RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 LNX2Q8N448 690 aa13.31□□□□□ -0.28
CDK5RAP3-201ENST00000338399 OR2M7Q8NG81 312 aa13.31□□□□□ -0.28
CDK5RAP3-201ENST00000338399 SNIP1Q8TAD8 396 aaKnown RBP13.31□□□□□ -0.28
CDK5RAP3-201ENST00000338399 HIST1H2ACQ93077 130 aa13.31□□□□□ -0.28
CDK5RAP3-201ENST00000338399 PLEKHA8Q96JA3 519 aa13.31□□□□□ -0.28
CDK5RAP3-201ENST00000338399 FAM173AQ9BQD7 235 aa13.31□□□□□ -0.28
CDK5RAP3-201ENST00000338399 RHNO1Q9BSD3 238 aa13.31□□□□□ -0.28
CDK5RAP3-201ENST00000338399 TMEM185BQ9H7F4 350 aa13.31□□□□□ -0.28
CDK5RAP3-201ENST00000338399 SCN3BQ9NY72 215 aa13.31□□□□□ -0.28
CDK5RAP3-201ENST00000338399 DNAJC27Q9NZQ0 273 aa13.31□□□□□ -0.28
CDK5RAP3-201ENST00000338399 BLOC1S6Q9UL45 172 aa13.31□□□□□ -0.28
CDK5RAP3-201ENST00000338399 HIF3AQ9Y2N7 669 aa13.31□□□□□ -0.28
CDK5RAP3-201ENST00000338399 KCNMB2Q9Y691 235 aa13.31□□□□□ -0.28
CDK5RAP3-201ENST00000338399 MED12Q93074 2177 aa13.31□□□□□ -0.28
CDK5RAP3-201ENST00000338399 CDK2AP1O14519 115 aa13.31□□□□□ -0.28
CDK5RAP3-201ENST00000338399 OR2T1O43869 369 aa13.31□□□□□ -0.28
CDK5RAP3-201ENST00000338399 ENTPD6O75354 484 aa13.31□□□□□ -0.28
CDK5RAP3-201ENST00000338399 MT-ATP6P00846 226 aa13.31□□□□□ -0.28
CDK5RAP3-201ENST00000338399 SP1P08047 785 aa13.31□□□□□ -0.28
CDK5RAP3-201ENST00000338399 SRD5A2P31213 254 aa13.31□□□□□ -0.28
CDK5RAP3-201ENST00000338399 GRK5P34947 590 aa13.31□□□□□ -0.28
CDK5RAP3-201ENST00000338399 RPL4P36578 427 aaKnown RBP13.31□□□□□ -0.28
CDK5RAP3-201ENST00000338399 MAP2K6P52564 334 aa13.31□□□□□ -0.28
CDK5RAP3-201ENST00000338399 PRPS1P60891 318 aa13.31□□□□□ -0.28
CDK5RAP3-201ENST00000338399 TEKQ02763 1124 aa13.31□□□□□ -0.28
CDK5RAP3-201ENST00000338399 PIGFQ07326 219 aa13.31□□□□□ -0.28
CDK5RAP3-201ENST00000338399 FOXO1Q12778 655 aa13.31□□□□□ -0.28
CDK5RAP3-201ENST00000338399 APOFQ13790 326 aa13.31□□□□□ -0.28
CDK5RAP3-201ENST00000338399 SYT14P1Q58G82 188 aa13.31□□□□□ -0.28
CDK5RAP3-201ENST00000338399 RAET1LQ5VY80 246 aa13.31□□□□□ -0.28
CDK5RAP3-201ENST00000338399 SLC6A19Q695T7 634 aa13.31□□□□□ -0.28
CDK5RAP3-201ENST00000338399 C3orf33Q6P1S2 294 aa13.31□□□□□ -0.28
CDK5RAP3-201ENST00000338399 MAMDC2Q7Z304 686 aaPredicted RBP13.31□□□□□ -0.28
CDK5RAP3-201ENST00000338399 NANOGNBQ7Z5D8 188 aa13.31□□□□□ -0.28
CDK5RAP3-201ENST00000338399 FAM26EQ8N5C1 309 aa13.31□□□□□ -0.28
CDK5RAP3-201ENST00000338399 ZNF540Q8NDQ6 660 aa13.31□□□□□ -0.28
CDK5RAP3-201ENST00000338399 MDS2Q8NDY4 140 aa13.31□□□□□ -0.28
CDK5RAP3-201ENST00000338399 TMEM163Q8TC26 289 aa13.31□□□□□ -0.28
CDK5RAP3-201ENST00000338399 HAS2Q92819 552 aa13.31□□□□□ -0.28
CDK5RAP3-201ENST00000338399 MRPS26Q9BYN8 205 aaKnown RBP13.31□□□□□ -0.28
CDK5RAP3-201ENST00000338399 RNF32Q9H0A6 362 aa13.31□□□□□ -0.28
CDK5RAP3-201ENST00000338399 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.31□□□□□ -0.28
CDK5RAP3-201ENST00000338399 ZFP64Q9NPA5 681 aa13.31□□□□□ -0.28
CDK5RAP3-201ENST00000338399 PAK1IP1Q9NWT1 392 aaPredicted RBP13.31□□□□□ -0.28
CDK5RAP3-201ENST00000338399 SEC14L4Q9UDX3 406 aa13.31□□□□□ -0.28
CDK5RAP3-201ENST00000338399 BOKQ9UMX3 212 aaPredicted RBP13.31□□□□□ -0.28
CDK5RAP3-201ENST00000338399 TPRKBQ9Y3C4 175 aa13.31□□□□□ -0.28
CDK5RAP3-201ENST00000338399 GRPRP30550 384 aa13.3□□□□□ -0.28
CDK5RAP3-201ENST00000338399 UQCRC1P31930 480 aa13.3□□□□□ -0.28
CDK5RAP3-201ENST00000338399 FOXK2Q01167 660 aa13.3□□□□□ -0.28
CDK5RAP3-201ENST00000338399 RPL18Q07020 188 aaKnown RBP13.3□□□□□ -0.28
CDK5RAP3-201ENST00000338399 SELENBP1Q13228 472 aa13.3□□□□□ -0.28
CDK5RAP3-201ENST00000338399 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.3□□□□□ -0.282e-6■□□□□ 11.2
CDK5RAP3-201ENST00000338399 SLC25A25Q6KCM7 469 aa13.3□□□□□ -0.28
CDK5RAP3-201ENST00000338399 YRDCQ86U90 279 aaKnown RBP13.3□□□□□ -0.28
CDK5RAP3-201ENST00000338399 SLC43A2Q8N370 569 aa13.3□□□□□ -0.28
CDK5RAP3-201ENST00000338399 LRR1Q96L50 414 aa13.3□□□□□ -0.28
CDK5RAP3-201ENST00000338399 ERMAPQ96PL5 475 aaPredicted RBP13.3□□□□□ -0.28
CDK5RAP3-201ENST00000338399 POTEKPQ9BYX7 375 aa13.3□□□□□ -0.28
CDK5RAP3-201ENST00000338399 BAIAP2Q9UQB8 552 aa13.3□□□□□ -0.28
CDK5RAP3-201ENST00000338399 SPIN1Q9Y657 262 aaPredicted RBP13.3□□□□□ -0.28
CDK5RAP3-201ENST00000338399 A0A087WXM4 84 aa13.29□□□□□ -0.28
CDK5RAP3-201ENST00000338399 OR2M5A3KFT3 312 aa13.29□□□□□ -0.28
CDK5RAP3-201ENST00000338399 FTCDNL1E5RQL4 147 aa13.29□□□□□ -0.28
CDK5RAP3-201ENST00000338399 CLPTM1O96005 669 aa13.29□□□□□ -0.28
CDK5RAP3-201ENST00000338399 IMPDH2P12268 514 aa13.29□□□□□ -0.28
CDK5RAP3-201ENST00000338399 GDF1P27539 372 aa13.29□□□□□ -0.28
CDK5RAP3-201ENST00000338399 SFTPDP35247 375 aa13.29□□□□□ -0.28
CDK5RAP3-201ENST00000338399 RFC3P40938 356 aa13.29□□□□□ -0.28
CDK5RAP3-201ENST00000338399 GABARAPL2P60520 117 aa13.29□□□□□ -0.28
CDK5RAP3-201ENST00000338399 CSNK2BP67870 215 aa13.29□□□□□ -0.28
CDK5RAP3-201ENST00000338399 OR7A5Q15622 319 aa13.29□□□□□ -0.28
CDK5RAP3-201ENST00000338399 OCLNQ16625 522 aa13.29□□□□□ -0.28
CDK5RAP3-201ENST00000338399 TMEM44Q2T9K0 475 aa13.29□□□□□ -0.28
CDK5RAP3-201ENST00000338399 ANKDD1AQ495B1 522 aa13.29□□□□□ -0.28
CDK5RAP3-201ENST00000338399 ALG10Q5BKT4 473 aa13.29□□□□□ -0.28
CDK5RAP3-201ENST00000338399 TMEM201Q5SNT2 666 aa13.29□□□□□ -0.28
CDK5RAP3-201ENST00000338399 DPY19L2P2Q6ZN68 376 aa13.29□□□□□ -0.28
CDK5RAP3-201ENST00000338399 GALNTL5Q7Z4T8 443 aa13.29□□□□□ -0.28
CDK5RAP3-201ENST00000338399 OR5J2Q8NH18 312 aa13.29□□□□□ -0.28
CDK5RAP3-201ENST00000338399 Q96MT0 163 aa13.29□□□□□ -0.28
CDK5RAP3-201ENST00000338399 PLCXD1Q9NUJ7 323 aa13.29□□□□□ -0.28
CDK5RAP3-201ENST00000338399 ADAM18Q9Y3Q7 739 aa13.29□□□□□ -0.28
CDK5RAP3-201ENST00000338399 IER3IP1Q9Y5U9 82 aa13.29□□□□□ -0.28
CDK5RAP3-201ENST00000338399 SH3D21A4FU49 640 aa13.29□□□□□ -0.28
CDK5RAP3-201ENST00000338399 NME2P1O60361 137 aa13.29□□□□□ -0.28
CDK5RAP3-201ENST00000338399 TRAPPC6AO75865 159 aa13.29□□□□□ -0.28
CDK5RAP3-201ENST00000338399 F13BP05160 661 aa13.29□□□□□ -0.28
CDK5RAP3-201ENST00000338399 TSPAN19P0C672 248 aa13.29□□□□□ -0.28
CDK5RAP3-201ENST00000338399 CD46P15529 392 aa13.29□□□□□ -0.28
CDK5RAP3-201ENST00000338399 NME2P22392 152 aa13.29□□□□□ -0.28
CDK5RAP3-201ENST00000338399 SHC1P29353 583 aa13.29□□□□□ -0.28
CDK5RAP3-201ENST00000338399 NOS3P29474 1203 aa13.29□□□□□ -0.28
CDK5RAP3-201ENST00000338399 IDUAP35475 653 aa13.29□□□□□ -0.28
CDK5RAP3-201ENST00000338399 ERVK-25P63136 954 aa13.29□□□□□ -0.28
CDK5RAP3-201ENST00000338399 SLC35A2P78381 396 aa13.29□□□□□ -0.28
CDK5RAP3-201ENST00000338399 C19orf57Q0VDD7 668 aa13.29□□□□□ -0.28
CDK5RAP3-201ENST00000338399 SGCBQ16585 318 aa13.29□□□□□ -0.28
CDK5RAP3-201ENST00000338399 TMEM176BQ3YBM2 270 aaPredicted RBP13.29□□□□□ -0.28
CDK5RAP3-201ENST00000338399 SLC25A30Q5SVS4 291 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms