RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 GMDSO60547 372 aa11.85□□□□□ -0.51
HMGCS1-201ENST00000325110 ADAM11O75078 769 aa11.85□□□□□ -0.51
HMGCS1-201ENST00000325110 ANKRD34CP0C6C1 535 aa11.85□□□□□ -0.51
HMGCS1-201ENST00000325110 COL9A1P20849 921 aa11.85□□□□□ -0.51
HMGCS1-201ENST00000325110 BLVRAP53004 296 aa11.85□□□□□ -0.51
HMGCS1-201ENST00000325110 ACTA2P62736 377 aa11.85□□□□□ -0.51
HMGCS1-201ENST00000325110 ACTG2P63267 376 aa11.85□□□□□ -0.51
HMGCS1-201ENST00000325110 BIKQ13323 160 aa11.85□□□□□ -0.51
HMGCS1-201ENST00000325110 CAMK2BQ13554 666 aa11.85□□□□□ -0.51
HMGCS1-201ENST00000325110 NFATC4Q14934 902 aa11.85□□□□□ -0.51
HMGCS1-201ENST00000325110 CDK5R1Q15078 307 aa11.85□□□□□ -0.51
HMGCS1-201ENST00000325110 FAM209AQ5JX71 171 aa11.85□□□□□ -0.51
HMGCS1-201ENST00000325110 Q6ZSR6 202 aa11.85□□□□□ -0.51
HMGCS1-201ENST00000325110 DEFB119Q8N690 84 aa11.85□□□□□ -0.51
HMGCS1-201ENST00000325110 SYNPRQ8TBG9 265 aa11.85□□□□□ -0.51
HMGCS1-201ENST00000325110 ZPLD1Q8TCW7 415 aa11.85□□□□□ -0.51
HMGCS1-201ENST00000325110 HSD17B8Q92506 261 aa11.85□□□□□ -0.51
HMGCS1-201ENST00000325110 RSC1A1Q92681 617 aa11.85□□□□□ -0.51
HMGCS1-201ENST00000325110 MS4A3Q96HJ5 214 aa11.85□□□□□ -0.51
HMGCS1-201ENST00000325110 DGAT2Q96PD7 388 aa11.85□□□□□ -0.51
HMGCS1-201ENST00000325110 ELF4Q99607 663 aaPredicted RBP11.85□□□□□ -0.51
HMGCS1-201ENST00000325110 ULBP3Q9BZM4 244 aa11.85□□□□□ -0.51
HMGCS1-201ENST00000325110 MYEF2Q9P2K5 600 aaKnown RBP11.85□□□□□ -0.51
HMGCS1-201ENST00000325110 CPNE7Q9UBL6 633 aa11.85□□□□□ -0.51
HMGCS1-201ENST00000325110 ZNF223Q9UK11 482 aaPredicted RBP11.85□□□□□ -0.51
HMGCS1-201ENST00000325110 CHD9Q3L8U1 2897 aa11.85□□□□□ -0.51
HMGCS1-201ENST00000325110 ZNF593O00488 134 aaPredicted RBP11.85□□□□□ -0.51
HMGCS1-201ENST00000325110 HCRTR1O43613 425 aa11.85□□□□□ -0.51
HMGCS1-201ENST00000325110 DOK2O60496 412 aa11.85□□□□□ -0.51
HMGCS1-201ENST00000325110 HLA-DQB1P01920 261 aa11.85□□□□□ -0.51
HMGCS1-201ENST00000325110 HPXP02790 462 aa11.85□□□□□ -0.51
HMGCS1-201ENST00000325110 NGFRP08138 427 aa11.85□□□□□ -0.51
HMGCS1-201ENST00000325110 UBE2MP61081 183 aaKnown RBP11.85□□□□□ -0.51
HMGCS1-201ENST00000325110 BTG1P62324 171 aa11.85□□□□□ -0.51
HMGCS1-201ENST00000325110 GAS6Q14393 721 aa11.85□□□□□ -0.51
HMGCS1-201ENST00000325110 KANSL1Q7Z3B3 1105 aa11.85□□□□□ -0.51
HMGCS1-201ENST00000325110 SLITRK4Q8IW52 837 aa11.85□□□□□ -0.51
HMGCS1-201ENST00000325110 MMABQ96EY8 250 aaPredicted RBP11.85□□□□□ -0.51
HMGCS1-201ENST00000325110 SOSTQ9BQB4 213 aa11.85□□□□□ -0.51
HMGCS1-201ENST00000325110 FKRPQ9H9S5 495 aa11.85□□□□□ -0.51
HMGCS1-201ENST00000325110 LIN7BQ9HAP6 207 aa11.85□□□□□ -0.51
HMGCS1-201ENST00000325110 PNO1Q9NRX1 252 aaKnown RBP11.85□□□□□ -0.51
HMGCS1-201ENST00000325110 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.85□□□□□ -0.51
HMGCS1-201ENST00000325110 EVA1BQ9NVM1 165 aa11.85□□□□□ -0.51
HMGCS1-201ENST00000325110 NCDNQ9UBB6 729 aa11.85□□□□□ -0.51
HMGCS1-201ENST00000325110 COPS3Q9UNS2 423 aa11.85□□□□□ -0.51
HMGCS1-201ENST00000325110 USP34Q70CQ2 3546 aa11.84□□□□□ -0.51
HMGCS1-201ENST00000325110 BRINP1O60477 761 aa11.84□□□□□ -0.51
HMGCS1-201ENST00000325110 MAOAP21397 527 aa11.84□□□□□ -0.51
HMGCS1-201ENST00000325110 PTBP1P26599 531 aaKnown RBP eCLIP11.84□□□□□ -0.511e-9■■□□□ 12.9
HMGCS1-201ENST00000325110 LSSP48449 732 aa11.84□□□□□ -0.51
HMGCS1-201ENST00000325110 CTXN1P60606 82 aa11.84□□□□□ -0.51
HMGCS1-201ENST00000325110 BDH1Q02338 343 aa11.84□□□□□ -0.51
HMGCS1-201ENST00000325110 KCNAB1Q14722 419 aa11.84□□□□□ -0.51
HMGCS1-201ENST00000325110 FCRL6Q6DN72 434 aa11.84□□□□□ -0.51
HMGCS1-201ENST00000325110 SMIM19Q96E16 107 aa11.84□□□□□ -0.51
HMGCS1-201ENST00000325110 ELMOD3Q96FG2 381 aa11.84□□□□□ -0.51
HMGCS1-201ENST00000325110 S100A16Q96FQ6 103 aaKnown RBP11.84□□□□□ -0.51
HMGCS1-201ENST00000325110 OR2M2Q96R28 347 aa11.84□□□□□ -0.51
HMGCS1-201ENST00000325110 C20orf85Q9H1P6 137 aa11.84□□□□□ -0.51
HMGCS1-201ENST00000325110 MCCC2Q9HCC0 563 aa11.84□□□□□ -0.51
HMGCS1-201ENST00000325110 INPP5EQ9NRR6 644 aa11.84□□□□□ -0.51
HMGCS1-201ENST00000325110 SATB2Q9UPW6 733 aa11.84□□□□□ -0.51
HMGCS1-201ENST00000325110 MRPS33Q9Y291 106 aaKnown RBP11.84□□□□□ -0.51
HMGCS1-201ENST00000325110 A0A087WV48 116 aa11.84□□□□□ -0.51
HMGCS1-201ENST00000325110 FXYD6-FXYD2A0A087WZ82 144 aa11.84□□□□□ -0.51
HMGCS1-201ENST00000325110 CDC14CA4D256 554 aa11.84□□□□□ -0.51
HMGCS1-201ENST00000325110 LINC01565O15544 149 aa11.84□□□□□ -0.51
HMGCS1-201ENST00000325110 ITGA10O75578 1167 aa11.84□□□□□ -0.51
HMGCS1-201ENST00000325110 SLC22A5O76082 557 aa11.84□□□□□ -0.51
HMGCS1-201ENST00000325110 CSN2P05814 226 aa11.84□□□□□ -0.51
HMGCS1-201ENST00000325110 CELA2BP08218 269 aaPredicted RBP11.84□□□□□ -0.51
HMGCS1-201ENST00000325110 BTG2P78543 158 aa11.84□□□□□ -0.51
HMGCS1-201ENST00000325110 FZD5Q13467 585 aa11.84□□□□□ -0.51
HMGCS1-201ENST00000325110 TMPRSS11FQ6ZWK6 438 aa11.84□□□□□ -0.51
HMGCS1-201ENST00000325110 TRILQ7L0X0 811 aa11.84□□□□□ -0.51
HMGCS1-201ENST00000325110 COMMD7Q86VX2 200 aa11.84□□□□□ -0.51
HMGCS1-201ENST00000325110 OR4C3Q8NH37 302 aa11.84□□□□□ -0.51
HMGCS1-201ENST00000325110 FCAMRQ8WWV6 532 aa11.84□□□□□ -0.51
HMGCS1-201ENST00000325110 OR8D2Q9GZM6 311 aa11.84□□□□□ -0.51
HMGCS1-201ENST00000325110 CRISPLD2Q9H0B8 497 aa11.84□□□□□ -0.51
HMGCS1-201ENST00000325110 FXYD6Q9H0Q3 95 aa11.84□□□□□ -0.51
HMGCS1-201ENST00000325110 RXFP3Q9NSD7 469 aa11.84□□□□□ -0.51
HMGCS1-201ENST00000325110 DTX4Q9Y2E6 619 aa11.84□□□□□ -0.51
HMGCS1-201ENST00000325110 GPR171O14626 319 aa11.83□□□□□ -0.51
HMGCS1-201ENST00000325110 KRT33AO76009 404 aa11.83□□□□□ -0.51
HMGCS1-201ENST00000325110 IFNA7P01567 189 aa11.83□□□□□ -0.51
HMGCS1-201ENST00000325110 SRMP19623 302 aa11.83□□□□□ -0.51
HMGCS1-201ENST00000325110 ANXA7P20073 488 aaKnown RBP11.83□□□□□ -0.51
HMGCS1-201ENST00000325110 THBS2P35442 1172 aa11.83□□□□□ -0.51
HMGCS1-201ENST00000325110 PSMA6P60900 246 aaKnown RBP11.83□□□□□ -0.51
HMGCS1-201ENST00000325110 ACSM1Q08AH1 577 aa11.83□□□□□ -0.51
HMGCS1-201ENST00000325110 POU4F2Q12837 409 aa11.83□□□□□ -0.51
HMGCS1-201ENST00000325110 TNK1Q13470 666 aa11.83□□□□□ -0.51
HMGCS1-201ENST00000325110 C1orf53Q5VUE5 145 aa11.83□□□□□ -0.51
HMGCS1-201ENST00000325110 YOD1Q5VVQ6 348 aaPredicted RBP11.83□□□□□ -0.51
HMGCS1-201ENST00000325110 ZNF613Q6PF04 617 aa11.83□□□□□ -0.51
HMGCS1-201ENST00000325110 ULK3Q6PHR2 472 aa11.83□□□□□ -0.51
HMGCS1-201ENST00000325110 RTL10Q7L3V2 364 aa11.83□□□□□ -0.51
HMGCS1-201ENST00000325110 MOSPD2Q8NHP6 518 aa11.83□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms