RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 MYF6P23409 242 aa9.22□□□□□ -0.93
VIPAS39-201ENST00000327028 POU1F1P28069 291 aa9.22□□□□□ -0.93
VIPAS39-201ENST00000327028 SHC1P29353 583 aa9.22□□□□□ -0.93
VIPAS39-201ENST00000327028 GGT2P36268 569 aa9.22□□□□□ -0.93
VIPAS39-201ENST00000327028 RPS6KA3P51812 740 aa9.22□□□□□ -0.93
VIPAS39-201ENST00000327028 FXYD6P3P58550 94 aa9.22□□□□□ -0.93
VIPAS39-201ENST00000327028 PMP22Q01453 160 aa9.22□□□□□ -0.93
VIPAS39-201ENST00000327028 MYBPHQ13203 477 aa9.22□□□□□ -0.93
VIPAS39-201ENST00000327028 INAQ16352 499 aa9.22□□□□□ -0.93
VIPAS39-201ENST00000327028 RNFT1Q5M7Z0 435 aa9.22□□□□□ -0.93
VIPAS39-201ENST00000327028 ZNF691Q5VV52 312 aa9.22□□□□□ -0.93
VIPAS39-201ENST00000327028 SLX4IPQ5VYV7 408 aa9.22□□□□□ -0.93
VIPAS39-201ENST00000327028 SLC6A19Q695T7 634 aa9.22□□□□□ -0.93
VIPAS39-201ENST00000327028 Q6ZPB1 254 aaPredicted RBP9.22□□□□□ -0.93
VIPAS39-201ENST00000327028 NANOGNBQ7Z5D8 188 aa9.22□□□□□ -0.93
VIPAS39-201ENST00000327028 OR52L1Q8NGH7 329 aa9.22□□□□□ -0.93
VIPAS39-201ENST00000327028 OR51A7Q8NH64 312 aa9.22□□□□□ -0.93
VIPAS39-201ENST00000327028 SAMD8Q96LT4 415 aa9.22□□□□□ -0.93
VIPAS39-201ENST00000327028 ZNF570Q96NI8 536 aa9.22□□□□□ -0.93
VIPAS39-201ENST00000327028 ADNPQ9H2P0 1102 aa9.22□□□□□ -0.93
VIPAS39-201ENST00000327028 ALKBH4Q9NXW9 302 aa9.22□□□□□ -0.93
VIPAS39-201ENST00000327028 HIF3AQ9Y2N7 669 aa9.22□□□□□ -0.93
VIPAS39-201ENST00000327028 GMPPBQ9Y5P6 360 aa9.22□□□□□ -0.93
VIPAS39-201ENST00000327028 CFAP47Q6ZTR5 3102 aa9.22□□□□□ -0.93
VIPAS39-201ENST00000327028 LIPT2A6NK58 231 aa9.22□□□□□ -0.93
VIPAS39-201ENST00000327028 TSPAN19P0C672 248 aa9.22□□□□□ -0.93
VIPAS39-201ENST00000327028 IMPDH2P12268 514 aa9.22□□□□□ -0.93
VIPAS39-201ENST00000327028 ZNF24P17028 368 aa9.22□□□□□ -0.93
VIPAS39-201ENST00000327028 UQCRC1P31930 480 aa9.22□□□□□ -0.93
VIPAS39-201ENST00000327028 SFTPDP35247 375 aa9.22□□□□□ -0.93
VIPAS39-201ENST00000327028 NUP107P57740 925 aa9.22□□□□□ -0.93
VIPAS39-201ENST00000327028 TMEM176BQ3YBM2 270 aaPredicted RBP9.22□□□□□ -0.93
VIPAS39-201ENST00000327028 ASB18Q6ZVZ8 466 aa9.22□□□□□ -0.93
VIPAS39-201ENST00000327028 MARVELD2Q8N4S9 558 aa9.22□□□□□ -0.93
VIPAS39-201ENST00000327028 C9orf43Q8TAL5 461 aaPredicted RBP9.22□□□□□ -0.93
VIPAS39-201ENST00000327028 KLHL15Q96M94 604 aa9.22□□□□□ -0.93
VIPAS39-201ENST00000327028 OR5B2Q96R09 309 aa9.22□□□□□ -0.93
VIPAS39-201ENST00000327028 TNFRSF13CQ96RJ3 184 aa9.22□□□□□ -0.93
VIPAS39-201ENST00000327028 TAPBPLQ9BX59 468 aa9.22□□□□□ -0.93
VIPAS39-201ENST00000327028 ASPNQ9BXN1 380 aa9.22□□□□□ -0.93
VIPAS39-201ENST00000327028 NDEL1Q9GZM8 345 aa9.22□□□□□ -0.93
VIPAS39-201ENST00000327028 SLC6A15Q9H2J7 730 aa9.22□□□□□ -0.93
VIPAS39-201ENST00000327028 B3GNT3Q9Y2A9 372 aa9.22□□□□□ -0.93
VIPAS39-201ENST00000327028 CORINQ9Y5Q5 1042 aa9.22□□□□□ -0.93
VIPAS39-201ENST00000327028 TFECO14948 347 aaPredicted RBP9.21□□□□□ -0.93
VIPAS39-201ENST00000327028 NDUFB2O95178 105 aa9.21□□□□□ -0.93
VIPAS39-201ENST00000327028 CLIC3O95833 236 aa9.21□□□□□ -0.93
VIPAS39-201ENST00000327028 HIST1H2ABP04908 130 aa9.21□□□□□ -0.93
VIPAS39-201ENST00000327028 BMP7P18075 431 aa9.21□□□□□ -0.93
VIPAS39-201ENST00000327028 POU3F2P20265 443 aaPredicted RBP9.21□□□□□ -0.93
VIPAS39-201ENST00000327028 GRPRP30550 384 aa9.21□□□□□ -0.93
VIPAS39-201ENST00000327028 SLC6A6P31641 620 aa9.21□□□□□ -0.93
VIPAS39-201ENST00000327028 GIPRP48546 466 aa9.21□□□□□ -0.93
VIPAS39-201ENST00000327028 SMSP52788 366 aa9.21□□□□□ -0.93
VIPAS39-201ENST00000327028 PRPS1P60891 318 aa9.21□□□□□ -0.93
VIPAS39-201ENST00000327028 CDK5Q00535 292 aa9.21□□□□□ -0.93
VIPAS39-201ENST00000327028 MED21Q13503 144 aa9.21□□□□□ -0.93
VIPAS39-201ENST00000327028 GINS1Q14691 196 aa9.21□□□□□ -0.93
VIPAS39-201ENST00000327028 SLC10A1Q14973 349 aa9.21□□□□□ -0.93
VIPAS39-201ENST00000327028 OR7A5Q15622 319 aa9.21□□□□□ -0.93
VIPAS39-201ENST00000327028 SGCBQ16585 318 aa9.21□□□□□ -0.93
VIPAS39-201ENST00000327028 LINC00303Q3SY05 128 aa9.21□□□□□ -0.93
VIPAS39-201ENST00000327028 C12orf73Q69YU5 71 aa9.21□□□□□ -0.93
VIPAS39-201ENST00000327028 RPUSD3Q6P087 351 aaKnown RBP9.21□□□□□ -0.93
VIPAS39-201ENST00000327028 HIST3H2AQ7L7L0 130 aa9.21□□□□□ -0.93
VIPAS39-201ENST00000327028 C8orf59Q8N0T1 100 aaPredicted RBP9.21□□□□□ -0.93
VIPAS39-201ENST00000327028 SCAIQ8N9R8 606 aa9.21□□□□□ -0.93
VIPAS39-201ENST00000327028 SETD9Q8NE22 299 aa9.21□□□□□ -0.93
VIPAS39-201ENST00000327028 OR5J2Q8NH18 312 aa9.21□□□□□ -0.93
VIPAS39-201ENST00000327028 HIST1H2ACQ93077 130 aa9.21□□□□□ -0.93
VIPAS39-201ENST00000327028 MIB2Q96AX9 1013 aa9.21□□□□□ -0.93
VIPAS39-201ENST00000327028 SLC25A36Q96CQ1 311 aa9.21□□□□□ -0.93
VIPAS39-201ENST00000327028 DNAJA3Q96EY1 480 aa9.21□□□□□ -0.93
VIPAS39-201ENST00000327028 CNBD2Q96M20 576 aa9.21□□□□□ -0.93
VIPAS39-201ENST00000327028 APOL4Q9BPW4 351 aa9.21□□□□□ -0.93
VIPAS39-201ENST00000327028 TSSK6Q9BXA6 273 aa9.21□□□□□ -0.93
VIPAS39-201ENST00000327028 PRORYQ9H606 182 aa9.21□□□□□ -0.93
VIPAS39-201ENST00000327028 MRPL39Q9NYK5 338 aaKnown RBP9.21□□□□□ -0.93
VIPAS39-201ENST00000327028 LHX6Q9UPM6 363 aa9.21□□□□□ -0.93
VIPAS39-201ENST00000327028 MGAQ8IWI9 3026 aa9.21□□□□□ -0.93
VIPAS39-201ENST00000327028 LOC400499M0QZD8 3231 aa9.21□□□□□ -0.94
VIPAS39-201ENST00000327028 M0R082 166 aa9.21□□□□□ -0.94
VIPAS39-201ENST00000327028 PMS2P2O95744 297 aa9.21□□□□□ -0.94
VIPAS39-201ENST00000327028 GTF2E2P29084 291 aaKnown RBP9.21□□□□□ -0.94
VIPAS39-201ENST00000327028 TPD52P55327 224 aaPredicted RBP9.21□□□□□ -0.94
VIPAS39-201ENST00000327028 C19orf57Q0VDD7 668 aa9.21□□□□□ -0.94
VIPAS39-201ENST00000327028 PGGHGQ32M88 737 aa9.21□□□□□ -0.94
VIPAS39-201ENST00000327028 CLEC12AQ5QGZ9 265 aa9.21□□□□□ -0.94
VIPAS39-201ENST00000327028 TMEM236Q5W0B7 351 aa9.21□□□□□ -0.94
VIPAS39-201ENST00000327028 SLC27A4Q6P1M0 643 aa9.21□□□□□ -0.94
VIPAS39-201ENST00000327028 THSD4Q6ZMP0 1018 aa9.21□□□□□ -0.94
VIPAS39-201ENST00000327028 TRILQ7L0X0 811 aa9.21□□□□□ -0.94
VIPAS39-201ENST00000327028 GGNQ86UU5 652 aa9.21□□□□□ -0.94
VIPAS39-201ENST00000327028 IQCF1Q8N6M8 205 aa9.21□□□□□ -0.94
VIPAS39-201ENST00000327028 ADPRHL1Q8NDY3 354 aa9.21□□□□□ -0.94
VIPAS39-201ENST00000327028 OR2T33Q8NG76 320 aa9.21□□□□□ -0.94
VIPAS39-201ENST00000327028 ZNF417Q8TAU3 575 aa9.21□□□□□ -0.94
VIPAS39-201ENST00000327028 SMPDL3BQ92485 455 aa9.21□□□□□ -0.94
VIPAS39-201ENST00000327028 RELTQ969Z4 430 aa9.21□□□□□ -0.94
VIPAS39-201ENST00000327028 MUS81Q96NY9 551 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms