RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 GRINAQ7Z429 371 aa16.69■□□□□ 0.26
USP39-201ENST00000323701 P2RY8Q86VZ1 359 aa16.69■□□□□ 0.26
USP39-201ENST00000323701 MISPQ8IVT2 679 aa16.69■□□□□ 0.26
USP39-201ENST00000323701 NANOGP1Q8N7R0 232 aa16.69■□□□□ 0.26
USP39-201ENST00000323701 LRRC75AQ8NAA5 344 aa16.69■□□□□ 0.26
USP39-201ENST00000323701 OR52E2Q8NGJ4 325 aa16.69■□□□□ 0.26
USP39-201ENST00000323701 SMAP2Q8WU79 429 aaPredicted RBP16.69■□□□□ 0.26
USP39-201ENST00000323701 RASD2Q96D21 266 aa16.69■□□□□ 0.26
USP39-201ENST00000323701 KATNB1Q9BVA0 655 aa16.69■□□□□ 0.26
USP39-201ENST00000323701 FN3KQ9H479 309 aa16.69■□□□□ 0.26
USP39-201ENST00000323701 NRIP3Q9NQ35 241 aa16.69■□□□□ 0.26
USP39-201ENST00000323701 WIF1Q9Y5W5 379 aa16.69■□□□□ 0.26
USP39-201ENST00000323701 CEP250Q9BV73 2442 aa16.69■□□□□ 0.26
USP39-201ENST00000323701 DOCK10Q96BY6 2186 aa16.68■□□□□ 0.26
USP39-201ENST00000323701 CCDC182A6NF36 153 aa16.68■□□□□ 0.26
USP39-201ENST00000323701 EFNA2O43921 213 aa16.68■□□□□ 0.26
USP39-201ENST00000323701 FOXD2O60548 495 aaPredicted RBP16.68■□□□□ 0.26
USP39-201ENST00000323701 LRP3O75074 770 aa16.68■□□□□ 0.26
USP39-201ENST00000323701 RAB36O95755 333 aa16.68■□□□□ 0.26
USP39-201ENST00000323701 IGF2P01344 180 aa16.68■□□□□ 0.26
USP39-201ENST00000323701 F13BP05160 661 aa16.68■□□□□ 0.26
USP39-201ENST00000323701 LIMS3P0CW19 117 aa16.68■□□□□ 0.26
USP39-201ENST00000323701 LIMS4P0CW20 117 aa16.68■□□□□ 0.26
USP39-201ENST00000323701 UQCRC1P31930 480 aa16.68■□□□□ 0.26
USP39-201ENST00000323701 DLSTP36957 453 aa16.68■□□□□ 0.26
USP39-201ENST00000323701 DCTN2Q13561 401 aaKnown RBP16.68■□□□□ 0.26
USP39-201ENST00000323701 DNASE1L3Q13609 305 aa16.68■□□□□ 0.26
USP39-201ENST00000323701 KLHL12Q53G59 568 aa16.68■□□□□ 0.26
USP39-201ENST00000323701 SOWAHCQ53LP3 525 aaPredicted RBP16.68■□□□□ 0.26
USP39-201ENST00000323701 OR2G6Q5TZ20 316 aa16.68■□□□□ 0.26
USP39-201ENST00000323701 TMEM164Q5U3C3 297 aa16.68■□□□□ 0.26
USP39-201ENST00000323701 RPS19BP1Q86WX3 136 aaKnown RBP16.68■□□□□ 0.26
USP39-201ENST00000323701 WDSUB1Q8N9V3 476 aa16.68■□□□□ 0.26
USP39-201ENST00000323701 OR9Q1Q8NGQ5 310 aa16.68■□□□□ 0.26
USP39-201ENST00000323701 ZNRF4Q8WWF5 429 aa16.68■□□□□ 0.26
USP39-201ENST00000323701 OPALINQ96PE5 141 aa16.68■□□□□ 0.26
USP39-201ENST00000323701 MGLLQ99685 303 aa16.68■□□□□ 0.26
USP39-201ENST00000323701 ZNF649Q9BS31 505 aa16.68■□□□□ 0.26
USP39-201ENST00000323701 GPN2Q9H9Y4 310 aaPredicted RBP16.68■□□□□ 0.26
USP39-201ENST00000323701 FGF20Q9NP95 211 aaPredicted RBP16.68■□□□□ 0.26
USP39-201ENST00000323701 P4HTMQ9NXG6 502 aa16.68■□□□□ 0.26
USP39-201ENST00000323701 PPP4R1LQ9P1A2 415 aa16.68■□□□□ 0.26
USP39-201ENST00000323701 HIF3AQ9Y2N7 669 aa16.68■□□□□ 0.26
USP39-201ENST00000323701 LAMA5O15230 3695 aa16.68■□□□□ 0.26
USP39-201ENST00000323701 CCL3P10147 92 aa16.68■□□□□ 0.26
USP39-201ENST00000323701 IMPDH2P12268 514 aa16.68■□□□□ 0.26
USP39-201ENST00000323701 SLC2A5P22732 501 aa16.68■□□□□ 0.26
USP39-201ENST00000323701 VBP1P61758 197 aa16.68■□□□□ 0.26
USP39-201ENST00000323701 NCS1P62166 190 aa16.68■□□□□ 0.26
USP39-201ENST00000323701 RPL18Q07020 188 aaKnown RBP16.68■□□□□ 0.26
USP39-201ENST00000323701 LHFPL3Q86UP9 236 aa16.68■□□□□ 0.26
USP39-201ENST00000323701 ZBTB46Q86UZ6 589 aa16.68■□□□□ 0.26
USP39-201ENST00000323701 C9orf43Q8TAL5 461 aaPredicted RBP16.68■□□□□ 0.26
USP39-201ENST00000323701 RFKQ969G6 155 aa16.68■□□□□ 0.26
USP39-201ENST00000323701 CRELD1Q96HD1 420 aa16.68■□□□□ 0.26
USP39-201ENST00000323701 OR51V1Q9H2C8 321 aa16.68■□□□□ 0.26
USP39-201ENST00000323701 PROK2Q9HC23 129 aa16.68■□□□□ 0.26
USP39-201ENST00000323701 ANKRD10Q9NXR5 420 aa16.68■□□□□ 0.26
USP39-201ENST00000323701 DCHS1Q96JQ0 3298 aa16.68■□□□□ 0.26
USP39-201ENST00000323701 RIIAD1A6NNX1 92 aa16.67■□□□□ 0.26
USP39-201ENST00000323701 PRR23D1E9PI22 279 aaPredicted RBP16.67■□□□□ 0.26
USP39-201ENST00000323701 G3V3Y1 287 aa16.67■□□□□ 0.26
USP39-201ENST00000323701 IGHEP01854 428 aa16.67■□□□□ 0.26
USP39-201ENST00000323701 PRR23D2P0DMB1 279 aaPredicted RBP16.67■□□□□ 0.26
USP39-201ENST00000323701 GADD45AP24522 165 aa16.67■□□□□ 0.26
USP39-201ENST00000323701 RGS6P49758 472 aa16.67■□□□□ 0.26
USP39-201ENST00000323701 MLF1P58340 268 aa16.67■□□□□ 0.26
USP39-201ENST00000323701 RPS15P62841 145 aaKnown RBP16.67■□□□□ 0.26
USP39-201ENST00000323701 FOXF1Q12946 379 aa16.67■□□□□ 0.26
USP39-201ENST00000323701 SSX1Q16384 188 aa16.67■□□□□ 0.26
USP39-201ENST00000323701 KLHL22Q53GT1 634 aa16.67■□□□□ 0.26
USP39-201ENST00000323701 DPY19L2P2Q6ZN68 376 aa16.67■□□□□ 0.26
USP39-201ENST00000323701 MEPCEQ7L2J0 689 aaKnown RBP16.67■□□□□ 0.26
USP39-201ENST00000323701 ZNF367Q7RTV3 350 aa16.67■□□□□ 0.26
USP39-201ENST00000323701 ESX1Q8N693 406 aa16.67■□□□□ 0.26
USP39-201ENST00000323701 SLC15A4Q8N697 577 aa16.67■□□□□ 0.26
USP39-201ENST00000323701 NLGN4YQ8NFZ3 816 aaPredicted RBP16.67■□□□□ 0.26
USP39-201ENST00000323701 OR51L1Q8NGJ5 315 aa16.67■□□□□ 0.26
USP39-201ENST00000323701 OR51G2Q8NGK0 314 aa16.67■□□□□ 0.26
USP39-201ENST00000323701 NDNFQ8TB73 568 aa16.67■□□□□ 0.26
USP39-201ENST00000323701 SLC25A36Q96CQ1 311 aa16.67■□□□□ 0.26
USP39-201ENST00000323701 ARL5BQ96KC2 179 aa16.67■□□□□ 0.26
USP39-201ENST00000323701 Q96M85 177 aa16.67■□□□□ 0.26
USP39-201ENST00000323701 NMNAT3Q96T66 252 aa16.67■□□□□ 0.26
USP39-201ENST00000323701 IL17BQ9UHF5 180 aa16.67■□□□□ 0.26
USP39-201ENST00000323701 ERGIC3Q9Y282 383 aa16.67■□□□□ 0.26
USP39-201ENST00000323701 YARS2Q9Y2Z4 477 aaKnown RBP16.67■□□□□ 0.26
USP39-201ENST00000323701 J3QRE1 110 aa16.67■□□□□ 0.26
USP39-201ENST00000323701 SERPINI2O75830 405 aa16.67■□□□□ 0.26
USP39-201ENST00000323701 HK1P19367 917 aa16.67■□□□□ 0.26
USP39-201ENST00000323701 SPHARQ15513 63 aa16.67■□□□□ 0.26
USP39-201ENST00000323701 TSTQ16762 297 aaKnown RBP16.67■□□□□ 0.26
USP39-201ENST00000323701 RNLSQ5VYX0 342 aa16.67■□□□□ 0.26
USP39-201ENST00000323701 ARHGAP11AQ6P4F7 1023 aa16.67■□□□□ 0.26
USP39-201ENST00000323701 FAM122BQ7Z309 247 aa16.67■□□□□ 0.26
USP39-201ENST00000323701 OR5M1Q8NGP8 315 aa16.67■□□□□ 0.26
USP39-201ENST00000323701 DDOQ99489 341 aa16.67■□□□□ 0.26
USP39-201ENST00000323701 TEAD3Q99594 435 aa16.67■□□□□ 0.26
USP39-201ENST00000323701 RNF167Q9H6Y7 350 aa16.67■□□□□ 0.26
USP39-201ENST00000323701 TRAV36DV7A0A075B6V5 113 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms