RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 TSSK2Q96PF2 358 aa11.3□□□□□ -0.6
VPS33B-201ENST00000333371 OR2M2Q96R28 347 aa11.3□□□□□ -0.6
VPS33B-201ENST00000333371 TSPAN10Q9H1Z9 355 aaPredicted RBP11.3□□□□□ -0.6
VPS33B-201ENST00000333371 OR10A4Q9H209 315 aa11.3□□□□□ -0.6
VPS33B-201ENST00000333371 DLL4Q9NR61 685 aa11.3□□□□□ -0.6
VPS33B-201ENST00000333371 DNAJB12Q9NXW2 375 aaKnown RBP11.3□□□□□ -0.6
VPS33B-201ENST00000333371 B3GNT2Q9NY97 397 aa11.3□□□□□ -0.6
VPS33B-201ENST00000333371 CHRNA9Q9UGM1 479 aa11.3□□□□□ -0.6
VPS33B-201ENST00000333371 SATB2Q9UPW6 733 aa11.3□□□□□ -0.6
VPS33B-201ENST00000333371 OR6C68A6NDL8 312 aa11.3□□□□□ -0.6
VPS33B-201ENST00000333371 G3V3Q6 166 aa11.3□□□□□ -0.6
VPS33B-201ENST00000333371 OGG1O15527 345 aa11.3□□□□□ -0.6
VPS33B-201ENST00000333371 DNASE1P24855 282 aa11.3□□□□□ -0.6
VPS33B-201ENST00000333371 RPL4P36578 427 aaKnown RBP11.3□□□□□ -0.6
VPS33B-201ENST00000333371 MAP3K8P41279 467 aa11.3□□□□□ -0.6
VPS33B-201ENST00000333371 VEGFCP49767 419 aa11.3□□□□□ -0.6
VPS33B-201ENST00000333371 TRAM1Q15629 374 aa11.3□□□□□ -0.6
VPS33B-201ENST00000333371 ZNF542PQ5EBM4 170 aa11.3□□□□□ -0.6
VPS33B-201ENST00000333371 ZNF613Q6PF04 617 aa11.3□□□□□ -0.6
VPS33B-201ENST00000333371 ABHD13Q7L211 337 aa11.3□□□□□ -0.6
VPS33B-201ENST00000333371 SAMD14Q8IZD0 417 aaPredicted RBP11.3□□□□□ -0.6
VPS33B-201ENST00000333371 OR2T4Q8NH00 348 aa11.3□□□□□ -0.6
VPS33B-201ENST00000333371 OR52I2Q8NH67 350 aa11.3□□□□□ -0.6
VPS33B-201ENST00000333371 ADAMTS14Q8WXS8 1223 aa11.3□□□□□ -0.6
VPS33B-201ENST00000333371 FAM131CQ96AQ9 280 aa11.3□□□□□ -0.6
VPS33B-201ENST00000333371 DNAJA3Q96EY1 480 aa11.3□□□□□ -0.6
VPS33B-201ENST00000333371 CNN2Q99439 309 aaKnown RBP11.3□□□□□ -0.6
VPS33B-201ENST00000333371 ZFYVE21Q9BQ24 234 aa11.3□□□□□ -0.6
VPS33B-201ENST00000333371 SPRTNQ9H040 489 aaPredicted RBP11.3□□□□□ -0.6
VPS33B-201ENST00000333371 C20orf85Q9H1P6 137 aa11.3□□□□□ -0.6
VPS33B-201ENST00000333371 RANBP3Q9H6Z4 567 aaPredicted RBP11.3□□□□□ -0.6
VPS33B-201ENST00000333371 METTL17Q9H7H0 456 aaPredicted RBP11.3□□□□□ -0.6
VPS33B-201ENST00000333371 SYNDIG1Q9H7V2 258 aa11.3□□□□□ -0.6
VPS33B-201ENST00000333371 PCDHGA9Q9Y5G4 932 aaKnown RBP11.3□□□□□ -0.6
VPS33B-201ENST00000333371 RPP14O95059 124 aaKnown RBP11.29□□□□□ -0.6
VPS33B-201ENST00000333371 TPOP07202 933 aa11.29□□□□□ -0.6
VPS33B-201ENST00000333371 UCHL1P09936 223 aa11.29□□□□□ -0.6
VPS33B-201ENST00000333371 CD53P19397 219 aa11.29□□□□□ -0.6
VPS33B-201ENST00000333371 PGDP52209 483 aa11.29□□□□□ -0.6
VPS33B-201ENST00000333371 GBX2P52951 348 aaPredicted RBP11.29□□□□□ -0.6
VPS33B-201ENST00000333371 ERVK-25P63136 954 aa11.29□□□□□ -0.6
VPS33B-201ENST00000333371 EXOSC2Q13868 293 aaKnown RBP11.29□□□□□ -0.6
VPS33B-201ENST00000333371 ERV3-1Q14264 604 aa11.29□□□□□ -0.6
VPS33B-201ENST00000333371 HSD17B12Q53GQ0 312 aa11.29□□□□□ -0.6
VPS33B-201ENST00000333371 OTPQ5XKR4 325 aa11.29□□□□□ -0.6
VPS33B-201ENST00000333371 ARHGAP11AQ6P4F7 1023 aa11.29□□□□□ -0.6
VPS33B-201ENST00000333371 ZNF782Q6ZMW2 699 aaPredicted RBP11.29□□□□□ -0.6
VPS33B-201ENST00000333371 FCRLAQ7L513 359 aa11.29□□□□□ -0.6
VPS33B-201ENST00000333371 LUZP2Q86TE4 346 aa11.29□□□□□ -0.6
VPS33B-201ENST00000333371 OR11G2Q8NGC1 345 aa11.29□□□□□ -0.6
VPS33B-201ENST00000333371 OR9A4Q8NGU2 314 aa11.29□□□□□ -0.6
VPS33B-201ENST00000333371 OR2T35Q8NGX2 323 aa11.29□□□□□ -0.6
VPS33B-201ENST00000333371 RPLP0P6Q8NHW5 317 aa11.29□□□□□ -0.6
VPS33B-201ENST00000333371 ANKRD9Q96BM1 317 aaPredicted RBP11.29□□□□□ -0.6
VPS33B-201ENST00000333371 SCARF2Q96GP6 870 aaPredicted RBP11.29□□□□□ -0.6
VPS33B-201ENST00000333371 HSPA12BQ96MM6 686 aa11.29□□□□□ -0.6
VPS33B-201ENST00000333371 SEC22CQ9BRL7 303 aa11.29□□□□□ -0.6
VPS33B-201ENST00000333371 HAO2Q9NYQ3 351 aa11.29□□□□□ -0.6
VPS33B-201ENST00000333371 NCDNQ9UBB6 729 aa11.29□□□□□ -0.6
VPS33B-201ENST00000333371 PCNX3Q9H6A9 2034 aa11.29□□□□□ -0.6
VPS33B-201ENST00000333371 TRAV1-2A0A0B4J238 106 aa11.29□□□□□ -0.6
VPS33B-201ENST00000333371 A0A1B0GTH9 108 aa11.29□□□□□ -0.6
VPS33B-201ENST00000333371 IFNGP01579 166 aa11.29□□□□□ -0.6
VPS33B-201ENST00000333371 SULT1A3P0DMM9 295 aa11.29□□□□□ -0.6
VPS33B-201ENST00000333371 SULT1A4P0DMN0 295 aa11.29□□□□□ -0.6
VPS33B-201ENST00000333371 DRD1P21728 446 aa11.29□□□□□ -0.6
VPS33B-201ENST00000333371 ACTC1P68032 377 aa11.29□□□□□ -0.6
VPS33B-201ENST00000333371 ACTA1P68133 377 aa11.29□□□□□ -0.6
VPS33B-201ENST00000333371 RPL6Q02878 288 aaKnown RBP11.29□□□□□ -0.6
VPS33B-201ENST00000333371 ANGPT1Q15389 498 aa11.29□□□□□ -0.6
VPS33B-201ENST00000333371 FAM199XQ6PEV8 388 aaPredicted RBP11.29□□□□□ -0.6
VPS33B-201ENST00000333371 BTN2A1Q7KYR7 527 aa11.29□□□□□ -0.6
VPS33B-201ENST00000333371 CA13Q8N1Q1 262 aa11.29□□□□□ -0.6
VPS33B-201ENST00000333371 GATSQ8NAP1 163 aa11.29□□□□□ -0.6
VPS33B-201ENST00000333371 CAMKVQ8NCB2 501 aa11.29□□□□□ -0.6
VPS33B-201ENST00000333371 ANGPTL6Q8NI99 470 aa11.29□□□□□ -0.6
VPS33B-201ENST00000333371 RGP1Q92546 391 aaPredicted RBP11.29□□□□□ -0.6
VPS33B-201ENST00000333371 RERGQ96A58 199 aaPredicted RBP11.29□□□□□ -0.6
VPS33B-201ENST00000333371 SLC25A38Q96DW6 304 aa11.29□□□□□ -0.6
VPS33B-201ENST00000333371 SPACA7Q96KW9 195 aa11.29□□□□□ -0.6
VPS33B-201ENST00000333371 MRGPRX1Q96LB2 322 aa11.29□□□□□ -0.6
VPS33B-201ENST00000333371 BMFQ96LC9 184 aa11.29□□□□□ -0.6
VPS33B-201ENST00000333371 WDR92Q96MX6 357 aa11.29□□□□□ -0.6
VPS33B-201ENST00000333371 STACQ99469 402 aa11.29□□□□□ -0.6
VPS33B-201ENST00000333371 ZNF426Q9BUY5 554 aa11.29□□□□□ -0.6
VPS33B-201ENST00000333371 TCEAL2Q9H3H9 227 aaPredicted RBP11.29□□□□□ -0.6
VPS33B-201ENST00000333371 SPATA2Q9UM82 520 aa11.29□□□□□ -0.6
VPS33B-201ENST00000333371 CAMK2AQ9UQM7 478 aa11.29□□□□□ -0.6
VPS33B-201ENST00000333371 A0A087WV62 115 aa11.28□□□□□ -0.6
VPS33B-201ENST00000333371 MEIKINA0A087WXM9 373 aa11.28□□□□□ -0.6
VPS33B-201ENST00000333371 TGFBR3LH3BV60 316 aa11.28□□□□□ -0.6
VPS33B-201ENST00000333371 OR10H2O60403 315 aa11.28□□□□□ -0.6
VPS33B-201ENST00000333371 FMO6PO60774 539 aa11.28□□□□□ -0.6
VPS33B-201ENST00000333371 FCER2P06734 321 aa11.28□□□□□ -0.6
VPS33B-201ENST00000333371 CELA2BP08218 269 aaPredicted RBP11.28□□□□□ -0.6
VPS33B-201ENST00000333371 SRMP19623 302 aa11.28□□□□□ -0.6
VPS33B-201ENST00000333371 KIAA1024LP59773 190 aa11.28□□□□□ -0.6
VPS33B-201ENST00000333371 NFATC4Q14934 902 aa11.28□□□□□ -0.6
VPS33B-201ENST00000333371 KIR2DS3Q14952 304 aa11.28□□□□□ -0.6
VPS33B-201ENST00000333371 TEX19Q8NA77 164 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms