RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 OR6C68A6NDL8 312 aa6.9□□□□□ -1.3
IFT88-201ENST00000319980 TOX3O15405 576 aaPredicted RBP6.9□□□□□ -1.3
IFT88-201ENST00000319980 DLGAP3O95886 979 aa6.9□□□□□ -1.3
IFT88-201ENST00000319980 F13BP05160 661 aa6.9□□□□□ -1.3
IFT88-201ENST00000319980 PYCR1P32322 319 aa6.9□□□□□ -1.3
IFT88-201ENST00000319980 E2F1Q01094 437 aa6.9□□□□□ -1.3
IFT88-201ENST00000319980 BDH1Q02338 343 aa6.9□□□□□ -1.3
IFT88-201ENST00000319980 GUCA2AQ02747 115 aa6.9□□□□□ -1.3
IFT88-201ENST00000319980 ZNF85Q03923 595 aa6.9□□□□□ -1.3
IFT88-201ENST00000319980 SLC3A1Q07837 685 aa6.9□□□□□ -1.3
IFT88-201ENST00000319980 NR0B2Q15466 257 aa6.9□□□□□ -1.3
IFT88-201ENST00000319980 ZNF74Q16587 644 aa6.9□□□□□ -1.3
IFT88-201ENST00000319980 DDI2Q5TDH0 399 aa6.9□□□□□ -1.3
IFT88-201ENST00000319980 YOD1Q5VVQ6 348 aaPredicted RBP6.9□□□□□ -1.3
IFT88-201ENST00000319980 PMS2CLQ68D20 193 aa6.9□□□□□ -1.3
IFT88-201ENST00000319980 C16orf47Q6ZP98 133 aaPredicted RBP6.9□□□□□ -1.3
IFT88-201ENST00000319980 COX15Q7KZN9 410 aa6.9□□□□□ -1.3
IFT88-201ENST00000319980 RFLNBQ8N5W9 214 aa6.9□□□□□ -1.3
IFT88-201ENST00000319980 NPEPL1Q8NDH3 523 aa6.9□□□□□ -1.3
IFT88-201ENST00000319980 OR6K6Q8NGW6 343 aa6.9□□□□□ -1.3
IFT88-201ENST00000319980 ZPLD1Q8TCW7 415 aa6.9□□□□□ -1.3
IFT88-201ENST00000319980 RELTQ969Z4 430 aa6.9□□□□□ -1.3
IFT88-201ENST00000319980 OMA1Q96E52 524 aa6.9□□□□□ -1.3
IFT88-201ENST00000319980 KTI12Q96EK9 354 aaPredicted RBP6.9□□□□□ -1.3
IFT88-201ENST00000319980 DIRAS2Q96HU8 199 aa6.9□□□□□ -1.3
IFT88-201ENST00000319980 FRMD6Q96NE9 622 aa6.9□□□□□ -1.3
IFT88-201ENST00000319980 INPP5EQ9NRR6 644 aa6.9□□□□□ -1.3
IFT88-201ENST00000319980 PILRBQ9UKJ0 227 aa6.9□□□□□ -1.3
IFT88-201ENST00000319980 SRPK3Q9UPE1 567 aa6.9□□□□□ -1.3
IFT88-201ENST00000319980 V9GYH0 126 aa6.9□□□□□ -1.3
IFT88-201ENST00000319980 ASCC3Q8N3C0 2202 aaKnown RBP6.9□□□□□ -1.3
IFT88-201ENST00000319980 CCDC163A0A0D9SF12 145 aa6.9□□□□□ -1.3
IFT88-201ENST00000319980 LY6G6EA0A0G2JKS1 128 aa6.9□□□□□ -1.3
IFT88-201ENST00000319980 C4orf47A7E2U8 309 aa6.9□□□□□ -1.3
IFT88-201ENST00000319980 FAM171A2A8MVW0 826 aa6.9□□□□□ -1.3
IFT88-201ENST00000319980 IDSB3KWA1 339 aa6.9□□□□□ -1.3
IFT88-201ENST00000319980 ARPC3O15145 178 aa6.9□□□□□ -1.3
IFT88-201ENST00000319980 SCO2O43819 266 aa6.9□□□□□ -1.3
IFT88-201ENST00000319980 FBXO45P0C2W1 286 aa6.9□□□□□ -1.3
IFT88-201ENST00000319980 ACVR1BP36896 505 aa6.9□□□□□ -1.3
IFT88-201ENST00000319980 RPS4XP62701 263 aaKnown RBP6.9□□□□□ -1.3
IFT88-201ENST00000319980 ACY1Q03154 408 aa6.9□□□□□ -1.3
IFT88-201ENST00000319980 POU4F2Q12837 409 aa6.9□□□□□ -1.3
IFT88-201ENST00000319980 NKAIN1Q4KMZ8 207 aa6.9□□□□□ -1.3
IFT88-201ENST00000319980 PWWP2BQ6NUJ5 590 aa6.9□□□□□ -1.3
IFT88-201ENST00000319980 LYPD4Q6UWN0 246 aa6.9□□□□□ -1.3
IFT88-201ENST00000319980 FAM131AQ6UXB0 335 aa6.9□□□□□ -1.3
IFT88-201ENST00000319980 PRR23CQ6ZRP0 262 aa6.9□□□□□ -1.3
IFT88-201ENST00000319980 GPALPP1Q8IXQ4 340 aa6.9□□□□□ -1.3
IFT88-201ENST00000319980 CADM3Q8N126 398 aa6.9□□□□□ -1.3
IFT88-201ENST00000319980 EID2Q8N6I1 236 aa6.9□□□□□ -1.3
IFT88-201ENST00000319980 C17orf47Q8NEP4 570 aa6.9□□□□□ -1.3
IFT88-201ENST00000319980 AP3S1Q92572 193 aa6.9□□□□□ -1.3
IFT88-201ENST00000319980 Q96M85 177 aa6.9□□□□□ -1.3
IFT88-201ENST00000319980 NEURL2Q9BR09 285 aa6.9□□□□□ -1.3
IFT88-201ENST00000319980 LAT2Q9GZY6 243 aa6.9□□□□□ -1.3
IFT88-201ENST00000319980 MIXL1Q9H2W2 232 aa6.9□□□□□ -1.3
IFT88-201ENST00000319980 GAREM1Q9H706 876 aa6.9□□□□□ -1.3
IFT88-201ENST00000319980 MMP25Q9NPA2 562 aa6.9□□□□□ -1.3
IFT88-201ENST00000319980 TIGARQ9NQ88 270 aa6.9□□□□□ -1.3
IFT88-201ENST00000319980 GRIP1Q9Y3R0 1128 aa6.9□□□□□ -1.3
IFT88-201ENST00000319980 U3KQA8 63 aa6.9□□□□□ -1.3
IFT88-201ENST00000319980 ZDBF2Q9HCK1 2354 aa6.9□□□□□ -1.31
IFT88-201ENST00000319980 TEX13CA0A0J9YWL9 993 aa6.9□□□□□ -1.31
IFT88-201ENST00000319980 IGHV5-10-1A0A0J9YXX1 117 aa6.9□□□□□ -1.31
IFT88-201ENST00000319980 FABP12A6NFH5 140 aa6.9□□□□□ -1.31
IFT88-201ENST00000319980 ALG1L2C9J202 215 aa6.9□□□□□ -1.31
IFT88-201ENST00000319980 TSPAN2O60636 221 aa6.9□□□□□ -1.31
IFT88-201ENST00000319980 SCRG1O75711 98 aa6.9□□□□□ -1.31
IFT88-201ENST00000319980 TFP02787 698 aa6.9□□□□□ -1.31
IFT88-201ENST00000319980 PNLIPP16233 465 aa6.9□□□□□ -1.31
IFT88-201ENST00000319980 RPS5P46782 204 aaKnown RBP6.9□□□□□ -1.31
IFT88-201ENST00000319980 DEFA1P59665 94 aa6.9□□□□□ -1.31
IFT88-201ENST00000319980 DEFA3P59666 94 aa6.9□□□□□ -1.31
IFT88-201ENST00000319980 CTXN1P60606 82 aa6.9□□□□□ -1.31
IFT88-201ENST00000319980 ACTC1P68032 377 aa6.9□□□□□ -1.31
IFT88-201ENST00000319980 ACTA1P68133 377 aa6.9□□□□□ -1.31
IFT88-201ENST00000319980 LTBQ06643 244 aa6.9□□□□□ -1.31
IFT88-201ENST00000319980 GPR50Q13585 617 aa6.9□□□□□ -1.31
IFT88-201ENST00000319980 ZNF79Q15937 498 aa6.9□□□□□ -1.31
IFT88-201ENST00000319980 TP53I3Q53FA7 332 aa6.9□□□□□ -1.31
IFT88-201ENST00000319980 ALG10Q5BKT4 473 aa6.9□□□□□ -1.31
IFT88-201ENST00000319980 VASH1Q7L8A9 365 aaPredicted RBP6.9□□□□□ -1.31
IFT88-201ENST00000319980 KANSL1Q7Z3B3 1105 aa6.9□□□□□ -1.31
IFT88-201ENST00000319980 PLPP5Q8NEB5 264 aa6.9□□□□□ -1.31
IFT88-201ENST00000319980 C7orf57Q8NEG2 295 aa6.9□□□□□ -1.31
IFT88-201ENST00000319980 OR5J2Q8NH18 312 aa6.9□□□□□ -1.31
IFT88-201ENST00000319980 OIT3Q8WWZ8 545 aa6.9□□□□□ -1.31
IFT88-201ENST00000319980 WDFY2Q96P53 400 aa6.9□□□□□ -1.31
IFT88-201ENST00000319980 TSSK2Q96PF2 358 aa6.9□□□□□ -1.31
IFT88-201ENST00000319980 TMEM43Q9BTV4 400 aa6.9□□□□□ -1.31
IFT88-201ENST00000319980 CCDC32Q9BV29 185 aa6.9□□□□□ -1.31
IFT88-201ENST00000319980 KCNN2Q9H2S1 579 aa6.9□□□□□ -1.31
IFT88-201ENST00000319980 CCDC86Q9H6F5 360 aaKnown RBP6.9□□□□□ -1.31
IFT88-201ENST00000319980 SP140LQ9H930 580 aa6.9□□□□□ -1.31
IFT88-201ENST00000319980 SUSD2Q9UGT4 822 aa6.9□□□□□ -1.31
IFT88-201ENST00000319980 KLHL21Q9UJP4 597 aa6.9□□□□□ -1.31
IFT88-201ENST00000319980 POLHQ9Y253 713 aa6.9□□□□□ -1.31
IFT88-201ENST00000319980 HIF3AQ9Y2N7 669 aa6.9□□□□□ -1.31
IFT88-201ENST00000319980 LINC00854A0A1B0GVQ3 168 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms