RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 AGERQ15109 404 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 LRRN1Q6UXK5 716 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 RNASE11Q8TAA1 199 aaKnown RBP5.8□□□□□ -1.48
PRKDC-202ENST00000338368 INTS14Q96SY0 518 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 ZNF350Q9GZX5 532 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 MGAMO43451 1857 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 NKX2-2O95096 273 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 ATP1B1P05026 303 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 CAPZBP47756 277 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 DPY19L2P2Q6ZN68 376 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 ZNF511Q8NB15 262 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 FOXN4Q96NZ1 517 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 RBM34P42696 430 aaKnown RBP5.8□□□□□ -1.48
PRKDC-202ENST00000338368 ART1P52961 327 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 FAM69AQ5T7M9 428 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 EEF1A1P5Q5VTE0 462 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 ZNF431Q8TF32 576 aaPredicted RBP5.8□□□□□ -1.48
PRKDC-202ENST00000338368 CSF3RQ99062 836 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 PCDHGB2Q9Y5G2 931 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 ZC3H12DA2A288 527 aaKnown RBP5.8□□□□□ -1.48
PRKDC-202ENST00000338368 C2orf72A6NCS6 295 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 L7N2F9 121 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 NRG2O14511 850 aaPredicted RBP5.8□□□□□ -1.48
PRKDC-202ENST00000338368 CD3GP09693 182 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 OTX2P32243 289 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 RPL19P84098 196 aaKnown RBP5.8□□□□□ -1.48
PRKDC-202ENST00000338368 CTF1Q16619 201 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 FCRL6Q6DN72 434 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 WDR77Q9BQA1 342 aaPredicted RBP5.8□□□□□ -1.48
PRKDC-202ENST00000338368 NXF5Q9H1B4 397 aaKnown RBP5.8□□□□□ -1.48
PRKDC-202ENST00000338368 CORINQ9Y5Q5 1042 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 TRAV36DV7A0A075B6V5 113 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 IGHV3-20A0A0C4DH32 117 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 CDHR4A6H8M9 788 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 P2RX6O15547 441 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 FARS2O95363 451 aaKnown RBP5.8□□□□□ -1.48
PRKDC-202ENST00000338368 FUCA1P04066 466 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 DRD5P21918 477 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 POU3F1Q03052 451 aaPredicted RBP5.8□□□□□ -1.48
PRKDC-202ENST00000338368 C17orf67Q0P5P2 114 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 NKAIN1Q4KMZ8 207 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 OR7E24Q6IFN5 339 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 TPRA1Q86W33 373 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 TMEM17Q86X19 198 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 SLC43A2Q8N370 569 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 ZNF69Q9UC07 566 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 NUFIP1Q9UHK0 495 aaKnown RBP5.8□□□□□ -1.48
PRKDC-202ENST00000338368 GPR55Q9Y2T6 319 aaPredicted RBP5.8□□□□□ -1.48
PRKDC-202ENST00000338368 TMED7-TICAM2A0A0A6YYA0 188 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 MISPQ8IVT2 679 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.8□□□□□ -1.48
PRKDC-202ENST00000338368 OR4C15Q8NGM1 316 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 ZNF764Q96H86 408 aaPredicted RBP5.8□□□□□ -1.48
PRKDC-202ENST00000338368 TMEM246Q9BRR3 403 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 THAP7Q9BT49 309 aaPredicted RBP5.8□□□□□ -1.48
PRKDC-202ENST00000338368 FAM60AQ9NP50 221 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 C2orf42Q9NWW7 574 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 RPH3AQ9Y2J0 694 aaPredicted RBP5.8□□□□□ -1.48
PRKDC-202ENST00000338368 MRPS2Q9Y399 296 aaKnown RBP5.8□□□□□ -1.48
PRKDC-202ENST00000338368 TMED7Q9Y3B3 224 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 HSPB11Q9Y547 144 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 SULT2B1O00204 365 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 ADAM23O75077 832 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 ITGA3P26006 1051 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 HSF2Q03933 536 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 KCNAB1Q14722 419 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 OR8S1Q8NH09 359 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 OR14A16Q8NHC5 309 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 SPINT1O43278 529 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 ALOX12BO75342 701 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 OR8G3PP0DMU2 310 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 TRIM61Q5EBN2 209 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 LYSMD2Q8IV50 215 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 ATOH1Q92858 354 aaPredicted RBP5.8□□□□□ -1.48
PRKDC-202ENST00000338368 ARHGAP9Q9BRR9 750 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 ALG12Q9BV10 488 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 FGF20Q9NP95 211 aaPredicted RBP5.8□□□□□ -1.48
PRKDC-202ENST00000338368 MRPL15Q9P015 296 aaKnown RBP5.8□□□□□ -1.48
PRKDC-202ENST00000338368 ADAM18Q9Y3Q7 739 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 DOCK11Q5JSL3 2073 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 TMEM72A0PK05 275 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 NOTOA8MTQ0 251 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 H7C1C5 153 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 M0R082 166 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 SIGLEC6O43699 453 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 LCN6P62502 163 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 UBE3DQ7Z6J8 389 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 BBS1Q8NFJ9 593 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 OR14L1PQ8NHC6 308 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 C16orf52Q8NHV5 167 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 PGAM5Q96HS1 289 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 TMEM165Q9HC07 324 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 SCP2D1Q9UJQ7 156 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 PCOLCE2Q9UKZ9 415 aa5.8□□□□□ -1.48
PRKDC-202ENST00000338368 DCDC2BA2VCK2 349 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 GTF2F2P13984 249 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 GLB1P16278 677 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 PTPN6P29350 595 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 DAP3P51398 398 aaKnown RBP5.79□□□□□ -1.48
PRKDC-202ENST00000338368 POLR2HP52434 150 aaKnown RBP5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms