RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 DDAH2O95865 285 aa13.57□□□□□ -0.24
CLCNKA-201ENST00000331433 HLA-DQB1P01920 261 aa13.57□□□□□ -0.24
CLCNKA-201ENST00000331433 GRPRP30550 384 aa13.57□□□□□ -0.24
CLCNKA-201ENST00000331433 RORAP35398 523 aa13.57□□□□□ -0.24
CLCNKA-201ENST00000331433 DIO1P49895 249 aa13.57□□□□□ -0.24
CLCNKA-201ENST00000331433 ZP2Q05996 745 aa13.57□□□□□ -0.24
CLCNKA-201ENST00000331433 ATAD3CQ5T2N8 411 aa13.57□□□□□ -0.24
CLCNKA-201ENST00000331433 SYT9Q86SS6 491 aa13.57□□□□□ -0.24
CLCNKA-201ENST00000331433 RDH10Q8IZV5 341 aa13.57□□□□□ -0.24
CLCNKA-201ENST00000331433 SAMD12Q8N8I0 201 aa13.57□□□□□ -0.24
CLCNKA-201ENST00000331433 POMGNT2Q8NAT1 580 aa13.57□□□□□ -0.24
CLCNKA-201ENST00000331433 SNX33Q8WV41 574 aa13.57□□□□□ -0.24
CLCNKA-201ENST00000331433 ACOT12Q8WYK0 555 aa13.57□□□□□ -0.24
CLCNKA-201ENST00000331433 Q96M85 177 aa13.57□□□□□ -0.24
CLCNKA-201ENST00000331433 LRFN5Q96NI6 719 aa13.57□□□□□ -0.24
CLCNKA-201ENST00000331433 SLC46A1Q96NT5 459 aa13.57□□□□□ -0.24
CLCNKA-201ENST00000331433 DDOQ99489 341 aa13.57□□□□□ -0.24
CLCNKA-201ENST00000331433 RAB33BQ9H082 229 aa13.57□□□□□ -0.24
CLCNKA-201ENST00000331433 ACOXLQ9NUZ1 547 aa13.57□□□□□ -0.24
CLCNKA-201ENST00000331433 GNG8Q9UK08 70 aa13.57□□□□□ -0.24
CLCNKA-201ENST00000331433 ADAM30Q9UKF2 790 aa13.57□□□□□ -0.24
CLCNKA-201ENST00000331433 IGKV3D-11A0A0A0MRZ8 115 aa13.56□□□□□ -0.24
CLCNKA-201ENST00000331433 A0A0B4J293 547 aa13.56□□□□□ -0.24
CLCNKA-201ENST00000331433 ARPC3O15145 178 aa13.56□□□□□ -0.24
CLCNKA-201ENST00000331433 ZNF264O43296 627 aa13.56□□□□□ -0.24
CLCNKA-201ENST00000331433 ICOSLGO75144 302 aa13.56□□□□□ -0.24
CLCNKA-201ENST00000331433 IGKV3-11P04433 115 aa13.56□□□□□ -0.24
CLCNKA-201ENST00000331433 EIF4EP06730 217 aaKnown RBP13.56□□□□□ -0.24
CLCNKA-201ENST00000331433 FOLR1P15328 257 aa13.56□□□□□ -0.24
CLCNKA-201ENST00000331433 EGR4Q05215 589 aa13.56□□□□□ -0.24
CLCNKA-201ENST00000331433 GGTLC2Q14390 218 aa13.56□□□□□ -0.24
CLCNKA-201ENST00000331433 TRAM1Q15629 374 aa13.56□□□□□ -0.24
CLCNKA-201ENST00000331433 ZNF74Q16587 644 aa13.56□□□□□ -0.24
CLCNKA-201ENST00000331433 C1orf189Q5VU69 101 aa13.56□□□□□ -0.24
CLCNKA-201ENST00000331433 OR14A16Q8NHC5 309 aa13.56□□□□□ -0.24
CLCNKA-201ENST00000331433 ZNF721Q8TF20 911 aa13.56□□□□□ -0.24
CLCNKA-201ENST00000331433 DNAJA3Q96EY1 480 aa13.56□□□□□ -0.24
CLCNKA-201ENST00000331433 LCORQ96JN0 433 aaPredicted RBP13.56□□□□□ -0.24
CLCNKA-201ENST00000331433 TSSK2Q96PF2 358 aa13.56□□□□□ -0.24
CLCNKA-201ENST00000331433 TMEM43Q9BTV4 400 aa13.56□□□□□ -0.24
CLCNKA-201ENST00000331433 SLC19A3Q9BZV2 496 aa13.56□□□□□ -0.24
CLCNKA-201ENST00000331433 CHRDQ9H2X0 955 aa13.56□□□□□ -0.24
CLCNKA-201ENST00000331433 ZNF221Q9UK13 617 aa13.56□□□□□ -0.24
CLCNKA-201ENST00000331433 MMACHCQ9Y4U1 282 aa13.56□□□□□ -0.24
CLCNKA-201ENST00000331433 A0A1B0GVT2 93 aa13.56□□□□□ -0.24
CLCNKA-201ENST00000331433 PSMD9O00233 223 aa13.56□□□□□ -0.24
CLCNKA-201ENST00000331433 KRT8P05787 483 aa13.56□□□□□ -0.24
CLCNKA-201ENST00000331433 CSF2RBP32927 897 aa13.56□□□□□ -0.24
CLCNKA-201ENST00000331433 PSMB10P40306 273 aa13.56□□□□□ -0.24
CLCNKA-201ENST00000331433 CDKN2AP42771 156 aaKnown RBP13.56□□□□□ -0.24
CLCNKA-201ENST00000331433 GRK6P43250 576 aa13.56□□□□□ -0.24
CLCNKA-201ENST00000331433 MAP2K3P46734 347 aa13.56□□□□□ -0.24
CLCNKA-201ENST00000331433 GDI2P50395 445 aaKnown RBP13.56□□□□□ -0.24
CLCNKA-201ENST00000331433 EPHA4P54764 986 aa13.56□□□□□ -0.24
CLCNKA-201ENST00000331433 PRPS1P60891 318 aa13.56□□□□□ -0.24
CLCNKA-201ENST00000331433 LGALS3BPQ08380 585 aa13.56□□□□□ -0.24
CLCNKA-201ENST00000331433 CDK5R1Q15078 307 aa13.56□□□□□ -0.24
CLCNKA-201ENST00000331433 LEG1Q6P5S2 330 aa13.56□□□□□ -0.24
CLCNKA-201ENST00000331433 ADIPOR1Q96A54 375 aa13.56□□□□□ -0.24
CLCNKA-201ENST00000331433 SMIM19Q96E16 107 aa13.56□□□□□ -0.24
CLCNKA-201ENST00000331433 FAM210AQ96ND0 272 aa13.56□□□□□ -0.24
CLCNKA-201ENST00000331433 OR1F2PQ96R84 312 aa13.56□□□□□ -0.24
CLCNKA-201ENST00000331433 PDCD1LG2Q9BQ51 273 aa13.56□□□□□ -0.24
CLCNKA-201ENST00000331433 NUDT9Q9BW91 350 aa13.56□□□□□ -0.24
CLCNKA-201ENST00000331433 NMNAT2Q9BZQ4 307 aa13.56□□□□□ -0.24
CLCNKA-201ENST00000331433 RPRD1BQ9NQG5 326 aaKnown RBP13.56□□□□□ -0.24
CLCNKA-201ENST00000331433 NANSQ9NR45 359 aa13.56□□□□□ -0.24
CLCNKA-201ENST00000331433 F13BP05160 661 aa13.55□□□□□ -0.24
CLCNKA-201ENST00000331433 PNMTP11086 282 aa13.55□□□□□ -0.24
CLCNKA-201ENST00000331433 PSKH1P11801 424 aa13.55□□□□□ -0.24
CLCNKA-201ENST00000331433 ADH7P40394 386 aa13.55□□□□□ -0.24
CLCNKA-201ENST00000331433 GBX2P52951 348 aaPredicted RBP13.55□□□□□ -0.24
CLCNKA-201ENST00000331433 ACTA2P62736 377 aa13.55□□□□□ -0.24
CLCNKA-201ENST00000331433 ACTG2P63267 376 aa13.55□□□□□ -0.24
CLCNKA-201ENST00000331433 LTBQ06643 244 aa13.55□□□□□ -0.24
CLCNKA-201ENST00000331433 RIN1Q13671 783 aa13.55□□□□□ -0.24
CLCNKA-201ENST00000331433 CDONQ4KMG0 1287 aa13.55□□□□□ -0.24
CLCNKA-201ENST00000331433 SLC35F3Q8IY50 421 aa13.55□□□□□ -0.24
CLCNKA-201ENST00000331433 OR4M1Q8NGD0 313 aa13.55□□□□□ -0.24
CLCNKA-201ENST00000331433 ZNF563Q8TA94 476 aa13.55□□□□□ -0.24
CLCNKA-201ENST00000331433 THAP4Q8WY91 577 aa13.55□□□□□ -0.24
CLCNKA-201ENST00000331433 RNF121Q9H920 327 aa13.55□□□□□ -0.24
CLCNKA-201ENST00000331433 NEK6Q9HC98 313 aa13.55□□□□□ -0.24
CLCNKA-201ENST00000331433 MMP25Q9NPA2 562 aa13.55□□□□□ -0.24
CLCNKA-201ENST00000331433 NCDNQ9UBB6 729 aa13.55□□□□□ -0.24
CLCNKA-201ENST00000331433 MRPS17Q9Y2R5 130 aaKnown RBP13.55□□□□□ -0.24
CLCNKA-201ENST00000331433 PCDHGB7Q9Y5F8 929 aa13.55□□□□□ -0.24
CLCNKA-201ENST00000331433 TP53BP1Q12888 1972 aaPredicted RBP13.55□□□□□ -0.24
CLCNKA-201ENST00000331433 FRG2CA6NGY1 282 aa13.55□□□□□ -0.24
CLCNKA-201ENST00000331433 IDSB3KWA1 339 aa13.55□□□□□ -0.24
CLCNKA-201ENST00000331433 RPS5P46782 204 aaKnown RBP13.55□□□□□ -0.24
CLCNKA-201ENST00000331433 FOXL2P58012 376 aa13.55□□□□□ -0.24
CLCNKA-201ENST00000331433 SIRPAP78324 504 aa13.55□□□□□ -0.24
CLCNKA-201ENST00000331433 BIKQ13323 160 aa13.55□□□□□ -0.24
CLCNKA-201ENST00000331433 NSDHLQ15738 373 aa13.55□□□□□ -0.24
CLCNKA-201ENST00000331433 SMAD2Q15796 467 aaKnown RBP13.55□□□□□ -0.24
CLCNKA-201ENST00000331433 POMZP3Q6PJE2 187 aa13.55□□□□□ -0.24
CLCNKA-201ENST00000331433 CHRDL2Q6WN34 429 aa13.55□□□□□ -0.24
CLCNKA-201ENST00000331433 SLITRK4Q8IW52 837 aa13.55□□□□□ -0.24
CLCNKA-201ENST00000331433 C9orf40Q8IXQ3 194 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms