RNA–Protein interactions for RNA: ENST00000326828.5

CHRNA3-201, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA3, Length 3,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-201ENST00000326828 GABRA1P14867 456 aa13.15□□□□□ -0.3
CHRNA3-201ENST00000326828 STARP49675 285 aa13.15□□□□□ -0.3
CHRNA3-201ENST00000326828 RPS11P62280 158 aaKnown RBP eCLIP13.15□□□□□ -0.3
CHRNA3-201ENST00000326828 MC2RQ01718 297 aa13.15□□□□□ -0.3
CHRNA3-201ENST00000326828 MLF2Q15773 248 aaPredicted RBP13.15□□□□□ -0.3
CHRNA3-201ENST00000326828 TFAP2EQ6VUC0 442 aa13.15□□□□□ -0.3
CHRNA3-201ENST00000326828 RNF44Q7L0R7 432 aa13.15□□□□□ -0.3
CHRNA3-201ENST00000326828 OR6V1Q8N148 313 aa13.15□□□□□ -0.3
CHRNA3-201ENST00000326828 CRIPAKQ8N1N5 446 aa13.15□□□□□ -0.3
CHRNA3-201ENST00000326828 COX18Q8N8Q8 333 aa13.15□□□□□ -0.3
CHRNA3-201ENST00000326828 ZNF511Q8NB15 262 aa13.15□□□□□ -0.3
CHRNA3-201ENST00000326828 ZPLD1Q8TCW7 415 aa13.15□□□□□ -0.3
CHRNA3-201ENST00000326828 SLC25A28Q96A46 364 aa13.15□□□□□ -0.3
CHRNA3-201ENST00000326828 ULBP3Q9BZM4 244 aa13.15□□□□□ -0.3
CHRNA3-201ENST00000326828 EPHX3Q9H6B9 360 aa13.15□□□□□ -0.3
CHRNA3-201ENST00000326828 TMEM185BQ9H7F4 350 aa13.15□□□□□ -0.3
CHRNA3-201ENST00000326828 SYNDIG1Q9H7V2 258 aa13.15□□□□□ -0.3
CHRNA3-201ENST00000326828 TMEM74BQ9NUR3 256 aa13.15□□□□□ -0.3
CHRNA3-201ENST00000326828 C2orf42Q9NWW7 574 aa13.15□□□□□ -0.3
CHRNA3-201ENST00000326828 MDC1Q14676 2089 aaKnown RBP13.15□□□□□ -0.3
CHRNA3-201ENST00000326828 GABARAPH6UMI1 98 aa13.15□□□□□ -0.31
CHRNA3-201ENST00000326828 PRAF2O60831 178 aa13.15□□□□□ -0.31
CHRNA3-201ENST00000326828 PAK4O96013 591 aaPredicted RBP13.15□□□□□ -0.31
CHRNA3-201ENST00000326828 RPN2P04844 631 aa13.15□□□□□ -0.31
CHRNA3-201ENST00000326828 DEFB103AP81534 67 aa13.15□□□□□ -0.31
CHRNA3-201ENST00000326828 ZNF169Q14929 603 aaPredicted RBP13.15□□□□□ -0.31
CHRNA3-201ENST00000326828 MLC1Q15049 377 aa13.15□□□□□ -0.31
CHRNA3-201ENST00000326828 TRAM1Q15629 374 aa13.15□□□□□ -0.31
CHRNA3-201ENST00000326828 TMEM64Q6YI46 380 aa13.15□□□□□ -0.31
CHRNA3-201ENST00000326828 MAMSTRQ6ZN01 415 aa13.15□□□□□ -0.31
CHRNA3-201ENST00000326828 ZAR1Q86SH2 424 aa13.15□□□□□ -0.31
CHRNA3-201ENST00000326828 ASPGQ86U10 573 aa13.15□□□□□ -0.31
CHRNA3-201ENST00000326828 SLC35F2Q8IXU6 374 aa13.15□□□□□ -0.31
CHRNA3-201ENST00000326828 NRSN1Q8IZ57 195 aa13.15□□□□□ -0.31
CHRNA3-201ENST00000326828 MUC20Q8N307 709 aaPredicted RBP13.15□□□□□ -0.31
CHRNA3-201ENST00000326828 PAWRQ96IZ0 340 aaKnown RBP13.15□□□□□ -0.31
CHRNA3-201ENST00000326828 SDF2Q99470 211 aa13.15□□□□□ -0.31
CHRNA3-201ENST00000326828 C7orf50Q9BRJ6 194 aaKnown RBP13.15□□□□□ -0.31
CHRNA3-201ENST00000326828 LDAHQ9H6V9 325 aa13.15□□□□□ -0.31
CHRNA3-201ENST00000326828 TCF7L1Q9HCS4 588 aa13.15□□□□□ -0.31
CHRNA3-201ENST00000326828 OR5V1Q9UGF6 321 aa13.15□□□□□ -0.31
CHRNA3-201ENST00000326828 OPN4Q9UHM6 478 aa13.15□□□□□ -0.31
CHRNA3-201ENST00000326828 KCNE5Q9UJ90 142 aa13.15□□□□□ -0.31
CHRNA3-201ENST00000326828 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.14□□□□□ -0.31
CHRNA3-201ENST00000326828 A8MXK9 166 aa13.14□□□□□ -0.31
CHRNA3-201ENST00000326828 D6RAR5 112 aa13.14□□□□□ -0.31
CHRNA3-201ENST00000326828 F5H5P2 479 aa13.14□□□□□ -0.31
CHRNA3-201ENST00000326828 GALR3O60755 368 aaPredicted RBP13.14□□□□□ -0.31
CHRNA3-201ENST00000326828 TPPPO94811 219 aa13.14□□□□□ -0.31
CHRNA3-201ENST00000326828 CXCL14O95715 111 aa13.14□□□□□ -0.31
CHRNA3-201ENST00000326828 ZNF888P0CJ79 500 aaPredicted RBP13.14□□□□□ -0.31
CHRNA3-201ENST00000326828 OR8G3PP0DMU2 310 aa13.14□□□□□ -0.31
CHRNA3-201ENST00000326828 PPP3CBP16298 524 aa13.14□□□□□ -0.31
CHRNA3-201ENST00000326828 RAG2P55895 527 aa13.14□□□□□ -0.31
CHRNA3-201ENST00000326828 OR4E2Q8NGC2 313 aa13.14□□□□□ -0.31
CHRNA3-201ENST00000326828 OR51S1Q8NGJ8 323 aa13.14□□□□□ -0.31
CHRNA3-201ENST00000326828 MRPS24Q96EL2 167 aaKnown RBP13.14□□□□□ -0.31
CHRNA3-201ENST00000326828 GIMAP5Q96F15 307 aa13.14□□□□□ -0.31
CHRNA3-201ENST00000326828 CNN2Q99439 309 aaKnown RBP13.14□□□□□ -0.31
CHRNA3-201ENST00000326828 TAS2R5Q9NYW4 299 aa13.14□□□□□ -0.31
CHRNA3-201ENST00000326828 C17orf113A0A1B0GUU1 675 aa13.14□□□□□ -0.31
CHRNA3-201ENST00000326828 OR2W5A6NFC9 320 aa13.14□□□□□ -0.31
CHRNA3-201ENST00000326828 GRXCR1A8MXD5 290 aa13.14□□□□□ -0.31
CHRNA3-201ENST00000326828 ZNF879B4DU55 563 aa13.14□□□□□ -0.31
CHRNA3-201ENST00000326828 AIPO00170 330 aa13.14□□□□□ -0.31
CHRNA3-201ENST00000326828 PRICKLE3O43900 615 aaPredicted RBP13.14□□□□□ -0.31
CHRNA3-201ENST00000326828 GMFGO60234 142 aa13.14□□□□□ -0.31
CHRNA3-201ENST00000326828 HIST1H2ABP04908 130 aa13.14□□□□□ -0.31
CHRNA3-201ENST00000326828 AMZ1Q400G9 498 aa13.14□□□□□ -0.31
CHRNA3-201ENST00000326828 ZNF626Q68DY1 528 aa13.14□□□□□ -0.31
CHRNA3-201ENST00000326828 ZNF660Q6AZW8 331 aaPredicted RBP13.14□□□□□ -0.31
CHRNA3-201ENST00000326828 HIST3H2AQ7L7L0 130 aa13.14□□□□□ -0.31
CHRNA3-201ENST00000326828 LINC00518Q8N0U6 118 aa13.14□□□□□ -0.31
CHRNA3-201ENST00000326828 HIST1H2ACQ93077 130 aa13.14□□□□□ -0.31
CHRNA3-201ENST00000326828 SEC22AQ96IW7 307 aa13.14□□□□□ -0.31
CHRNA3-201ENST00000326828 EXO5Q9H790 373 aa13.14□□□□□ -0.31
CHRNA3-201ENST00000326828 ZMAT3Q9HA38 289 aaKnown RBP13.14□□□□□ -0.31
CHRNA3-201ENST00000326828 AKAP7Q9P0M2 348 aaPredicted RBP13.14□□□□□ -0.31
CHRNA3-201ENST00000326828 V9GY05 133 aa13.14□□□□□ -0.31
CHRNA3-201ENST00000326828 FAM25EA8MYX2 175 aa13.13□□□□□ -0.31
CHRNA3-201ENST00000326828 ZFPL1O95159 310 aa13.13□□□□□ -0.31
CHRNA3-201ENST00000326828 ECDO95905 644 aaPredicted RBP13.13□□□□□ -0.31
CHRNA3-201ENST00000326828 PRNPP04156 253 aa13.13□□□□□ -0.31
CHRNA3-201ENST00000326828 GTF2F2P13984 249 aa13.13□□□□□ -0.31
CHRNA3-201ENST00000326828 ART1P52961 327 aa13.13□□□□□ -0.31
CHRNA3-201ENST00000326828 NANOS3P60323 173 aaKnown RBP13.13□□□□□ -0.31
CHRNA3-201ENST00000326828 LIN54Q6MZP7 749 aa13.13□□□□□ -0.31
CHRNA3-201ENST00000326828 RAB42Q8N4Z0 105 aa13.13□□□□□ -0.31
CHRNA3-201ENST00000326828 SLAIN1Q8ND83 568 aa13.13□□□□□ -0.31
CHRNA3-201ENST00000326828 OR2L5Q8NG80 312 aa13.13□□□□□ -0.31
CHRNA3-201ENST00000326828 SFXN5Q8TD22 340 aa13.13□□□□□ -0.31
CHRNA3-201ENST00000326828 RASD2Q96D21 266 aa13.13□□□□□ -0.31
CHRNA3-201ENST00000326828 ANKRD10Q9NXR5 420 aa13.13□□□□□ -0.31
CHRNA3-201ENST00000326828 MLXQ9UH92 298 aa13.13□□□□□ -0.31
CHRNA3-201ENST00000326828 CCSO14618 274 aa13.13□□□□□ -0.31
CHRNA3-201ENST00000326828 PRKNO60260 465 aaPredicted RBP13.13□□□□□ -0.31
CHRNA3-201ENST00000326828 DLX5P56178 289 aa13.13□□□□□ -0.31
CHRNA3-201ENST00000326828 TAS2R20P59543 309 aa13.13□□□□□ -0.31
CHRNA3-201ENST00000326828 RD3Q7Z3Z2 195 aa13.13□□□□□ -0.31
CHRNA3-201ENST00000326828 C10orf53Q8N6V4 93 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms