN-201ENST00000338468 GPIP06744 558 aa13.49□□□□□ -0.25
PRKN-201ENST00000338468 PPP3CBP16298 524 aa13.49□□□□□ -0.25
PRKN-201ENST00000338468 GYS2P54840 703 aa13.49□□□□□ -0.25
PRKN-201ENST00000338468 RGS8P57771 180 aaPredicted RBP13.49□□□□□ -0.25
PRKN-201ENST00000338468 P2RY6Q15077 328 aa13.49□□□□□ -0.25
PRKN-201ENST00000338468 NRF1Q16656 503 aa13.49□□□□□ -0.25
PRKN-201ENST00000338468 OTUD3Q5T2D3 398 aaPredicted RBP13.49□□□□□ -0.25
PRKN-201ENST00000338468 CCDC80Q76M96 950 aa13.49□□□□□ -0.25
PRKN-201ENST00000338468 SPATA21Q7Z572 469 aa13.49□□□□□ -0.25
PRKN-201ENST00000338468 SLC30A8Q8IWU4 369 aa13.49□□□□□ -0.25
PRKN-201ENST00000338468 ZIC4Q8N9L1 334 aa13.49□□□□□ -0.25
PRKN-201ENST00000338468 BHLHE22Q8NFJ8 381 aaPredicted RBP13.49□□□□□ -0.25
PRKN-201ENST00000338468 OR52E4Q8NGH9 312 aa13.49□□□□□ -0.25
PRKN-201ENST00000338468 RCN3Q96D15 328 aa13.49□□□□□ -0.25
PRKN-201ENST00000338468 KTI12Q96EK9 354 aaPredicted RBP13.49□□□□□ -0.25
PRKN-201ENST00000338468 ELAC2Q9BQ52 826 aaKnown RBP13.49□□□□□ -0.25
PRKN-201ENST00000338468 NAA11Q9BSU3 229 aaPredicted RBP13.49□□□□□ -0.25
PRKN-201ENST00000338468 TRIM2Q9C040 744 aa13.49□□□□□ -0.25
PRKN-201ENST00000338468 TESQ9UGI8 421 aaKnown RBP13.49□□□□□ -0.25
PRKN-201ENST00000338468 PLEKHA6Q9Y2H5 1048 aa13.49□□□□□ -0.25
PRKN-201ENST00000338468 NOSIPQ9Y314 301 aaKnown RBP13.49□□□□□ -0.25
PRKN-201ENST00000338468 A0A0B4J2E0 115 aa13.48□□□□□ -0.25
PRKN-201ENST00000338468 A0A1B0GX12 115 aa13.48□□□□□ -0.25
PRKN-201ENST00000338468 GPR171O14626 319 aa13.48□□□□□ -0.25
PRKN-201ENST00000338468 IGHV3-9P01782 118 aa13.48□□□□□ -0.25
PRKN-201ENST00000338468 FOSL1P15407 271 aa13.48□□□□□ -0.25
PRKN-201ENST00000338468 COX5AP20674 150 aa13.48□□□□□ -0.25
PRKN-201ENST00000338468 DRD4P21917 467 aa13.48□□□□□ -0.25
PRKN-201ENST00000338468 IGHV1-2P23083 117 aa13.48□□□□□ -0.25
PRKN-201ENST00000338468 FOXD4Q12950 439 aaPredicted RBP13.48□□□□□ -0.25
PRKN-201ENST00000338468 ITGADQ13349 1161 aa13.48□□□□□ -0.25
PRKN-201ENST00000338468 OR1Q1Q15612 314 aa13.48□□□□□ -0.25
PRKN-201ENST00000338468 ALG10BQ5I7T1 473 aa13.48□□□□□ -0.25
PRKN-201ENST00000338468 FBXW10Q5XX13 1052 aa13.48□□□□□ -0.25
PRKN-201ENST00000338468 FAM91A1Q658Y4 838 aa13.48□□□□□ -0.25
PRKN-201ENST00000338468 SEZ6L2Q6UXD5 910 aa13.48□□□□□ -0.25
PRKN-201ENST00000338468 PAMR1Q6UXH9 720 aa13.48□□□□□ -0.25
PRKN-201ENST00000338468 PATL1Q86TB9 770 aaKnown RBP13.48□□□□□ -0.25
PRKN-201ENST00000338468 TSPYL5Q86VY4 417 aaPredicted RBP13.48□□□□□ -0.25
PRKN-201ENST00000338468 RBM45Q8IUH3 476 aaKnown RBP13.48□□□□□ -0.25
PRKN-201ENST00000338468 P3H2Q8IVL5 708 aa13.48□□□□□ -0.25
PRKN-201ENST00000338468 ZNF100Q8IYN0 542 aa13.48□□□□□ -0.25
PRKN-201ENST00000338468 STEAP2Q8NFT2 490 aa13.48□□□□□ -0.25
PRKN-201ENST00000338468 OR9K2Q8NGE7 335 aa13.48□□□□□ -0.25
PRKN-201ENST00000338468 OR6T1Q8NGN1 323 aa13.48□□□□□ -0.25
PRKN-201ENST00000338468 KISS1RQ969F8 398 aaPredicted RBP13.48□□□□□ -0.25
PRKN-201ENST00000338468 SLC38A4Q969I6 547 aa13.48□□□□□ -0.25
PRKN-201ENST00000338468 PIK3IP1Q96FE7 263 aa13.48□□□□□ -0.25
PRKN-201ENST00000338468 SH3GL1Q99961 368 aa13.48□□□□□ -0.25
PRKN-201ENST00000338468 HDHD5Q9BXW7 423 aa13.48□□□□□ -0.25
PRKN-201ENST00000338468 MYLK2Q9H1R3 596 aa13.48□□□□□ -0.25
PRKN-201ENST00000338468 FANCFQ9NPI8 374 aa13.48□□□□□ -0.25
PRKN-201ENST00000338468 ADPRHL2Q9NX46 363 aa13.48□□□□□ -0.25
PRKN-201ENST00000338468 GMPR2Q9P2T1 348 aaKnown RBP13.48□□□□□ -0.25
PRKN-201ENST00000338468 RPS6KB2Q9UBS0 482 aa13.48□□□□□ -0.25
PRKN-201ENST00000338468 SEC14L4Q9UDX3 406 aa13.48□□□□□ -0.25
PRKN-201ENST00000338468 EDARQ9UNE0 448 aa13.48□□□□□ -0.25
PRKN-201ENST00000338468 A0A087WUJ7 227 aa13.47□□□□□ -0.25
PRKN-201ENST00000338468 ELOA3DA6NLF2 546 aaPredicted RBP13.47□□□□□ -0.25
PRKN-201ENST00000338468 CCT8L1PA6NM43 557 aa13.47□□□□□ -0.25
PRKN-201ENST00000338468 CCDC22O60826 627 aa13.47□□□□□ -0.25
PRKN-201ENST00000338468 LYZL6O75951 148 aa13.47□□□□□ -0.25
PRKN-201ENST00000338468 ATE1O95260 518 aa13.47□□□□□ -0.25
PRKN-201ENST00000338468 LYPD3O95274 346 aa13.47□□□□□ -0.25
PRKN-201ENST00000338468 AHSA1O95433 338 aa13.47□□□□□ -0.25
PRKN-201ENST00000338468 CNOT4O95628 575 aaKnown RBP13.47□□□□□ -0.25
PRKN-201ENST00000338468 THY1P04216 161 aa13.47□□□□□ -0.25
PRKN-201ENST00000338468 C8BP07358 591 aa13.47□□□□□ -0.25
PRKN-201ENST00000338468 COX4I1P13073 169 aa13.47□□□□□ -0.25
PRKN-201ENST00000338468 LSP1P33241 339 aa13.47□□□□□ -0.25
PRKN-201ENST00000338468 RPS5P46782 204 aaKnown RBP13.47□□□□□ -0.25
PRKN-201ENST00000338468 FOXG1P55316 489 aaPredicted RBP13.47□□□□□ -0.25
PRKN-201ENST00000338468 TAB1Q15750 504 aa13.47□□□□□ -0.25
PRKN-201ENST00000338468 ELOA3BQ3SY89 546 aa13.47□□□□□ -0.25
PRKN-201ENST00000338468 FBXW9Q5XUX1 488 aa13.47□□□□□ -0.25
PRKN-201ENST00000338468 ULK3Q6PHR2 472 aa13.47□□□□□ -0.25
PRKN-201ENST00000338468 WFDC8Q8IUA0 241 aa13.47□□□□□ -0.25
PRKN-201ENST00000338468 PCYOX1LQ8NBM8 494 aa13.47□□□□□ -0.25
PRKN-201ENST00000338468 ELOA3Q8NG57 546 aa13.47□□□□□ -0.25
PRKN-201ENST00000338468 MFSD8Q8NHS3 518 aa13.47□□□□□ -0.25
PRKN-201ENST00000338468 RP9Q8TA86 221 aaKnown RBP13.47□□□□□ -0.25
PRKN-201ENST00000338468 DNAJA4Q8WW22 397 aaPredicted RBP13.47□□□□□ -0.25
PRKN-201ENST00000338468 TAAR8Q969N4 342 aa13.47□□□□□ -0.25
PRKN-201ENST00000338468 APH1AQ96BI3 265 aa13.47□□□□□ -0.25
PRKN-201ENST00000338468 ZNF385AQ96PM9 386 aaKnown RBP13.47□□□□□ -0.25
PRKN-201ENST00000338468 ECSITQ9BQ95 431 aa13.47□□□□□ -0.25
PRKN-201ENST00000338468 SF3B5Q9BWJ5 86 aaKnown RBP13.47□□□□□ -0.25
PRKN-201ENST00000338468 GSX1Q9H4S2 264 aaPredicted RBP13.47□□□□□ -0.25
PRKN-201ENST00000338468 EVA1AQ9H8M9 152 aa13.47□□□□□ -0.25
PRKN-201ENST00000338468 DLL4Q9NR61 685 aa13.47□□□□□ -0.25
PRKN-201ENST00000338468 GID8Q9NWU2 228 aa13.47□□□□□ -0.25
PRKN-201ENST00000338468 CMTM6Q9NX76 183 aa13.47□□□□□ -0.25
PRKN-201ENST00000338468 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms