RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 BEST4Q8NFU0 473 aa12.03□□□□□ -0.48
VSTM4-202ENST00000332853 BAHD1Q8TBE0 780 aaPredicted RBP12.03□□□□□ -0.48
VSTM4-202ENST00000332853 CCDC74AQ96AQ1 378 aa12.03□□□□□ -0.48
VSTM4-202ENST00000332853 CSF3RQ99062 836 aa12.03□□□□□ -0.48
VSTM4-202ENST00000332853 ARL6Q9H0F7 186 aa12.03□□□□□ -0.48
VSTM4-202ENST00000332853 ZNF700Q9H0M5 742 aa12.03□□□□□ -0.48
VSTM4-202ENST00000332853 UBQLN3Q9H347 655 aa12.03□□□□□ -0.48
VSTM4-202ENST00000332853 GIFP27352 417 aa12.02□□□□□ -0.48
VSTM4-202ENST00000332853 HTR1FP30939 366 aa12.02□□□□□ -0.48
VSTM4-202ENST00000332853 ACSM5Q6NUN0 579 aa12.02□□□□□ -0.48
VSTM4-202ENST00000332853 DPY19L4Q7Z388 723 aa12.02□□□□□ -0.48
VSTM4-202ENST00000332853 C7orf34Q96L11 122 aa12.02□□□□□ -0.48
VSTM4-202ENST00000332853 SLC46A1Q96NT5 459 aa12.02□□□□□ -0.48
VSTM4-202ENST00000332853 MGAT4AQ9UM21 535 aa12.02□□□□□ -0.48
VSTM4-202ENST00000332853 DIMT1Q9UNQ2 313 aaKnown RBP12.02□□□□□ -0.48
VSTM4-202ENST00000332853 ARPC1BO15143 372 aaKnown RBP12.02□□□□□ -0.48
VSTM4-202ENST00000332853 EPHA2P29317 976 aa12.02□□□□□ -0.48
VSTM4-202ENST00000332853 UQCRC1P31930 480 aa12.02□□□□□ -0.48
VSTM4-202ENST00000332853 UGT2B10P36537 528 aa12.02□□□□□ -0.48
VSTM4-202ENST00000332853 RAE1P78406 368 aaKnown RBP12.02□□□□□ -0.48
VSTM4-202ENST00000332853 AGBL5Q8NDL9 886 aa12.02□□□□□ -0.48
VSTM4-202ENST00000332853 ZNF281Q9Y2X9 895 aa12.02□□□□□ -0.48
VSTM4-202ENST00000332853 A0A087WUU8 490 aa12.02□□□□□ -0.49
VSTM4-202ENST00000332853 S100A6P06703 90 aa12.02□□□□□ -0.49
VSTM4-202ENST00000332853 ETV5P41161 510 aa12.02□□□□□ -0.49
VSTM4-202ENST00000332853 ETV1P50549 477 aa12.02□□□□□ -0.49
VSTM4-202ENST00000332853 UBE2NP61088 152 aaKnown RBP12.02□□□□□ -0.49
VSTM4-202ENST00000332853 SF3A2Q15428 464 aaKnown RBP12.02□□□□□ -0.49
VSTM4-202ENST00000332853 ARHGAP11BQ3KRB8 267 aa12.02□□□□□ -0.49
VSTM4-202ENST00000332853 GPR139Q6DWJ6 353 aa12.02□□□□□ -0.49
VSTM4-202ENST00000332853 LINC00346Q8IVM7 164 aa12.02□□□□□ -0.49
VSTM4-202ENST00000332853 SLC35F3Q8IY50 421 aa12.02□□□□□ -0.49
VSTM4-202ENST00000332853 ZSCAN4Q8NAM6 433 aaPredicted RBP12.02□□□□□ -0.49
VSTM4-202ENST00000332853 NINJ1Q92982 152 aa12.02□□□□□ -0.49
VSTM4-202ENST00000332853 CD34P28906 385 aa12.02□□□□□ -0.49
VSTM4-202ENST00000332853 EIF5AP63241 154 aaKnown RBP12.02□□□□□ -0.49
VSTM4-202ENST00000332853 HTRA4P83105 476 aaPredicted RBP12.02□□□□□ -0.49
VSTM4-202ENST00000332853 ZSCAN1Q8NBB4 408 aa12.02□□□□□ -0.49
VSTM4-202ENST00000332853 OR5H2Q8NGV7 314 aa12.02□□□□□ -0.49
VSTM4-202ENST00000332853 RHNO1Q9BSD3 238 aa12.02□□□□□ -0.49
VSTM4-202ENST00000332853 MED17Q9NVC6 651 aa12.02□□□□□ -0.49
VSTM4-202ENST00000332853 PRR35P0CG20 571 aa12.02□□□□□ -0.49
VSTM4-202ENST00000332853 GABRR1P24046 479 aa12.02□□□□□ -0.49
VSTM4-202ENST00000332853 MSX1P28360 303 aa12.02□□□□□ -0.49
VSTM4-202ENST00000332853 CSNK2A1P68400 391 aaPredicted RBP12.02□□□□□ -0.49
VSTM4-202ENST00000332853 TSSK4Q6SA08 328 aa12.02□□□□□ -0.49
VSTM4-202ENST00000332853 PM20D2Q8IYS1 436 aa12.02□□□□□ -0.49
VSTM4-202ENST00000332853 DNAJC5GQ8N7S2 189 aa12.02□□□□□ -0.49
VSTM4-202ENST00000332853 CLEC1AQ8NC01 280 aa12.02□□□□□ -0.49
VSTM4-202ENST00000332853 CSNK2A3Q8NEV1 391 aa12.02□□□□□ -0.49
VSTM4-202ENST00000332853 WASH6PQ9NQA3 447 aa12.02□□□□□ -0.49
VSTM4-202ENST00000332853 NUDT21O43809 227 aaKnown RBP12.01□□□□□ -0.49
VSTM4-202ENST00000332853 MTRF1O75570 445 aaKnown RBP12.01□□□□□ -0.49
VSTM4-202ENST00000332853 IGHG1P01857 330 aa12.01□□□□□ -0.49
VSTM4-202ENST00000332853 FASLGP48023 281 aa12.01□□□□□ -0.49
VSTM4-202ENST00000332853 GP2P55259 537 aaKnown RBP12.01□□□□□ -0.49
VSTM4-202ENST00000332853 CLDN17P56750 224 aa12.01□□□□□ -0.49
VSTM4-202ENST00000332853 FXYD4P59646 89 aa12.01□□□□□ -0.49
VSTM4-202ENST00000332853 RUNX2Q13950 521 aa12.01□□□□□ -0.49
VSTM4-202ENST00000332853 NKG7Q16617 165 aa12.01□□□□□ -0.49
VSTM4-202ENST00000332853 FAM57BQ71RH2 274 aa12.01□□□□□ -0.49
VSTM4-202ENST00000332853 CA13Q8N1Q1 262 aa12.01□□□□□ -0.49
VSTM4-202ENST00000332853 ACBD4Q8NC06 268 aa12.01□□□□□ -0.49
VSTM4-202ENST00000332853 ZNF707Q96C28 371 aaPredicted RBP12.01□□□□□ -0.49
VSTM4-202ENST00000332853 UBQLN2Q9UHD9 624 aa12.01□□□□□ -0.49
VSTM4-202ENST00000332853 RHBDD3Q9Y3P4 386 aa12.01□□□□□ -0.49
VSTM4-202ENST00000332853 TSPAN9O75954 239 aa12.01□□□□□ -0.49
VSTM4-202ENST00000332853 KNG1P01042 644 aa12.01□□□□□ -0.49
VSTM4-202ENST00000332853 S100A9P06702 114 aaKnown RBP12.01□□□□□ -0.49
VSTM4-202ENST00000332853 GFERP55789 205 aa12.01□□□□□ -0.49
VSTM4-202ENST00000332853 ACTBP60709 375 aa12.01□□□□□ -0.49
VSTM4-202ENST00000332853 ACTG1P63261 375 aa12.01□□□□□ -0.49
VSTM4-202ENST00000332853 MANEAQ5SRI9 462 aa12.01□□□□□ -0.49
VSTM4-202ENST00000332853 ASB12Q8WXK4 309 aa12.01□□□□□ -0.49
VSTM4-202ENST00000332853 DUS3LQ96G46 650 aaKnown RBP12.01□□□□□ -0.49
VSTM4-202ENST00000332853 RADILQ96JH8 1075 aa12.01□□□□□ -0.49
VSTM4-202ENST00000332853 KCNIP3Q9Y2W7 256 aa12.01□□□□□ -0.49
VSTM4-202ENST00000332853 MEIOCA2RUB1 952 aa12.01□□□□□ -0.49
VSTM4-202ENST00000332853 F5H0A9 414 aaPredicted RBP12.01□□□□□ -0.49
VSTM4-202ENST00000332853 FZD7O75084 574 aa12.01□□□□□ -0.49
VSTM4-202ENST00000332853 SLC26A5P58743 744 aa12.01□□□□□ -0.49
VSTM4-202ENST00000332853 SMAP2Q8WU79 429 aaPredicted RBP12.01□□□□□ -0.49
VSTM4-202ENST00000332853 STACQ99469 402 aa12.01□□□□□ -0.49
VSTM4-202ENST00000332853 HHATLQ9HCP6 504 aa12.01□□□□□ -0.49
VSTM4-202ENST00000332853 NDRG4Q9ULP0 352 aaKnown RBP12.01□□□□□ -0.49
VSTM4-202ENST00000332853 C19orf53Q9UNZ5 99 aaPredicted RBP12.01□□□□□ -0.49
VSTM4-202ENST00000332853 UPK1AO00322 258 aa12.01□□□□□ -0.49
VSTM4-202ENST00000332853 KCNK2O95069 426 aa12.01□□□□□ -0.49
VSTM4-202ENST00000332853 APOC1P02654 83 aa12.01□□□□□ -0.49
VSTM4-202ENST00000332853 LTBQ06643 244 aa12.01□□□□□ -0.49
VSTM4-202ENST00000332853 SLC22A6Q4U2R8 563 aa12.01□□□□□ -0.49
VSTM4-202ENST00000332853 SYT14P1Q58G82 188 aa12.01□□□□□ -0.49
VSTM4-202ENST00000332853 DCAF12Q5T6F0 453 aa12.01□□□□□ -0.49
VSTM4-202ENST00000332853 SYT6Q5T7P8 510 aaPredicted RBP12.01□□□□□ -0.49
VSTM4-202ENST00000332853 RPL22L1Q6P5R6 122 aaKnown RBP12.01□□□□□ -0.49
VSTM4-202ENST00000332853 PRR18Q8N4B5 295 aa12.01□□□□□ -0.49
VSTM4-202ENST00000332853 BCORP1Q8N888 145 aa12.01□□□□□ -0.49
VSTM4-202ENST00000332853 OR1J4Q8NGS1 313 aa12.01□□□□□ -0.49
VSTM4-202ENST00000332853 ABHD4Q8TB40 342 aa12.01□□□□□ -0.49
VSTM4-202ENST00000332853 SLC41A2Q96JW4 573 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms